BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000219-TA|BGIBMGA000219-PA|IPR003957|Histone-like transcription factor/archaeal histone/DNA topoisomerase, IPR003958|Transcription factor CBF/NF-Y/archaeal histone, IPR009072|Histone-fold (196 letters) Database: celegans 27,539 sequences; 12,573,161 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF025470-4|AAB71054.1| 403|Caenorhabditis elegans Hypothetical ... 123 1e-28 Z81546-4|CAB04453.1| 184|Caenorhabditis elegans Hypothetical pr... 49 3e-06 U00043-7|AAC77511.1| 137|Caenorhabditis elegans Hypothetical pr... 38 0.005 AL132949-3|CAB61070.1| 179|Caenorhabditis elegans Hypothetical ... 32 0.31 U29244-15|AAC71096.2| 471|Caenorhabditis elegans Hypothetical p... 31 0.41 Z35639-1|CAA84693.1| 1792|Caenorhabditis elegans Hypothetical pr... 31 0.54 AC024859-9|ABQ13045.1| 296|Caenorhabditis elegans Hypothetical ... 30 0.95 AC024859-8|ABQ13046.1| 337|Caenorhabditis elegans Hypothetical ... 30 0.95 Z93388-11|CAB07657.1| 103|Caenorhabditis elegans Hypothetical p... 28 3.8 Z83245-8|CAB05839.1| 103|Caenorhabditis elegans Hypothetical pr... 28 3.8 Z83245-4|CAB05837.1| 103|Caenorhabditis elegans Hypothetical pr... 28 3.8 Z83245-1|CAB05835.4| 103|Caenorhabditis elegans Hypothetical pr... 28 3.8 Z82271-2|CAB05210.1| 103|Caenorhabditis elegans Hypothetical pr... 28 3.8 Z81128-5|CAB03396.1| 103|Caenorhabditis elegans Hypothetical pr... 28 3.8 Z73102-10|CAA97407.1| 103|Caenorhabditis elegans Hypothetical p... 28 3.8 Z70750-7|CAA94742.1| 103|Caenorhabditis elegans Hypothetical pr... 28 3.8 Z68336-1|CAA92734.1| 103|Caenorhabditis elegans Hypothetical pr... 28 3.8 X15634-1|CAA33643.1| 103|Caenorhabditis elegans Histone protein... 28 3.8 U64845-10|AAC48026.1| 103|Caenorhabditis elegans Histone protei... 28 3.8 U64843-10|AAF98220.1| 103|Caenorhabditis elegans Histone protei... 28 3.8 U64843-3|AAF98223.1| 103|Caenorhabditis elegans Histone protein... 28 3.8 U58750-9|AAB00649.2| 103|Caenorhabditis elegans Histone protein... 28 3.8 U41625-5|AAA83329.1| 103|Caenorhabditis elegans Histone protein... 28 3.8 AF047656-2|AAC05101.1| 103|Caenorhabditis elegans Histone prote... 28 3.8 AC024696-3|AAK84518.1| 103|Caenorhabditis elegans Histone prote... 28 3.8 Z36753-13|CAA85331.1| 598|Caenorhabditis elegans Hypothetical p... 28 5.1 AF003141-7|AAK21481.1| 411|Caenorhabditis elegans Hypothetical ... 28 5.1 U88174-4|AAB42275.1| 280|Caenorhabditis elegans Hypothetical pr... 27 6.7 U70855-5|AAB09160.2| 886|Caenorhabditis elegans Hypothetical pr... 27 6.7 U55857-10|AAA98035.2| 895|Caenorhabditis elegans Hypothetical p... 27 6.7 Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical pr... 27 8.8 AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 27 8.8 AC006617-10|AAF39773.1| 195|Caenorhabditis elegans Hypothetical... 27 8.8 >AF025470-4|AAB71054.1| 403|Caenorhabditis elegans Hypothetical protein W10D9.4 protein. Length = 403 Score = 123 bits (296), Expect = 1e-28 Identities = 51/92 (55%), Positives = 71/92 (77%) Query: 48 LREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRK 107 L +Q+RFLPIAN+ +IMK + K+AKDA+EC QEC+SEFISF+ SEA++ C + KRK Sbjct: 59 LLDQERFLPIANVVRIMKTQMDPQAKLAKDAKECAQECVSEFISFIASEAAEICNITKRK 118 Query: 108 TINGEDVLFALNTLGFDNYVKPLRLYLTKYRE 139 TI +D+L A+ GFDNY +P+R++L KYR+ Sbjct: 119 TITADDLLTAMEATGFDNYAEPMRIFLQKYRQ 150 >Z81546-4|CAB04453.1| 184|Caenorhabditis elegans Hypothetical protein F53A2.5 protein. Length = 184 Score = 48.8 bits (111), Expect = 3e-06 Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 55 LPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTINGEDV 114 LP I +I+K +PE +IA ++R+ + C EF+ + EA ++RKTI E V Sbjct: 22 LPQKGINQIIKEVVPEM-RIANESRDMINACCVEFVKHIAREAQRIASQDQRKTIYHEHV 80 Query: 115 LFALNTLGF 123 AL LGF Sbjct: 81 QKALQNLGF 89 >U00043-7|AAC77511.1| 137|Caenorhabditis elegans Hypothetical protein T26A5.8 protein. Length = 137 Score = 37.9 bits (84), Expect = 0.005 Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 3/67 (4%) Query: 55 LPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTINGEDV 