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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000219-TA|BGIBMGA000219-PA|IPR003957|Histone-like
transcription factor/archaeal histone/DNA topoisomerase,
IPR003958|Transcription factor CBF/NF-Y/archaeal histone,
IPR009072|Histone-fold
         (196 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025470-4|AAB71054.1|  403|Caenorhabditis elegans Hypothetical ...   123   1e-28
Z81546-4|CAB04453.1|  184|Caenorhabditis elegans Hypothetical pr...    49   3e-06
U00043-7|AAC77511.1|  137|Caenorhabditis elegans Hypothetical pr...    38   0.005
AL132949-3|CAB61070.1|  179|Caenorhabditis elegans Hypothetical ...    32   0.31 
U29244-15|AAC71096.2|  471|Caenorhabditis elegans Hypothetical p...    31   0.41 
Z35639-1|CAA84693.1| 1792|Caenorhabditis elegans Hypothetical pr...    31   0.54 
AC024859-9|ABQ13045.1|  296|Caenorhabditis elegans Hypothetical ...    30   0.95 
AC024859-8|ABQ13046.1|  337|Caenorhabditis elegans Hypothetical ...    30   0.95 
Z93388-11|CAB07657.1|  103|Caenorhabditis elegans Hypothetical p...    28   3.8  
Z83245-8|CAB05839.1|  103|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z83245-4|CAB05837.1|  103|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z83245-1|CAB05835.4|  103|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z82271-2|CAB05210.1|  103|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z81128-5|CAB03396.1|  103|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z73102-10|CAA97407.1|  103|Caenorhabditis elegans Hypothetical p...    28   3.8  
Z70750-7|CAA94742.1|  103|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z68336-1|CAA92734.1|  103|Caenorhabditis elegans Hypothetical pr...    28   3.8  
X15634-1|CAA33643.1|  103|Caenorhabditis elegans Histone protein...    28   3.8  
U64845-10|AAC48026.1|  103|Caenorhabditis elegans Histone protei...    28   3.8  
U64843-10|AAF98220.1|  103|Caenorhabditis elegans Histone protei...    28   3.8  
U64843-3|AAF98223.1|  103|Caenorhabditis elegans Histone protein...    28   3.8  
U58750-9|AAB00649.2|  103|Caenorhabditis elegans Histone protein...    28   3.8  
U41625-5|AAA83329.1|  103|Caenorhabditis elegans Histone protein...    28   3.8  
AF047656-2|AAC05101.1|  103|Caenorhabditis elegans Histone prote...    28   3.8  
AC024696-3|AAK84518.1|  103|Caenorhabditis elegans Histone prote...    28   3.8  
Z36753-13|CAA85331.1|  598|Caenorhabditis elegans Hypothetical p...    28   5.1  
AF003141-7|AAK21481.1|  411|Caenorhabditis elegans Hypothetical ...    28   5.1  
U88174-4|AAB42275.1|  280|Caenorhabditis elegans Hypothetical pr...    27   6.7  
U70855-5|AAB09160.2|  886|Caenorhabditis elegans Hypothetical pr...    27   6.7  
U55857-10|AAA98035.2|  895|Caenorhabditis elegans Hypothetical p...    27   6.7  
Z78415-8|CAB01675.2|  765|Caenorhabditis elegans Hypothetical pr...    27   8.8  
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu...    27   8.8  
AC006617-10|AAF39773.1|  195|Caenorhabditis elegans Hypothetical...    27   8.8  

>AF025470-4|AAB71054.1|  403|Caenorhabditis elegans Hypothetical
           protein W10D9.4 protein.
          Length = 403

 Score =  123 bits (296), Expect = 1e-28
 Identities = 51/92 (55%), Positives = 71/92 (77%)

Query: 48  LREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRK 107
           L +Q+RFLPIAN+ +IMK  +    K+AKDA+EC QEC+SEFISF+ SEA++ C + KRK
Sbjct: 59  LLDQERFLPIANVVRIMKTQMDPQAKLAKDAKECAQECVSEFISFIASEAAEICNITKRK 118

Query: 108 TINGEDVLFALNTLGFDNYVKPLRLYLTKYRE 139
           TI  +D+L A+   GFDNY +P+R++L KYR+
Sbjct: 119 TITADDLLTAMEATGFDNYAEPMRIFLQKYRQ 150


