Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000219-TA|BGIBMGA000219-PA|IPR003957|Histone-like
transcription factor/archaeal histone/DNA topoisomerase,
IPR003958|Transcription factor CBF/NF-Y/archaeal histone,
IPR009072|Histone-fold
(196 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59710-1|CAA42230.1| 205|Homo sapiens CAAT-box DNA binding prot... 168 1e-41
L06145-1|AAA59930.1| 207|Homo sapiens CCAAT-box DNA binding pro... 168 1e-41
BC005317-1|AAH05317.1| 207|Homo sapiens nuclear transcription f... 168 1e-41
BC005316-1|AAH05316.1| 207|Homo sapiens nuclear transcription f... 168 1e-41
BC007035-1|AAH07035.1| 207|Homo sapiens nuclear transcription f... 167 2e-41
M97388-1|AAA58442.1| 176|Homo sapiens TATA binding protein-asso... 72 2e-12
BT006972-1|AAP35618.1| 176|Homo sapiens down-regulator of trans... 72 2e-12
BC068553-1|AAH68553.1| 176|Homo sapiens DR1 protein protein. 72 2e-12
BC035507-1|AAH35507.1| 176|Homo sapiens down-regulator of trans... 72 2e-12
BC002809-1|AAH02809.1| 176|Homo sapiens down-regulator of trans... 72 2e-12
AL137159-1|CAC17578.1| 176|Homo sapiens down-regulator of trans... 72 2e-12
AK223442-1|BAD97162.1| 176|Homo sapiens down-regulator of trans... 72 2e-12
DQ072116-1|AAY57326.1| 147|Homo sapiens polymerase (DNA directe... 69 1e-11
BC004170-1|AAH04170.1| 147|Homo sapiens polymerase (DNA directe... 69 1e-11
BC003166-1|AAH03166.1| 147|Homo sapiens polymerase (DNA directe... 69 1e-11
AL137066-5|CAH70100.1| 147|Homo sapiens polymerase (DNA directe... 69 1e-11
AK074629-1|BAC11099.1| 147|Homo sapiens protein ( Homo sapiens ... 69 1e-11
AF261689-1|AAF90133.1| 147|Homo sapiens DNA polymerase epsilon ... 69 1e-11
AF226077-1|AAF72417.1| 147|Homo sapiens CHRAC17 protein. 69 1e-11
AY720898-1|AAU15052.1| 147|Homo sapiens arsenic transactivated ... 69 1e-11
AK074782-1|BAC11206.1| 147|Homo sapiens protein ( Homo sapiens ... 69 1e-11
AK074762-1|BAC11190.1| 147|Homo sapiens protein ( Homo sapiens ... 68 2e-11
Z22969-1|CAA80542.1| 1151|Homo sapiens M130 antigen cytoplasmic ... 30 4.6
BC051281-1|AAH51281.1| 1156|Homo sapiens CD163 molecule protein. 30 4.6
AF005043-1|AAB61614.1| 976|Homo sapiens poly(ADP-ribose) glycoh... 30 4.6
DQ867088-1|ABH85399.1| 976|Homo sapiens poly (ADP-ribose) glyco... 30 6.0
BC052966-1|AAH52966.1| 976|Homo sapiens PARG protein protein. 30 6.0
BC050560-1|AAH50560.1| 976|Homo sapiens poly (ADP-ribose) glyco... 30 6.0
AY575849-1|AAT66422.1| 868|Homo sapiens poly (ADP-ribose) glyco... 30 6.0
AY575848-1|AAT66421.1| 894|Homo sapiens poly (ADP-ribose) glyco... 30 6.0
AY258587-1|AAP83314.1| 976|Homo sapiens poly(ADP-ribose) glycoh... 30 6.0
>X59710-1|CAA42230.1| 205|Homo sapiens CAAT-box DNA binding protein
subunit B (NF-YB) protein.
