GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000219-TA|BGIBMGA000219-PA|IPR003957|Histone-like
transcription factor/archaeal histone/DNA topoisomerase,
IPR003958|Transcription factor CBF/NF-Y/archaeal histone,
IPR009072|Histone-fold
         (196 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    26   0.87 
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   2.0  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    24   3.5  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   4.6  
Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.        23   8.1  
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    23   8.1  
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    23   8.1  

>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 25.8 bits (54), Expect = 0.87
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 53  RFLPIANIAKIMKRAIPENGKIAKDARE 80
           +F PI     IMKR +   GK+ KD  +
Sbjct: 272 QFRPIEKYWAIMKRRLKAKGKVVKDINQ 299


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 148 NKLNKTIVLYSEDGTACVSNENEIDTQTESTILYVPTTYP 187
           ++LN TI+   E  + C + E  +D +  +     PT  P
Sbjct: 48  DELNSTIIAMPEPASECEAAEAAMDLEPPAAAQPTPTASP 87


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 67  AIPENGKIAKDARECVQECISEFISFVTSEASD 99
           A+P    + + A  C +E   EF+ F++S A D
Sbjct: 382 ALPRTHILKELAEYCGEEKDKEFLRFISSTAPD 414


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 22  DTFVVNSDDVLEDENNSDSGSKSNAPLRE 50
           D  V N DDV + E + +    SN P+ +
Sbjct: 90  DLQVANVDDVEDSEGSHEPDGASNTPVTD 118


>Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.
          Length = 91

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 89  FISFVTSEASDRCKVEKRKTINGEDVLFAL 118
           F+  V  +A    +  KRKT+   DV++AL
Sbjct: 62  FLENVIRDAVAYTEHAKRKTVTAMDVVYAL 91


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 3/44 (6%)

Query: 156 LYSEDGTACVSNENEIDTQTESTILYVPTTYPKV---VEEFILT 196
           LYS    + V+  N I  +T S +    T+ PK+   + E+ LT
Sbjct: 133 LYSTPQISMVNFTNRIGDETSSILTTTHTSVPKMCAKIGEYCLT 176


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 71  NGKIAKDARECVQECISEFISFVTSEAS 98
           N +  + ARECV E +++    V+ E+S
Sbjct: 334 NQEAQRKARECVLEALAKHDGVVSYESS 361


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.133    0.368 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,354
Number of Sequences: 2123
Number of extensions: 8181
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 7
length of query: 196
length of database: 516,269
effective HSP length: 61
effective length of query: 135
effective length of database: 386,766
effective search space: 52213410
effective search space used: 52213410
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 46 (22.6 bits)