114 +P A + ++MK +N +KDAR+ + + F+ ++ ++ + +K KTI+G+DV Sbjct: 18 MPAAIVTRLMKE---DNISASKDARDVIARAAAVFLINLSDVSAQSARDQKHKTISGDDV 74 Query: 115 LFALNTL 121 + L L Sbjct: 75 VKGLREL 81 >AL132949-3|CAB61070.1| 179|Caenorhabditis elegans Hypothetical protein Y53F4B.3 protein. Length = 179 Score = 31.9 bits (69), Expect = 0.31 Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Query: 55 LPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTINGEDV 114 LP+ + K++ R P+ + +A + + + FI +++ A+ +EKRKT+ +D+ Sbjct: 36 LPLGRVKKVV-RMNPDVEMLNNEALQLMAKAAELFIKELSNAANQNAALEKRKTVQTKDI 94 >U29244-15|AAC71096.2| 471|Caenorhabditis elegans Hypothetical protein ZK1248.15 protein. Length = 471 Score = 31.5 bits (68), Expect = 0.41 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 10/87 (11%) Query: 74 IAKDARECVQECISEFISFVTSEASDRCKVEKRKTINGEDVLFALNTLGFDNYVKPLRLY 133 +A A +++ + E ++ E S E++ ING F+ NT D+ + LR Sbjct: 206 VANCANNSIKDLLEEKNQYLHVETS----TEQQIQING----FSANTTVVDDLI--LRTA 255 Query: 134 LTKYREIVMSPVTINKLNKTIVLYSED 160 L REI+ P T+N ++ I+L +ED Sbjct: 256 LRIKREIMSIPSTMNLNDRAIILVTED 282 >Z35639-1|CAA84693.1| 1792|Caenorhabditis elegans Hypothetical protein D2045.2 protein. Length = 1792 Score = 31.1 bits (67), Expect = 0.54 Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 6/129 (4%) Query: 60 IAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASD-RCKVEKRKTINGEDVLFAL 118 +A+I K+ P + D E + C + F D + VEK T + L AL Sbjct: 138 LARIEKKHWPTIEMSSVDV-EIIARCFQAILVFSARSIEDIKVLVEKLPTASSAPELPAL 196 Query: 119 NTLGF---DNYVKPLRLYLTKYREIVMSPVTINKLNKTIVLYSEDGTACVSNENEIDTQT 175 + F V PL L LT+ + +++ + L I + A S NE+D Sbjct: 197 SINEFVQIGRKVFPLGLNLTETKVMILKVLGKELLTDDIA-FPLMVVASASKLNEVDDLA 255 Query: 176 ESTILYVPT 184 ES I +PT Sbjct: 256 ESLIKKIPT 264 >AC024859-9|ABQ13045.1| 296|Caenorhabditis elegans Hypothetical protein Y71H2AM.14a protein. Length = 296 Score = 30.3 bits (65), Expect = 0.95 Identities = 15/45 (33%), Positives = 24/45 (53%) Query: 13 LDNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQDRFLPI 57 L GF VAD+ FV+N+ D +E ++ S K+ + FL + Sbjct: 132 LSVGFAVADERFVINALDFMEKKDPSTHAKKATVLFGDTLEFLEL 176 >AC024859-8|ABQ13046.1| 337|Caenorhabditis elegans Hypothetical protein Y71H2AM.14b protein. Length = 337 Score = 30.3 bits (65), Expect = 0.95 Identities = 15/45 (33%), Positives = 24/45 (53%) Query: 13 LDNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQDRFLPI 57 L GF VAD+ FV+N+ D +E ++ S K+ + FL + Sbjct: 173 LSVGFAVADERFVINALDFMEKKDPSTHAKKATVLFGDTLEFLEL 217 >Z93388-11|CAB07657.1| 103|Caenorhabditis elegans Hypothetical protein T10C6.14 protein. Length = 103 Score = 28.3 bits (60), Expect = 3.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Query: 89 FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122 F+ V +A C+ KRKT+ DV++AL G Sbjct: 62 FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95 >Z83245-8|CAB05839.1| 103|Caenorhabditis elegans Hypothetical protein ZK131.8 protein. Length = 103 Score = 28.3 bits (60), Expect = 3.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Query: 89 FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122 F+ V +A C+ KRKT+ DV++AL G Sbjct: 62 FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95 >Z83245-4|CAB05837.1| 103|Caenorhabditis elegans Hypothetical protein ZK131.4 protein. Length = 103 Score = 28.3 bits (60), Expect = 3.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Query: 89 FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122 F+ V +A C+ KRKT+ DV++AL G Sbjct: 62 FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95 >Z83245-1|CAB05835.4| 103|Caenorhabditis elegans Hypothetical protein ZK131.1 protein. Length = 103 Score = 28.3 bits (60), Expect = 3.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Query: 89 FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122 F+ V +A C+ KRKT+ DV++AL G Sbjct: 62 FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95 >Z82271-2|CAB05210.1| 103|Caenorhabditis elegans Hypothetical protein F54E12.3 protein. Length = 103 Score = 28.3 bits (60), Expect = 3.