>Z81546-4|CAB04453.1|  184|Caenorhabditis elegans Hypothetical
           protein F53A2.5 protein.
          Length = 184

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 55  LPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTINGEDV 114
           LP   I +I+K  +PE  +IA ++R+ +  C  EF+  +  EA      ++RKTI  E V
Sbjct: 22  LPQKGINQIIKEVVPEM-RIANESRDMINACCVEFVKHIAREAQRIASQDQRKTIYHEHV 80

Query: 115 LFALNTLGF 123
             AL  LGF
Sbjct: 81  QKALQNLGF 89


>U00043-7|AAC77511.1|  137|Caenorhabditis elegans Hypothetical
           protein T26A5.8 protein.
          Length = 137

 Score = 37.9 bits (84), Expect = 0.005
 Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 3/67 (4%)

Query: 55  LPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTINGEDV 114
           +P A + ++MK    +N   +KDAR+ +    + F+  ++  ++   + +K KTI+G+DV
Sbjct: 18  MPAAIVTRLMKE---DNISASKDARDVIARAAAVFLINLSDVSAQSARDQKHKTISGDDV 74

Query: 115 LFALNTL 121
           +  L  L
Sbjct: 75  VKGLREL 81


>AL132949-3|CAB61070.1|  179|Caenorhabditis elegans Hypothetical
           protein Y53F4B.3 protein.
          Length = 179

 Score = 31.9 bits (69), Expect = 0.31
 Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 55  LPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTINGEDV 114
           LP+  + K++ R  P+   +  +A + + +    FI  +++ A+    +EKRKT+  +D+
Sbjct: 36  LPLGRVKKVV-RMNPDVEMLNNEALQLMAKAAELFIKELSNAANQNAALEKRKTVQTKDI 94


>U29244-15|AAC71096.2|  471|Caenorhabditis elegans Hypothetical
           protein ZK1248.15 protein.
          Length = 471

 Score = 31.5 bits (68), Expect = 0.41
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 10/87 (11%)

Query: 74  IAKDARECVQECISEFISFVTSEASDRCKVEKRKTINGEDVLFALNTLGFDNYVKPLRLY 133
           +A  A   +++ + E   ++  E S     E++  ING    F+ NT   D+ +  LR  
Sbjct: 206 VANCANNSIKDLLEEKNQYLHVETS----TEQQIQING----FSANTTVVDDLI--LRTA 255

Query: 134 LTKYREIVMSPVTINKLNKTIVLYSED 160
           L   REI+  P T+N  ++ I+L +ED
Sbjct: 256 LRIKREIMSIPSTMNLNDRAIILVTED 282


>Z35639-1|CAA84693.1| 1792|Caenorhabditis elegans Hypothetical
           protein D2045.2 protein.
          Length = 1792

 Score = 31.1 bits (67), Expect = 0.54
 Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 6/129 (4%)

Query: 60  IAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASD-RCKVEKRKTINGEDVLFAL 118
           +A+I K+  P     + D  E +  C    + F      D +  VEK  T +    L AL
Sbjct: 138 LARIEKKHWPTIEMSSVDV-EIIARCFQAILVFSARSIEDIKVLVEKLPTASSAPELPAL 196

Query: 119 NTLGF---DNYVKPLRLYLTKYREIVMSPVTINKLNKTIVLYSEDGTACVSNENEIDTQT 175
           +   F      V PL L LT+ + +++  +    L   I  +     A  S  NE+D   
Sbjct: 197 SINEFVQIGRKVFPLGLNLTETKVMILKVLGKELLTDDIA-FPLMVVASASKLNEVDDLA 255

Query: 176 ESTILYVPT 184
           ES I  +PT
Sbjct: 256 ESLIKKIPT 264


>AC024859-9|ABQ13045.1|  296|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.14a protein.
          Length = 296

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 13  LDNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQDRFLPI 57
           L  GF VAD+ FV+N+ D +E ++ S    K+     +   FL +
Sbjct: 132 LSVGFAVADERFVINALDFMEKKDPSTHAKKATVLFGDTLEFLEL 176


>AC024859-8|ABQ13046.1|  337|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.14b protein.
          Length = 337