Length = 205
Score = 168 bits (409), Expect = 1e-41
Identities = 81/141 (57%), Positives = 104/141 (73%), Gaps = 2/141 (1%)
Query: 1 MDSDELGNDLVRLD-NGFLVADDTFVVNSDDVLEDE-NNSDSGSKSNAPLREQDRFLPIA 58
MD D D +L + + +V+ D ED N+ + + S REQD +LPIA
Sbjct: 1 MDGDSSTTDASQLGISADYIGGSHYVIQPHDDTEDSMNDHEDTNGSKESFREQDIYLPIA 60
Query: 59 NIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTINGEDVLFAL 118
N+A+IMK AIP+ GKIAKDA+ECVQEC+SEFISF+TSEAS+RC EKRKTINGED+LFA+
Sbjct: 61 NVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAM 120
Query: 119 NTLGFDNYVKPLRLYLTKYRE 139
+TLGFD+YV+PL+LYL K+RE
Sbjct: 121 STLGFDSYVEPLKLYLQKFRE 141
>L06145-1|AAA59930.1| 207|Homo sapiens CCAAT-box DNA binding
protein subunit NF-YB. protein.
Length = 207
Score = 168 bits (409), Expect = 1e-41
Identities = 81/141 (57%), Positives = 104/141 (73%), Gaps = 2/141 (1%)
Query: 1 MDSDELGNDLVRLD-NGFLVADDTFVVNSDDVLEDE-NNSDSGSKSNAPLREQDRFLPIA 58
MD D D +L + + +V+ D ED N+ + + S REQD +LPIA
Sbjct: 3 MDGDSSTTDASQLGISADYIGGSHYVIQPHDDTEDSMNDHEDTNGSKESFREQDIYLPIA 62
Query: 59 NIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTINGEDVLFAL 118
N+A+IMK AIP+ GKIAKDA+ECVQEC+SEFISF+TSEAS+RC EKRKTINGED+LFA+
Sbjct: 63 NVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAM 122
Query: 119 NTLGFDNYVKPLRLYLTKYRE 139
+TLGFD+YV+PL+LYL K+RE
Sbjct: 123 STLGFDSYVEPLKLYLQKFRE 143
>BC005317-1|AAH05317.1| 207|Homo sapiens nuclear transcription
factor Y, beta protein.
Length = 207
Score = 168 bits (409), Expect = 1e-41
Identities = 81/141 (57%), Positives = 104/141 (73%), Gaps = 2/141 (1%)
Query: 1 MDSDELGNDLVRLD-NGFLVADDTFVVNSDDVLEDE-NNSDSGSKSNAPLREQDRFLPIA 58
MD D D +L + + +V+ D ED N+ + + S REQD +LPIA
Sbjct: 3 MDGDSSTTDASQLGISADYIGGSHYVIQPHDDTEDSMNDHEDTNGSKESFREQDIYLPIA 62
Query: 59 NIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTINGEDVLFAL 118
N+A+IMK AIP+ GKIAKDA+ECVQEC+SEFISF+TSEAS+RC EKRKTINGED+LFA+
Sbjct: 63 NVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAM 122
Query: 119 NTLGFDNYVKPLRLYLTKYRE 139
+TLGFD+YV+PL+LYL K+RE
Sbjct: 123 STLGFDSYVEPLKLYLQKFRE 143
>BC005316-1|AAH05316.1| 207|Homo sapiens nuclear transcription
factor Y, beta protein.
Length = 207
Score = 168 bits (409), Expect = 1e-41
Identities = 81/141 (57%), Positives = 104/141 (73%), Gaps = 2/141 (1%)
Query: 1 MDSDELGNDLVRLD-NGFLVADDTFVVNSDDVLEDE-NNSDSGSKSNAPLREQDRFLPIA 58
MD D D +L + + +V+ D ED N+ + + S REQD +LPIA
Sbjct: 3 MDGDSSTTDASQLGISADYIGGSHYVIQPHDDTEDSMNDHEDTNGSKESFREQDIYLPIA 62
Query: 59 NIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTINGEDVLFAL 118
N+A+IMK AIP+ GKIAKDA+ECVQEC+SEFISF+TSEAS+RC EKRKTINGED+LFA+
Sbjct: 63 NVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAM 122
Query: 119 NTLGFDNYVKPLRLYLTKYRE 139
+TLGFD+YV+PL+LYL K+RE
Sbjct: 123 STLGFDSYVEPLKLYLQKFRE 143
>BC007035-1|AAH07035.1| 207|Homo sapiens nuclear transcription
factor Y, beta protein.