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Query: 89 FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122 F+ V +A C+ KRKT+ DV++AL G Sbjct: 62 FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95 >Z81128-5|CAB03396.1| 103|Caenorhabditis elegans Hypothetical protein T23D8.5 protein. Length = 103 Score = 28.3 bits (60), Expect = 3.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Query: 89 FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122 F+ V +A C+ KRKT+ DV++AL G Sbjct: 62 FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95 >Z73102-10|CAA97407.1| 103|Caenorhabditis elegans Hypothetical protein B0035.9 protein. Length = 103 Score = 28.3 bits (60), Expect = 3.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Query: 89 FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122 F+ V +A C+ KRKT+ DV++AL G Sbjct: 62 FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95 >Z70750-7|CAA94742.1| 103|Caenorhabditis elegans Hypothetical protein C50F4.7 protein. Length = 103 Score = 28.3 bits (60), Expect = 3.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Query: 89 FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122 F+ V +A C+ KRKT+ DV++AL G Sbjct: 62 FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95 >Z68336-1|CAA92734.1| 103|Caenorhabditis elegans Hypothetical protein F22B3.1 protein. Length = 103 Score = 28.3 bits (60), Expect = 3.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Query: 89 FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122 F+ V +A C+ KRKT+ DV++AL G Sbjct: 62 FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95 >X15634-1|CAA33643.1| 103|Caenorhabditis elegans Histone protein protein. Length = 103 Score = 28.3 bits (60), Expect = 3.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Query: 89 FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122 F+ V +A C+ KRKT+ DV++AL G Sbjct: 62 FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95 >U64845-10|AAC48026.1| 103|Caenorhabditis elegans Histone protein 5 protein. Length = 103 Score = 28.3 bits (60), Expect = 3.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Query: 89 FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122 F+ V +A C+ KRKT+ DV++AL G Sbjct: 62 FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95 >U64843-10|AAF98220.1| 103|Caenorhabditis elegans Histone protein 18 protein. Length = 103 Score = 28.3 bits (60), Expect = 3.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Query: 89 FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122 F+ V +A C+ KRKT+ DV++AL G Sbjct: 62 FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95 >U64843-3|AAF98223.1| 103|Caenorhabditis elegans Histone protein 28 protein. Length = 103 Score = 28.3 bits (60), Expect = 3.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Query: 89 FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122 F+ V +A C+ KRKT+ DV++AL G Sbjct: 62 FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95 >U58750-9|AAB00649.2| 103|Caenorhabditis elegans Histone protein 60 protein. Length = 103 Score = 28.3 bits (60), Expect = 3.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Query: 89 FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122 F+ V +A C+ KRKT+ DV++AL G Sbjct: 62 FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95 >U41625-5|AAA83329.1| 103|Caenorhabditis elegans Histone protein 38 protein. Length = 103 Score = 28.3 bits (60), Expect = 3.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Query: 89 FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122 F+ V +A C+ KRKT+ DV++AL G Sbjct: 62 FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95 >AF047656-2|AAC05101.1| 103|Caenorhabditis elegans Histone protein 31 protein. Length = 103 Score = 28.3 bits (60), Expect = 3.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Query: 89 FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122 F+ V +A C+ KRKT+ DV++AL G Sbjct: 62 FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95 >AC024696-3|AAK84518.1| 103|Caenorhabditis elegans Histone protein 50 protein. Length = 103 Score = 28.3 bits (60), Expect = 3.