Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000217-TA|BGIBMGA000217-PA|IPR013753|Ras
(275 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g44690.1 68415.m05562 Rac-like GTP-binding protein (ARAC9) id... 52 6e-07
At4g35950.1 68417.m05115 Rac-like GTP-binding protein (ARAC6) id... 50 2e-06
At4g35020.1 68417.m04967 Rac-like GTP-binding protein (ARAC3) / ... 50 2e-06
At3g51300.1 68416.m05615 Rac-like GTP-binding protein (ARAC11) /... 50 2e-06
At2g17800.1 68415.m02063 Rac-like GTP-binding protein (ARAC1) (A... 50 2e-06
At5g45970.1 68418.m05652 Rac-like GTP-binding protein (ARAC2) id... 49 4e-06
At1g75840.1 68414.m08809 Rac-like GTP-binding protein (ARAC5) / ... 49 4e-06
At1g20090.1 68414.m02514 Rac-like GTP-binding protein (ARAC4) / ... 49 4e-06
At5g62880.1 68418.m07890 Rac-like GTP-binding protein (ARAC10) i... 46 4e-05
At4g28950.1 68417.m04136 Rac-like GTP-binding protein (ARAC7) id... 46 4e-05
At3g48040.1 68416.m05237 Rac-like GTP-binding protein (ARAC8) id... 44 8e-05
At1g73640.1 68414.m08525 Ras-related GTP-binding family protein ... 38 0.007
At1g18200.1 68414.m02264 Ras-related GTP-binding family protein ... 38 0.007
At5g47520.1 68418.m05867 Ras-related GTP-binding protein, putati... 36 0.039
At5g65270.1 68418.m08210 Ras-related GTP-binding family protein ... 35 0.052
At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small GTP... 35 0.052
At4g39990.1 68417.m05663 Ras-related GTP-binding protein, putati... 35 0.068
At4g39890.1 68417.m05651 Ras-related GTP-binding family protein ... 33 0.16
At2g31680.1 68415.m03867 Ras-related GTP-binding protein, putati... 33 0.28
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 32 0.36
At5g47960.1 68418.m05925 Ras-related GTP-binding family protein ... 32 0.36
At5g55190.1 68418.m06880 Ras-related GTP-binding protein (RAN3) ... 32 0.48
At5g20020.1 68418.m02382 Ras-related GTP-binding nuclear protein... 32 0.48
At5g20010.1 68418.m02381 Ras-related GTP-binding nuclear protein... 32 0.48
At3g12160.1 68416.m01516 Ras-related GTP-binding family protein ... 32 0.48
At3g07410.1 68416.m00883 Ras-related GTP-binding family protein ... 32 0.48
At1g05810.1 68414.m00608 Ras-related protein (ARA-1) (ARA) / sma... 32 0.48
At5g27540.1 68418.m03297 GTP-binding protein-related low similar... 31 0.64
At1g43890.1 68414.m05059 Ras-related GTP-binding protein, putati... 31 0.64
At1g22740.1 68414.m02841 Ras-related protein (RAB7) / AtRab75 / ... 31 0.64
At5g47200.1 68418.m05820 Ras-related GTP-binding protein, putati... 31 0.84
At4g20160.1 68417.m02949 expressed protein ; expression supporte... 31 0.84
At4g17530.1 68417.m02622 Ras-related GTP-binding protein, putati... 31 0.84
At5g39620.1 68418.m04798 Ras-related GTP-binding protein, putati... 31 1.1
At3g11730.1 68416.m01439 Ras-related GTP-binding protein, putati... 31 1.1
At2g44610.1 68415.m05553 Ras-related GTP-binding protein, putati... 31 1.1
At1g06400.1 68414.m00677 Ras-related GTP-binding protein (ARA-2)... 31 1.1
At1g02130.1 68414.m00139 Ras-related protein (ARA-5) / small GTP... 31 1.1
At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putati... 30 1.5
At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putati... 30 1.5
At2g22290.1 68415.m02645 Ras-related GTP-binding protein, putati... 30 1.5
At3g18820.1 68416.m02390 Ras-related GTP-binding protein, putati... 30 1.9