Length = 207
Score = 167 bits (407), Expect = 2e-41
Identities = 81/141 (57%), Positives = 104/141 (73%), Gaps = 2/141 (1%)
Query: 1 MDSDELGNDLVRLD-NGFLVADDTFVVNSDDVLEDE-NNSDSGSKSNAPLREQDRFLPIA 58
MD D D +L + + +V+ D ED N+ + + S REQD +LPIA
Sbjct: 3 MDGDSSTTDASQLGISADYIGGSHYVMQPHDDTEDSMNDHEDTNGSKESFREQDIYLPIA 62
Query: 59 NIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTINGEDVLFAL 118
N+A+IMK AIP+ GKIAKDA+ECVQEC+SEFISF+TSEAS+RC EKRKTINGED+LFA+
Sbjct: 63 NVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAM 122
Query: 119 NTLGFDNYVKPLRLYLTKYRE 139
+TLGFD+YV+PL+LYL K+RE
Sbjct: 123 STLGFDSYVEPLKLYLQKFRE 143
>M97388-1|AAA58442.1| 176|Homo sapiens TATA binding
protein-associated phosphoprotein protein.
Length = 176
Score = 71.7 bits (168), Expect = 2e-12
Identities = 34/93 (36%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 50 EQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTI 109
+ D +P A I K++K +P N ++A DARE V C +EFI ++SEA++ C ++KTI
Sbjct: 8 DDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 110 NGEDVLFALNTLGFDNYVKPLRLYLTKYREIVM 142
+ E V+ AL +LGF +Y+ ++ L + + + +
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVAL 99
>BT006972-1|AAP35618.1| 176|Homo sapiens down-regulator of
transcription 1, TBP-binding (negative cofactor 2)
protein.
Length = 176
Score = 71.7 bits (168), Expect = 2e-12
Identities = 34/93 (36%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 50 EQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTI 109
+ D +P A I K++K +P N ++A DARE V C +EFI ++SEA++ C ++KTI
Sbjct: 8 DDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 110 NGEDVLFALNTLGFDNYVKPLRLYLTKYREIVM 142
+ E V+ AL +LGF +Y+ ++ L + + + +
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVAL 99
>BC068553-1|AAH68553.1| 176|Homo sapiens DR1 protein protein.
Length = 176
Score = 71.7 bits (168), Expect = 2e-12
Identities = 34/93 (36%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 50 EQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTI 109
+ D +P A I K++K +P N ++A DARE V C +EFI ++SEA++ C ++KTI
Sbjct: 8 DDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 110 NGEDVLFALNTLGFDNYVKPLRLYLTKYREIVM 142
+ E V+ AL +LGF +Y+ ++ L + + + +
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVAL 99
>BC035507-1|AAH35507.1| 176|Homo sapiens down-regulator of
transcription 1, TBP-binding (negative cofactor 2)
protein.
Length = 176
Score = 71.7 bits (168), Expect = 2e-12
Identities = 34/93 (36%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 50 EQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTI 109
+ D +P A I K++K +P N ++A DARE V C +EFI ++SEA++ C ++KTI
Sbjct: 8 DDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 110 NGEDVLFALNTLGFDNYVKPLRLYLTKYREIVM 142
+ E V+ AL +LGF +Y+ ++ L + + + +
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVAL 99
>BC002809-1|AAH02809.1| 176|Homo sapiens down-regulator of
transcription 1, TBP-binding (negative cofactor 2)
protein.
Length = 176
Score = 71.7 bits (168), Expect = 2e-12
Identities = 34/93 (36%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 50 EQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTI 109
+ D +P A I K++K +P N ++A DARE V C +EFI ++SEA++ C ++KTI
Sbjct: 8 DDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 110 NGEDVLFALNTLGFDNYVKPLRLYLTKYREIVM 142
+ E V+ AL +LGF +Y+ ++ L + + + +
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVAL 99
>AL137159-1|CAC17578.1| 176|Homo sapiens down-regulator of
transcription 1, TBP-binding (negative cofactor 2)
protein.
