Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000220-TA|BGIBMGA000220-PA|IPR003439|ABC transporter
related, IPR013525|ABC-2 type transporter
(823 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 88 4e-18
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 67 8e-12
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 34 0.092
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 32 0.37
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 32 0.37
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 31 0.65
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 31 0.85
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 30 1.1
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 30 1.5
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 29 2.6
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 28 4.6
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 28 4.6
SPBC18E5.12c |mas2|SPBC23G7.02c|mitochondrial processing peptida... 28 4.6
SPCC126.02c |pku70||Ku domain protein Pku70|Schizosaccharomyces ... 28 4.6
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 27 8.0
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 88.2 bits (209), Expect = 4e-18
Identities = 66/244 (27%), Positives = 125/244 (51%), Gaps = 11/244 (4%)
Query: 219 VVSGLSFEVKCGEILAVLATAQHEATGLLDVLAGVRKK--LSGDIVINGQPVASSTLRKV 276
+++G+ V G++ A++ + T LL+VLA ++GD+++NG+ + ST ++
Sbjct: 900 LLNGVQGFVVPGKLTALMGESGAGKTTLLNVLAQRVDTGVVTGDMLVNGRGL-DSTFQRR 958
Query: 277 VAYVRNDTALCPTMSVEHTLRFHAALRKPRNTHSHVKMGDRDRINLLIE-ELGLEQVRDT 335
YV+ +V LRF AALR+P + K + + L+E E E + T
Sbjct: 959 TGYVQQQDVHIGESTVREALRFSAALRQPASVPLSEKYEYVESVIKLLEMESYAEAIIGT 1018
Query: 336 NVGRLTRSEIRRLNVACQLLLDMAILI-LDQPTKEMDIFDTFFLVEYLRNWASTGRVVIM 394
L + +R + +L A+L+ LD+PT +D + +V +LR A G+ ++
Sbjct: 1019 PGSGLNVEQRKRATIGVELAAKPALLLFLDEPTSGLDSQSAWSIVCFLRKLADAGQAILC 1078
Query: 395 SLHPPTYEIFAMLTKVVLI-SAGRTMFSG----YRRDMLPYFSSID-YPCPAFKNPSDYY 448
++H P+ +F +++L+ G+T++ G + + +L YF S CP NP++Y
Sbjct: 1079 TIHQPSAVLFDQFDRLLLLQKGGKTVYFGDIGEHSKTLLNYFESHGAVHCPDDGNPAEYI 1138
Query: 449 LDLV 452
LD++
Sbjct: 1139 LDVI 1142
Score = 43.2 bits (97), Expect = 1e-04
Identities = 36/169 (21%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 288 PTMSVEHTLRFHAALRKPRNTHSHVKMGD---RDRINLLIEELGLEQVRDTNVGR----- 339
P+++ TL F A R P N ++ + R+R +L+ GL +T VG
Sbjct: 250 PSLTTAETLDFAAKCRTPNNRPCNLTRQEYVSRER-HLIATAFGLTHTFNTKVGNDFVRG 308
Query: 340 LTRSEIRRLNVACQLLLDMAILILDQPTKEMDIFDTFFLVEYLRNWASTGRVV-IMSLHP 398
++ E +R+ ++ I D T+ +D F V LR A+ ++ ++ +
Sbjct: 309 VSGGERKRVTISEGFATRPTIACWDNSTRGLDSSTAFEFVNVLRTCANELKMTSFVTAYQ 368
Query: 399 PTYEIFAMLTKVVLISAGRTMFSGYRRDMLPYFSSIDYPCPAFKNPSDY 447
+ +I+ + ++ ++ AGR ++ G YF + + C + D+
Sbjct: 369 ASEKIYKLFDRICVLYAGRQIYYGPADKAKQYFLDMGFDCHPRETTPDF 417
Score = 29.5 bits (63), Expect = 2.0