At3g04960.1 68416.m00538 expressed protein low similarity to SP|... 30 1.9
At2g21880.1 68415.m02600 Ras-related GTP-binding protein, putati... 30 1.9
At1g49300.1 68414.m05526 Ras-related GTP-binding protein, putati... 30 1.9
At1g16920.1 68414.m02051 Ras-related GTP-binding protein, putati... 30 1.9
At5g60860.1 68418.m07634 Ras-related GTP-binding protein, putati... 29 2.6
At5g45750.1 68418.m05624 Ras-related GTP-binding protein, putati... 29 2.6
At4g18800.1 68417.m02776 Ras-related GTP-binding family protein ... 29 2.6
At4g18430.1 68417.m02735 Ras-related GTP-binding protein, putati... 29 2.6
At3g15060.1 68416.m01905 Ras-related GTP-binding family protein ... 29 2.6
At4g25070.1 68417.m03596 expressed protein ; expression supporte... 29 3.4
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 29 3.4
At3g18550.1 68416.m02359 TCP family transcription factor, putati... 29 3.4
At5g45130.1 68418.m05540 Ras-related protein (RHA1) / small GTP-... 29 4.5
At4g19640.1 68417.m02884 Ras-related GTP-binding protein, putati... 29 4.5
At4g09720.1 68417.m01596 Ras-related GTP-binding protein, putati... 29 4.5
At2g27470.1 68415.m03320 CCAAT-box binding transcription factor ... 29 4.5
At2g17440.1 68415.m02012 leucine-rich repeat family protein cont... 29 4.5
At1g79320.1 68414.m09244 latex abundant protein, putative (AMC5)... 29 4.5
At1g09630.1 68414.m01080 Ras-related GTP-binding protein, putati... 29 4.5
At5g40300.1 68418.m04888 integral membrane protein, putative MtN... 28 5.9
At2g33870.1 68415.m04158 Ras-related GTP-binding protein, putati... 28 5.9
At1g28550.1 68414.m03513 Ras-related GTP-binding protein, putati... 28 5.9
At5g64990.1 68418.m08174 Ras-related GTP-binding protein, putati... 28 7.8
At5g13590.1 68418.m01572 expressed protein 28 7.8
At3g63150.1 68416.m07092 GTP-binding protein-related low similar... 28 7.8
At3g46830.1 68416.m05083 Ras-related protein (RAB11A) / small GT... 28 7.8
At3g16100.1 68416.m02034 Ras-related GTP-binding family protein ... 28 7.8
At1g52280.1 68414.m05899 Ras-related GTP-binding protein, putati... 28 7.8
At1g07410.1 68414.m00790 Ras-related GTP-binding protein, putati... 28 7.8
>At2g44690.1 68415.m05562 Rac-like GTP-binding protein (ARAC9)
identical to rac-like protein ARAC9 GI:5381419 from
[Arabidopsis thaliana]
Length = 209
Score = 51.6 bits (118), Expect = 6e-07
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV VGDGAVGK+ L+ +Y +TF +Y PT +D FN +
Sbjct: 21 CVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFNANV 59
>At4g35950.1 68417.m05115 Rac-like GTP-binding protein (ARAC6)
identical to rac-like GTP binding protein Arac6
GI:3406757 from [Arabidopsis thaliana]
Length = 197
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV VGDGAVGK+ L+ +Y +TF +Y PT +D F+ +
Sbjct: 9 CVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV 47
>At4g35020.1 68417.m04967 Rac-like GTP-binding protein (ARAC3) /
Rho-like GTP-binding protein (ROP6) identical to
SP|Q38912 RAC-like GTP binding protein ARAC3
(GTP-binding protein ROP6) {Arabidopsis thaliana};
identical to cDNA Rho-like GTP binding protein (Rop6)
GI:2645642
Length = 198
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV VGDGAVGK+ L+ +Y +TF +Y PT +D F+ +
Sbjct: 9 CVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV 47
>At3g51300.1 68416.m05615 Rac-like GTP-binding protein (ARAC11) /
Rho-like GTP-binding protein (ROP1) identical to GTP