Length = 176
Score = 71.7 bits (168), Expect = 2e-12
Identities = 34/93 (36%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 50 EQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTI 109
+ D +P A I K++K +P N ++A DARE V C +EFI ++SEA++ C ++KTI
Sbjct: 8 DDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 110 NGEDVLFALNTLGFDNYVKPLRLYLTKYREIVM 142
+ E V+ AL +LGF +Y+ ++ L + + + +
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVAL 99
>AK223442-1|BAD97162.1| 176|Homo sapiens down-regulator of
transcription 1 variant protein.
Length = 176
Score = 71.7 bits (168), Expect = 2e-12
Identities = 34/93 (36%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 50 EQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTI 109
+ D +P A I K++K +P N ++A DARE V C +EFI ++SEA++ C ++KTI
Sbjct: 8 DDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 110 NGEDVLFALNTLGFDNYVKPLRLYLTKYREIVM 142
+ E V+ AL +LGF +Y+ ++ L + + + +
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVAL 99
>DQ072116-1|AAY57326.1| 147|Homo sapiens polymerase (DNA directed),
epsilon 3 (p17 subunit) protein.
Length = 147
Score = 68.9 bits (161), Expect = 1e-11
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 49 REQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKT 108
R +D LP A I +I+K A+P+ I+K+AR + S F+ + TS A++ KRKT
Sbjct: 4 RPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKT 63
Query: 109 INGEDVLFALNTLGFDNYVKPLRLYLTKYR 138
+N DVL A+ + F +V PL+ L YR
Sbjct: 64 LNASDVLSAMEEMEFQRFVTPLKEALEAYR 93
>BC004170-1|AAH04170.1| 147|Homo sapiens polymerase (DNA directed),
epsilon 3 (p17 subunit) protein.
Length = 147
Score = 68.9 bits (161), Expect = 1e-11
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 49 REQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKT 108
R +D LP A I +I+K A+P+ I+K+AR + S F+ + TS A++ KRKT
Sbjct: 4 RPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKT 63
Query: 109 INGEDVLFALNTLGFDNYVKPLRLYLTKYR 138
+N DVL A+ + F +V PL+ L YR
Sbjct: 64 LNASDVLSAMEEMEFQRFVTPLKEALEAYR 93
>BC003166-1|AAH03166.1| 147|Homo sapiens polymerase (DNA directed),
epsilon 3 (p17 subunit) protein.
Length = 147
Score = 68.9 bits (161), Expect = 1e-11
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 49 REQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKT 108
R +D LP A I +I+K A+P+ I+K+AR + S F+ + TS A++ KRKT
Sbjct: 4 RPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKT 63
Query: 109 INGEDVLFALNTLGFDNYVKPLRLYLTKYR 138
+N DVL A+ + F +V PL+ L YR
Sbjct: 64 LNASDVLSAMEEMEFQRFVTPLKEALEAYR 93
>AL137066-5|CAH70100.1| 147|Homo sapiens polymerase (DNA directed),
epsilon 3 (p17 subunit) protein.
Length = 147
Score = 68.9 bits (161), Expect = 1e-11
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 49 REQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKT 108
R +D LP A I +I+K A+P+ I+K+AR + S F+ + TS A++ KRKT
Sbjct: 4 RPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKT 63
Query: 109 INGEDVLFALNTLGFDNYVKPLRLYLTKYR 138
+N DVL A+ + F +V PL+ L YR
Sbjct: 64 LNASDVLSAMEEMEFQRFVTPLKEALEAYR 93
>AK074629-1|BAC11099.1| 147|Homo sapiens protein ( Homo sapiens
cDNA FLJ90148 fis, clone HEMBB1001959, weakly similar to
CCAAT-BINDING TRANSCRIPTION FACTOR SUBUNIT A. ).
Length = 147
Score = 68.9 bits (161), Expect = 1e-11
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 49 REQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKT 108
R +D LP A I +I+K A+P+ I+K+AR + S F+ + TS A++ KRKT
Sbjct: 4 RPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKT 63
Query: 109 INGEDVLFALNTLGFDNYVKPLRLYLTKYR 138
+N DVL A+ + F +V PL+ L YR
Sbjct: 64 LNASDVLSAMEEMEFQRFVTPLKEALEAYR 93
>AF261689-1|AAF90133.1| 147|Homo sapiens DNA polymerase epsilon p17
subunit protein.