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 13  LDNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQDRFLPI 57
           L  GF VAD+ FV+N+ D +E ++ S    K+     +   FL +
Sbjct: 173 LSVGFAVADERFVINALDFMEKKDPSTHAKKATVLFGDTLEFLEL 217


>Z93388-11|CAB07657.1|  103|Caenorhabditis elegans Hypothetical
           protein T10C6.14 protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 89  FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122
           F+  V  +A   C+  KRKT+   DV++AL   G
Sbjct: 62  FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95


>Z83245-8|CAB05839.1|  103|Caenorhabditis elegans Hypothetical
           protein ZK131.8 protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 89  FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122
           F+  V  +A   C+  KRKT+   DV++AL   G
Sbjct: 62  FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95


>Z83245-4|CAB05837.1|  103|Caenorhabditis elegans Hypothetical
           protein ZK131.4 protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 89  FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122
           F+  V  +A   C+  KRKT+   DV++AL   G
Sbjct: 62  FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95


>Z83245-1|CAB05835.4|  103|Caenorhabditis elegans Hypothetical
           protein ZK131.1 protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 89  FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122
           F+  V  +A   C+  KRKT+   DV++AL   G
Sbjct: 62  FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95


>Z82271-2|CAB05210.1|  103|Caenorhabditis elegans Hypothetical
           protein F54E12.3 protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 89  FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122
           F+  V  +A   C+  KRKT+   DV++AL   G
Sbjct: 62  FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95


>Z81128-5|CAB03396.1|  103|Caenorhabditis elegans Hypothetical
           protein T23D8.5 protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 89  FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122
           F+  V  +A   C+  KRKT+   DV++AL   G
Sbjct: 62  FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95


>Z73102-10|CAA97407.1|  103|Caenorhabditis elegans Hypothetical
           protein B0035.9 protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 89  FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122
           F+  V  +A   C+  KRKT+   DV++AL   G
Sbjct: 62  FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95


>Z70750-7|CAA94742.1|  103|Caenorhabditis elegans Hypothetical
           protein C50F4.7 protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 89  FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122
           F+  V  +A   C+  KRKT+   DV++AL   G
Sbjct: 62  FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95


>Z68336-1|CAA92734.1|  103|Caenorhabditis elegans Hypothetical
           protein F22B3.1 protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 89  FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122
           F+  V  +A   C+  KRKT+   DV++AL   G
Sbjct: 62  FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95


>X15634-1|CAA33643.1|  103|Caenorhabditis elegans Histone protein
           protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 89  FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122
           F+  V  +A   C+  KRKT+   DV++AL   G
Sbjct: 62  FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95


>U64845-10|AAC48026.1|  103|Caenorhabditis elegans Histone protein 5
           protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 89  FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122
           F+  V  +A   C+  KRKT+   DV++AL   G
Sbjct: 62  FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95


>U64843-10|AAF98220.1|  103|Caenorhabditis elegans Histone protein
           18 protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 89  FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122
           F+  V  +A   C+  KRKT+   DV++AL   G
Sbjct: 62  FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95


>U64843-3|AAF98223.1|  103|Caenorhabditis elegans Histone protein 28
           protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 89  FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122
           F+  V  +A   C+  KRKT+   DV++AL   G
Sbjct: 62  FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95


>U58750-9|AAB00649.2|  103|Caenorhabditis elegans Histone protein 60
           protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 89  FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122
           F+  V  +A   C+  KRKT+   DV++AL   G
Sbjct: 62  FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95


>U41625-5|AAA83329.1|  103|Caenorhabditis elegans Histone protein 38
           protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 89  FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122
           F+  V  +A   C+  KRKT+   DV++AL   G
Sbjct: 62  FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95


>AF047656-2|AAC05101.1|  103|Caenorhabditis elegans Histone protein
           31 protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 89  FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122
           F+  V  +A   C+  KRKT+   DV++AL   G
Sbjct: 62  FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95


>AC024696-3|AAK84518.1|  103|Caenorhabditis elegans Histone protein
           50 protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 89  FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122
           F+  V  +A   C+  KRKT+   DV++AL   G
Sbjct: 62  FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95