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Query: 89 FISFVTSEASDRCKVEKRKTINGEDVLFALNTLG 122 F+ V +A C+ KRKT+ DV++AL G Sbjct: 62 FLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQG 95 >Z36753-13|CAA85331.1| 598|Caenorhabditis elegans Hypothetical protein T09A5.2a protein. Length = 598 Score = 27.9 bits (59), Expect = 5.1 Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 2/62 (3%) Query: 48 LREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASD--RCKVEK 105 +RE+ + + A+ +K E ++A D ++ C++E +TS+ +D R +E+ Sbjct: 165 MREEGHWKKLQRCAEELKTEKDELKRLALDTKDAFNVCMAEMRMMLTSKTTDFFRVLIER 224 Query: 106 RK 107 K Sbjct: 225 YK 226 >AF003141-7|AAK21481.1| 411|Caenorhabditis elegans Hypothetical protein W02D3.2 protein. Length = 411 Score = 27.9 bits (59), Expect = 5.1 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%) Query: 15 NGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLRE 50 +G +V++ T + D L EN +++G S AP+RE Sbjct: 290 DGIIVSNTT--IARPDYLRSENKTETGGLSGAPVRE 323 >U88174-4|AAB42275.1| 280|Caenorhabditis elegans Hypothetical protein M01A10.3 protein. Length = 280 Score = 27.5 bits (58), Expect = 6.7 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 6/45 (13%) Query: 89 FISFVTSEASDRCKVEKRKTI------NGEDVLFALNTLGFDNYV 127 ++SF ++ SD KV+ + NGEDV+ +N NYV Sbjct: 64 YVSFTVAKKSDNAKVKPHQVFLRFVAQNGEDVVVVVNPDANGNYV 108 >U70855-5|AAB09160.2| 886|Caenorhabditis elegans Hypothetical protein K08F11.2 protein. Length = 886 Score = 27.5 bits (58), Expect = 6.7 Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 1 MDSDELGNDLVRLDNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQ 51 +D + L N L+ D+ F V D F + +++ S + N LR+Q Sbjct: 193 IDEETLLNRLMERDDEFAVFSDEFFMQRKEIISIRKTSKRKTNENLILRKQ 243 >U55857-10|AAA98035.2| 895|Caenorhabditis elegans Hypothetical protein K08D10.1 protein. Length = 895 Score = 27.5 bits (58), Expect = 6.7 Identities = 14/51 (27%), Positives = 24/51 (47%) Query: 1 MDSDELGNDLVRLDNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQ 51 +D + L N L+ D+ F V D F + +++ S + N LR+Q Sbjct: 193 IDEETLLNRLMERDDEFAVFSDEFFMQRKEIISIRKTSKRKTNENLILRKQ 243 >Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical protein C17G1.6a protein. Length = 765 Score = 27.1 bits (57), Expect = 8.8 Identities = 12/31 (38%), Positives = 17/31 (54%) Query: 156 LYSEDGTACVSNENEIDTQTESTILYVPTTY 186 LY DG S+E +T+ S LY P+T+ Sbjct: 495 LYKPDGQIYTSDEQSAETKYSSEELYDPSTF 525 >AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubularin) family protein 5 protein. Length = 1744 Score = 27.1 bits (57), Expect = 8.8 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 109 INGEDVLFALNTLGFDNYVKPLRLYLTKYREIVMSPVTINKLNK 152 + G+DV LGF N +K + L+ R IV++ ++ +L++ Sbjct: 176 VTGKDVAMLFKMLGFQNVIKIIHALLSDCR-IVLASSSLMRLSR 218 >AC006617-10|AAF39773.1| 195|Caenorhabditis elegans Hypothetical protein C39B5.10 protein. Length = 195 Score = 27.1 bits (57), Expect = 8.8 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Query: 81 CVQECISEFISFVTSEASDRCKVEK--RKTINGEDVLFALNTLGFDNYVKPLRLYLTKY- 137 C Q+ + +SF + +D K+ ++ E + + + T +NY P++LY Y Sbjct: 6 CTQQIYCKLVSFHVANVNDNYKLHVFCYESRFFETLTYTVRTFYNENYTLPVKLYRVCYL 65 Query: 138 REI 140 RE+ Sbjct: 66 REV 68 Database: celegans Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 12,573,161 Number of sequences in database: 27,539 Lambda K H 0.315 0.133 0.368 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 5,097,717 Number of Sequences: 27539 Number of extensions: 218901 Number of successful extensions: 535 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 508 Number of HSP's gapped (non-prelim): 33 length of query: 196 length of database: 12,573,161 effective HSP length: 78 effective length of query: 118 effective length of database: 10,425,119 effective search space: 1230164042 effective search space used: 1230164042 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (22.0 bits) S2: 57 (27.1 bits)
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