Length = 147
Score = 68.9 bits (161), Expect = 1e-11
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 49 REQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKT 108
R +D LP A I +I+K A+P+ I+K+AR + S F+ + TS A++ KRKT
Sbjct: 4 RPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKT 63
Query: 109 INGEDVLFALNTLGFDNYVKPLRLYLTKYR 138
+N DVL A+ + F +V PL+ L YR
Sbjct: 64 LNASDVLSAMEEMEFQRFVTPLKEALEAYR 93
>AF226077-1|AAF72417.1| 147|Homo sapiens CHRAC17 protein.
Length = 147
Score = 68.9 bits (161), Expect = 1e-11
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 49 REQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKT 108
R +D LP A I +I+K A+P+ I+K+AR + S F+ + TS A++ KRKT
Sbjct: 4 RPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKT 63
Query: 109 INGEDVLFALNTLGFDNYVKPLRLYLTKYR 138
+N DVL A+ + F +V PL+ L YR
Sbjct: 64 LNASDVLSAMEEMEFQRFVTPLKEALEAYR 93
>AY720898-1|AAU15052.1| 147|Homo sapiens arsenic transactivated
protein protein.
Length = 147
Score = 68.5 bits (160), Expect = 1e-11
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 49 REQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKT 108
R +D LP A I +I+K A+P+ I+K+AR + S F+ + TS A++ KRKT
Sbjct: 4 RPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMNGKRKT 63
Query: 109 INGEDVLFALNTLGFDNYVKPLRLYLTKYR 138
+N DVL A+ + F +V PL+ L YR
Sbjct: 64 LNASDVLSAMEEMEFQRFVTPLKEALEAYR 93
>AK074782-1|BAC11206.1| 147|Homo sapiens protein ( Homo sapiens
cDNA FLJ90301 fis, clone NT2RP2000610, weakly similar to
CCAAT-BINDING TRANSCRIPTION FACTOR SUBUNIT A. ).
Length = 147
Score = 68.5 bits (160), Expect = 1e-11
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 49 REQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKT 108
R +D LP A I +I+K A+P+ I+K+AR + S F+ + TS A++ KRKT
Sbjct: 4 RPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMNGKRKT 63
Query: 109 INGEDVLFALNTLGFDNYVKPLRLYLTKYR 138
+N DVL A+ + F +V PL+ L YR
Sbjct: 64 LNASDVLSAMEEMEFQRFVTPLKEALEAYR 93
>AK074762-1|BAC11190.1| 147|Homo sapiens protein ( Homo sapiens
cDNA FLJ90281 fis, clone NT2RP1000468, weakly similar to
CCAAT-BINDING TRANSCRIPTION FACTOR SUBUNIT A . ).
Length = 147
Score = 68.1 bits (159), Expect = 2e-11
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 49 REQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKT 108
R +D LP A I +I+K A+P+ I+K+AR + S F+ + TS A++ KRKT
Sbjct: 4 RPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKT 63
Query: 109 INGEDVLFALNTLGFDNYVKPLRLYLTKYR 138
+N DVL A+ + F +V PL+ L YR
Sbjct: 64 LNASDVLSAMEEMEFQRFVIPLKEALEAYR 93
>Z22969-1|CAA80542.1| 1151|Homo sapiens M130 antigen cytoplasmic
variant 1 protein.
Length = 1151
Score = 30.3 bits (65), Expect = 4.6
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 15 NGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQDRFLPIANIAK--IMKRAIPENG 72
N L ADD ++NS EN+ +S S A L +FLPI+ + K I+ ENG
Sbjct: 1095 NSCLNADDLDLMNSS-----ENSHESADFSAAELISVSKFLPISGMEKEAILSHTEKENG 1149
Query: 73 KI 74
+
Sbjct: 1150 NL 1151
>BC051281-1|AAH51281.1| 1156|Homo sapiens CD163 molecule protein.
Length = 1156
Score = 30.3 bits (65), Expect = 4.6
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 15 NGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQDRFLPIANIAK--IMKRAIPENG 72
N L ADD ++NS EN+ +S S A L +FLPI+ + K I+ ENG
Sbjct: 1100 NSCLNADDLDLMNSS-----ENSHESADFSAAELISVSKFLPISGMEKEAILSHTEKENG 1154
Query: 73 KI 74
+
Sbjct: 1155 NL 1156
>AF005043-1|AAB61614.1| 976|Homo sapiens poly(ADP-ribose)
glycohydrolase protein.