Identities = 28/133 (21%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Query: 587 RDIAVGLYSRTVFILYDQFIEV----LSAILTWLAYLVPSYAMSGLYAPTPGAFDAFYIY 642
R+ +YS F+ +E+ + L +L + P ++ P A+ +Y
Sbjct: 1284 REKPSNIYSWVAFVFSAIIVEIPFNLVFGTLFFLCWFYPIKFYKHIHHPGDKTGYAWLLY 1343
Query: 643 LGCMVLFFINIQMVCRATIFLVPMEKTASVIAGVCLLLGTLVNGVMIQQADLPYYVKWLQ 702
+ + F Q V A P +TASV+ + NGV+ ++L + W+
Sbjct: 1344 MFFQMYFSTFGQAVASAC----PNAQTASVVNSLLFTFVITFNGVLQPNSNLVGFWHWMH 1399
Query: 703 YVSPSRWTIPEIL 715
++P + I +L
Sbjct: 1400 SLTPFTYLIEGLL 1412
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 67.3 bits (157), Expect = 8e-12
Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 18/261 (6%)
Query: 204 VNSLEITSPENKSTLVVSGLSFEVKCGEILAVLATAQHEATGLLDVLA--GVRKKLSGDI 261
+N +T K +++ +S +K + A+L + + LL +L+ G+ + G+I
Sbjct: 763 LNFTVVTKTSKKQ--ILTNVSGYLKKNTLTALLGENKSGKSVLLRILSQRGIAGSVEGEI 820
Query: 262 VINGQPVASSTLRKVVAYVRNDTALCPTMSVEHTLRFHAALRKPRNTHSHVKMGDRDRIN 321
++G + LRK + YVR + +V TLR HAALR+ + + +
Sbjct: 821 TLSGLKNPKN-LRKRIGYVRKNPLFISEYTVRETLRLHAALRQSKQRSLSEQYA---YVE 876
Query: 322 LLIEELGLEQVRDTNVGRLTRS----EIRRLNVACQL-LLDMAILILDQPTKEMDIFDTF 376
+I+ LGL +V D VG + + R L++A +L +IL+LD+P +D +
Sbjct: 877 YVIDFLGLGEVADFIVGDMGKGLSLYHKRLLSIAVELSARPGSILLLDEPANGLDSQSAW 936
Query: 377 FLVEYLRNWASTGRVVIMSLHPPTYEIFAMLTKVVLISA-GRTM-FSGYRRD---MLPYF 431
LV L+ A +G ++ S+ P+ I + ++++ G T+ + RD ++ YF
Sbjct: 937 MLVCILQKLARSGLSILCSVSQPSSRILELFDMMLILDLNGNTVYYDTMGRDLSKLVNYF 996
Query: 432 SSIDYPCPAFKNPSDYYLDLV 452
I K+ +D+ L +
Sbjct: 997 KRIHGTNEHSKDTADFVLHCI 1017
Score = 32.3 bits (70), Expect = 0.28
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 580 SMRKHVERDIAVGLYSRTVFILYDQFIEVLSAILTWLAYLVPSYAMSGLYA-----PTPG 634
S+ + E++ A+ YSRT FI+ +E + + Y SG Y P G
Sbjct: 1149 SIYEQYEQNTAI--YSRTAFIIAFFLVEAVINCCFATLFFFGWYYPSGFYEFNHNIPFYG 1206
Query: 635 AFDAFYIYLGCMVLFFINIQMVCRATIFLVPMEKTASVIAGVCLLLGTLVNGVMIQQADL 694
F ++ L L++ + + ATI P TAS+I+G + NG++ +
Sbjct: 1207 GFA--WLMLMIFTLYYTTLGIGI-ATIS--PSIGTASIISGTAFVFIQYFNGMIQLPGVI 1261
Query: 695 PYYVKWLQYVSPSRW 709
+ KW+ +SP ++
Sbjct: 1262 VGFWKWMDALSPYKY 1276
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 33.9 bits (74), Expect = 0.092
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 312 VKMGDRDRINLLIEELGL-EQVRDTNVGRLTRSEIRRLNVACQLLLDMAILILDQPTKEM 370
V + DRD I ++E +++ + +G L+ +L + + + IL+LD+PT +
Sbjct: 520 VPIKDRDEIVKALKENSFTDELINMPIGSLSGGWKMKLALTRAMFKNPDILLLDEPTNHL 579
Query: 371 DIFDTFFLVEYLRNWASTGRVVI 393
D+ + +L +L N +++
Sbjct: 580 DVVNVAWLENFLVNQKDVSSIIV 602
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 31.9 bits (69), Expect = 0.37
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 323 LIEELGLEQVRDTNVGRLTRSEIRRLNVACQLLLDMA-ILILDQPTKEMDIFDTFFLVEY 381
++ + GL + T+ R ++ V L L+ IL+LD+PT +DI L +
Sbjct: 495 VLGKFGLSGLHQTSEIRTLSDGLKSRVVFAALALEQPHILLLDEPTNHLDITSIDALAKA 554
Query: 382 LRNWASTGRVVIMS 395
+ W TG VV++S