>Z36753-13|CAA85331.1|  598|Caenorhabditis elegans Hypothetical
           protein T09A5.2a protein.
          Length = 598

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 48  LREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASD--RCKVEK 105
           +RE+  +  +   A+ +K    E  ++A D ++    C++E    +TS+ +D  R  +E+
Sbjct: 165 MREEGHWKKLQRCAEELKTEKDELKRLALDTKDAFNVCMAEMRMMLTSKTTDFFRVLIER 224

Query: 106 RK 107
            K
Sbjct: 225 YK 226


>AF003141-7|AAK21481.1|  411|Caenorhabditis elegans Hypothetical
           protein W02D3.2 protein.
          Length = 411

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)

Query: 15  NGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLRE 50
           +G +V++ T  +   D L  EN +++G  S AP+RE
Sbjct: 290 DGIIVSNTT--IARPDYLRSENKTETGGLSGAPVRE 323


>U88174-4|AAB42275.1|  280|Caenorhabditis elegans Hypothetical
           protein M01A10.3 protein.
          Length = 280

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 6/45 (13%)

Query: 89  FISFVTSEASDRCKVEKRKTI------NGEDVLFALNTLGFDNYV 127
           ++SF  ++ SD  KV+  +        NGEDV+  +N     NYV
Sbjct: 64  YVSFTVAKKSDNAKVKPHQVFLRFVAQNGEDVVVVVNPDANGNYV 108


>U70855-5|AAB09160.2|  886|Caenorhabditis elegans Hypothetical
           protein K08F11.2 protein.
          Length = 886

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 14/51 (27%), Positives = 24/51 (47%)

Query: 1   MDSDELGNDLVRLDNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQ 51
           +D + L N L+  D+ F V  D F +   +++     S   +  N  LR+Q
Sbjct: 193 IDEETLLNRLMERDDEFAVFSDEFFMQRKEIISIRKTSKRKTNENLILRKQ 243


>U55857-10|AAA98035.2|  895|Caenorhabditis elegans Hypothetical
           protein K08D10.1 protein.
          Length = 895

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 14/51 (27%), Positives = 24/51 (47%)

Query: 1   MDSDELGNDLVRLDNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQ 51
           +D + L N L+  D+ F V  D F +   +++     S   +  N  LR+Q
Sbjct: 193 IDEETLLNRLMERDDEFAVFSDEFFMQRKEIISIRKTSKRKTNENLILRKQ 243


>Z78415-8|CAB01675.2|  765|Caenorhabditis elegans Hypothetical
           protein C17G1.6a protein.
          Length = 765

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 156 LYSEDGTACVSNENEIDTQTESTILYVPTTY 186
           LY  DG    S+E   +T+  S  LY P+T+
Sbjct: 495 LYKPDGQIYTSDEQSAETKYSSEELYDPSTF 525


>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
           (myotubularin) family protein 5 protein.
          Length = 1744

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 109 INGEDVLFALNTLGFDNYVKPLRLYLTKYREIVMSPVTINKLNK 152
           + G+DV      LGF N +K +   L+  R IV++  ++ +L++
Sbjct: 176 VTGKDVAMLFKMLGFQNVIKIIHALLSDCR-IVLASSSLMRLSR 218


>AC006617-10|AAF39773.1|  195|Caenorhabditis elegans Hypothetical
           protein C39B5.10 protein.
          Length = 195

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)

Query: 81  CVQECISEFISFVTSEASDRCKVEK--RKTINGEDVLFALNTLGFDNYVKPLRLYLTKY- 137
           C Q+   + +SF  +  +D  K+     ++   E + + + T   +NY  P++LY   Y 
Sbjct: 6   CTQQIYCKLVSFHVANVNDNYKLHVFCYESRFFETLTYTVRTFYNENYTLPVKLYRVCYL 65

Query: 138 REI 140
           RE+
Sbjct: 66  REV 68


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.315    0.133    0.368 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,097,717
Number of Sequences: 27539
Number of extensions: 218901
Number of successful extensions: 535
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 508
Number of HSP's gapped (non-prelim): 33
length of query: 196
length of database: 12,573,161
effective HSP length: 78
effective length of query: 118
effective length of database: 10,425,119
effective search space: 1230164042
effective search space used: 1230164042
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 57 (27.1 bits)

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