Length = 976
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 18 LVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKD 77
LV + N D +++++SD+ S+ N R+ +FL +A + E+ + AK
Sbjct: 177 LVPEQFSNANIDRSPQNDDHSDTDSEEN---RDNQQFLTTVKLANAKQTTEDEHAREAKS 233
Query: 78 ARECVQEC 85
++C + C
Sbjct: 234 HQKCSKSC 241
>DQ867088-1|ABH85399.1| 976|Homo sapiens poly (ADP-ribose)
glycohydrolase protein.
Length = 976
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 18 LVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKD 77
LV + N D +++++SD+ S+ N R+ +FL +A + E + AK
Sbjct: 177 LVPEQFSNANIDRSPQNDDHSDTDSEEN---RDNQQFLTTVKLANAKQTTEDEQAREAKS 233
Query: 78 ARECVQEC 85
++C + C
Sbjct: 234 HQKCSKSC 241
>BC052966-1|AAH52966.1| 976|Homo sapiens PARG protein protein.
Length = 976
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 18 LVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKD 77
LV + N D +++++SD+ S+ N R+ +FL +A + E + AK
Sbjct: 177 LVPEQFSNANIDRSPQNDDHSDTDSEEN---RDNQQFLTTVKLANAKQTTEDEQAREAKS 233
Query: 78 ARECVQEC 85
++C + C
Sbjct: 234 HQKCSKSC 241
>BC050560-1|AAH50560.1| 976|Homo sapiens poly (ADP-ribose)
glycohydrolase protein.
Length = 976
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 18 LVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKD 77
LV + N D +++++SD+ S+ N R+ +FL +A + E + AK
Sbjct: 177 LVPEQFSNANIDRSPQNDDHSDTDSEEN---RDNQQFLTTVKLANAKQTTEDEQAREAKS 233
Query: 78 ARECVQEC 85
++C + C
Sbjct: 234 HQKCSKSC 241
>AY575849-1|AAT66422.1| 868|Homo sapiens poly (ADP-ribose)
glycohydrolase protein.
Length = 868
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 18 LVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKD 77
LV + N D +++++SD+ S+ N R+ +FL +A + E + AK
Sbjct: 69 LVPEQFSNANIDRSPQNDDHSDTDSEEN---RDNQQFLTTVKLANAKQTTEDEQAREAKS 125
Query: 78 ARECVQEC 85
++C + C
Sbjct: 126 HQKCSKSC 133
>AY575848-1|AAT66421.1| 894|Homo sapiens poly (ADP-ribose)
glycohydrolase protein.
Length = 894
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 18 LVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKD 77
LV + N D +++++SD+ S+ N R+ +FL +A + E + AK
Sbjct: 95 LVPEQFSNANIDRSPQNDDHSDTDSEEN---RDNQQFLTTVKLANAKQTTEDEQAREAKS 151
Query: 78 ARECVQEC 85
++C + C
Sbjct: 152 HQKCSKSC 159
>AY258587-1|AAP83314.1| 976|Homo sapiens poly(ADP-ribose)
glycohydrolase protein.
Length = 976
Score = 29.9 bits (64), Expect = 6.0
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 18 LVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKD 77
LV + N D +++++SD+ S+ N R+ +FL +A + E + AK
Sbjct: 177 LVPEQFSNANIDRSPQNDDHSDTDSEEN---RDNQQFLTTVKLANAKQTTEDEQAREAKS 233
Query: 78 ARECVQEC 85
++C + C
Sbjct: 234 HQKCSKSC 241
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.315 0.133 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,193,250
Number of Sequences: 224733
Number of extensions: 1051012
Number of successful extensions: 1840
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1818
Number of HSP's gapped (non-prelim): 31
length of query: 196
length of database: 73,234,838
effective HSP length: 86
effective length of query: 110
effective length of database: 53,907,800
effective search space: 5929858000
effective search space used: 5929858000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 63 (29.5 bits)
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