Sbjct: 555 INVW--TGGVVLVS 566
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/51 (25%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 347 RLNVACQLLLDMAILILDQPTKEMDIFDTFFLVEYLRNWASTGRVVIMSLH 397
R+ ++ L + ++L+LD+PT +D+ +L YL A ++++++ H
Sbjct: 228 RVALSRALFIKPSLLLLDEPTNHLDLEAVVWLENYL---AKYDKILVVTSH 275
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 31.9 bits (69), Expect = 0.37
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 347 RLNVACQLLLDMAILILDQPTKEMDIFDTFFLVEYLRNWASTGRVV 392
RL++A L +L+LD+P+ +D+ FL EYL+ + + VV
Sbjct: 362 RLSLARALFCQPDLLLLDEPSNMLDVPSIAFLSEYLQTYKNIVLVV 407
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 31.1 bits (67), Expect = 0.65
Identities = 38/187 (20%), Positives = 82/187 (43%), Gaps = 10/187 (5%)
Query: 219 VVSGLSFEVKCGEILAVLATAQHEATGLLDVLAGVRKKL-SGDIVINGQPVASSTLRKVV 277
V+S +++ ++ GE A+ + T LL + G KL + +I G+ + T +
Sbjct: 279 VLSDINWTIREGERWALTGSNGSGKTTLLAYVVGDHPKLFASNIKFFGKSIGPGTGISIF 338
Query: 278 AYVRNDTALCPTMS----VEHTLRFHAALRKPRNTHSHVKMGDRD--RINLLIEELGLEQ 331
N P + +HT F A L T + K+ + I+ ++EE L+
Sbjct: 339 DIQENIGHCSPEIHNHFPKQHTC-FEALLSAWSTTFTIPKLTETRLAAISSILEEFELKD 397
Query: 332 VRDTNVGRLTRSEIRRLNVACQLLLDMA-ILILDQPTKEMDIFDTFFLVEYLRNWASTGR 390
++D + ++ ++R + C+ ++ +++LD+P + +D YL S +
Sbjct: 398 IKDKPLSSISVG-MQRFILFCRAIVKQPRLVVLDEPFQGVDTKYVHMAHNYLNEKLSPSQ 456
Query: 391 VVIMSLH 397
+++ H
Sbjct: 457 AMVIISH 463
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 329 LEQVRDTNVGRLTRSEIRRLNVACQLLLDMAILILDQPTKEMDIFDTFFLVEYLRNWAS- 387
L + +++ L+ + RR +A +L+ +L+LD+P +D+ L L ++
Sbjct: 138 LSHLLPSSLINLSNGQSRRAMLASKLVQRPQLLLLDEPYAGLDVTSRSVLSSLLGEMSNH 197
Query: 388 TGRVVIMSLHPPTYEIFAMLTKVVLISAGRTMFSGYRRDMLPYFS 432
+++SL P +I +T V+ + + + G + +P S
Sbjct: 198 CSPKIVLSLRPQD-KIPDFITHVLELKNKKITYQGPKEQYIPMTS 241
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 30.7 bits (66), Expect = 0.85
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 323 LIEELGL--EQVRDT--NVGRLTRSEIRRLNVACQLLLDMAILILDQPTKEMDIFDTFFL 378
L++E L +Q DT L+ + +R+ +A LL D ILILD+PT +D +
Sbjct: 550 LVDEFALTFDQSYDTPCKEASLSGGQQQRIALARALLRDTEILILDEPTSALDPITKNLV 609
Query: 379 VEYLR 383
++ +R
Sbjct: 610 MDAIR 614
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/75 (21%), Positives = 35/75 (46%)
Query: 323 LIEELGLEQVRDTNVGRLTRSEIRRLNVACQLLLDMAILILDQPTKEMDIFDTFFLVEYL 382
+++ L+ + + VG L+ E++R +A + + D+P+ +DI +
Sbjct: 203 VMDHTDLQNLLNREVGHLSGGELQRFAIAAVATQKADVYMFDEPSSYLDIKQRLKAGRVI 262
Query: 383 RNWASTGRVVIMSLH 397
R+ +T VI+ H
Sbjct: 263 RSLLATTNYVIVVEH 277
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 331 QVRDTNVGRLTRSEIRRLNVACQLLLDMAILILDQPTKEMDIFDTFFLVEYL 382
++++ V L+ +L +A +L IL+LD+PT +D+ + +L YL
Sbjct: 554 EMQENPVASLSGGWKMKLELARAMLQKADILLLDEPTNHLDVANIAWLEAYL 605
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 347 RLNVACQLLLDMAILILDQPTKEMDIFDTFFLVEYLRNWASTGRVVIMSLH 397
R+ +A L + +++LD+PT +D+ +L EYL + G ++++ H
Sbjct: 428 RIALARILFIKPTLMMLDEPTNHLDLEAVAWLEEYLTH-EMEGHTLLITCH 477
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 337 VGRLTRSEIRRLNVACQLLLDMAILILDQPTKEMDIFDTFFLVEYLRNW 385
+G+L+ + RR+ A + IL+LD+PT +DI L + L N+
Sbjct: 710 MGQLSDGQRRRVLFAFLGMTQPHILLLDEPTNALDIDTIDALADALNNF 758
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 712 PEILRRELSETVLRNSISKDLRCTNKQRPYPDIIVQSP 749
P+I R EL +V + +SK L KQRP +++ P
Sbjct: 598 PKISRPELLSSVFHDFLSKSLTVNPKQRPSSGELLRHP 635
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 28.3 bits (60), Expect = 4.6
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 9 LPRVFPPNHNGSQRSGTPKPKTSIGSGMKPVQRIHRQSRGVRETSSGYDSSD-NETTANY 67
LPR P + S +S TP T+I G+ ++ + +++ S SS +E +A+
Sbjct: 210 LPRSLPADVIESAKSETPAMNTNIEQGVTQPSLVNTEQLSHQQSISSTKSSKLDEISADN 269
Query: 68 NKYS---RKYRSDP 78
N S KY S P
Sbjct: 270 NAQSAVDNKYSSPP 283
>SPBC18E5.12c |mas2|SPBC23G7.02c|mitochondrial processing peptidase
complex alpha subunit Mas2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 494
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 679 LLGTLVNGVMIQQADLPYYVKWLQYVSPSRWTIPEILRRELSETVL--RNSISKDLRCT 735
LL V IQ+ DL +Y + Y + WT P+ L E + N++ L CT
Sbjct: 144 LLAETVLAPKIQEDDLVHYRDSIIYENSELWTKPDALLGEFAHVTAFQNNTLGNCLLCT 202
>SPCC126.02c |pku70||Ku domain protein Pku70|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 607
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 292 VEHTLRFHAALRKPRNTHSHVKMGDRDRINLLIE 325
++H L AL+KP+ H H+KM + + + +E
Sbjct: 219 LQHMLNMITALQKPKRAHFHLKMDLGNDVRIGVE 252
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 27.5 bits (58), Expect = 8.0
Identities = 32/141 (22%), Positives = 56/141 (39%), Gaps = 13/141 (9%)
Query: 165 MSKAGSHMSVAHSRKHSTLRPGDQLDGYAHSAYIYPNYYVNSLEITSPENKSTLVVSGLS 224
M+ GS ++ + + STL D+ + + + ++ + SPE +L +G S
Sbjct: 90 MTSLGSKVTSKNYNEFSTLEEEDEHNSHGVDVSAWAHFSL------SPEMLGSLSKAGFS 143
Query: 225 FEVKCGEILAVLATAQHEATGLLDVLAGVRKKLSGDIVINGQPVASSTLRKVVAYVRNDT 284
+ ++ A+ + G D G SG + G P+ LR V A
Sbjct: 144 KPMPIQSLVIPEASIGFDIIGKADT--G-----SGKTLAFGIPILEHCLRNVDAKYVQAL 196
Query: 285 ALCPTMSVEHTLRFHAALRKP 305
+ PT + H + H L KP
Sbjct: 197 VVAPTRELAHQICQHFELIKP 217
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.322 0.136 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,558,944
Number of Sequences: 5004
Number of extensions: 146275
Number of successful extensions: 437
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 416
Number of HSP's gapped (non-prelim): 24
length of query: 823
length of database: 2,362,478
effective HSP length: 79
effective length of query: 744
effective length of database: 1,967,162
effective search space: 1463568528
effective search space used: 1463568528
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)
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