binding protein Rop1At [Arabidopsis thaliana]
GI:2558666, rac-like GTP binding protein Arac11
[Arabidopsis thaliana] GI:3603426
Length = 197
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV VGDGAVGK+ L+ +Y +TF +Y PT +D F+ +
Sbjct: 9 CVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV 47
>At2g17800.1 68415.m02063 Rac-like GTP-binding protein (ARAC1)
(ATGP2) identical to Rac-like GTP-binding protein
(ARAC1) SP:Q38902 from [Arabidopsis thaliana]
Length = 197
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV VGDGAVGK+ L+ +Y +TF +Y PT +D F+ +
Sbjct: 9 CVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV 47
>At5g45970.1 68418.m05652 Rac-like GTP-binding protein (ARAC2)
identical to RAC-like GTP binding protein ARAC2
SP:Q38903
Length = 201
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV VGDGAVGK+ ++ +Y +TF +Y PT +D F+ +
Sbjct: 9 CVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANV 47
>At1g75840.1 68414.m08809 Rac-like GTP-binding protein (ARAC5) /
Rho-like GTP-binding protein (ROP4) identical to
RAC-like GTP-binding protein (ARAC5) SP:Q38937
[Arabidopsis thaliana], Rho-like GTP binding protein
[Arabidopsis thaliana] GI:2654009; identical to cDNA
Rho-like GTP binding protein (Rop4) GI:2654008
Length = 196
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV VGDGAVGK+ ++ +Y +TF +Y PT +D F+ +
Sbjct: 9 CVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANV 47
>At1g20090.1 68414.m02514 Rac-like GTP-binding protein (ARAC4) /
Rho-like GTP-binding protein (ROP2) identical to
SP:Q38919 RAC-like GTP binding protein ARAC4 (GTP
binding protein ROP2) [Arabidopsis thaliana], Rho-like
GTP binding protein [Arabidopsis thaliana] GI:2654009
Length = 195
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV VGDGAVGK+ ++ +Y +TF +Y PT +D F+ +
Sbjct: 8 CVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANV 46
>At5g62880.1 68418.m07890 Rac-like GTP-binding protein (ARAC10)
identical to rac GTP binding protein Arac10 [Arabidopsis
thaliana] GI:3702964, rac-like GTP binding protein
Arac10 [Arabidopsis thaliana] GI:7211193; contains Pfam
profile: PF00071 Ras family
Length = 215
Score = 45.6 bits (103), Expect = 4e-05
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV VGDGAVGK+ ++ Y + F +Y PT +D F+ +
Sbjct: 11 CVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANV 49
>At4g28950.1 68417.m04136 Rac-like GTP-binding protein (ARAC7)
identical to rac GTP binding protein Arac7 GI:3702962
from [Arabidopsis thaliana]
Length = 209
Score = 45.6 bits (103), Expect = 4e-05
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV VGDGAVGK+ ++ Y + F +Y PT +D F+ +
Sbjct: 9 CVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANV 47
>At3g48040.1 68416.m05237 Rac-like GTP-binding protein (ARAC8)
identical to rac GTP binding protein Arac8 GI:3702966
from [Arabidopsis thaliana]
Length = 208
Score = 44.4 bits (100), Expect = 8e-05
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFN 266
CV VGDGAVGK+ ++ Y + F +Y PT +D F+
Sbjct: 11 CVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS 46
>At1g73640.1 68414.m08525 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 ras family Pfam profile:
PF00071 Ras family
Length = 233
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/29 (51%), Positives = 24/29 (82%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD AVGKS+L++ +++D FR + +PT
Sbjct: 17 VLIGDSAVGKSNLLSRFSKDEFRFDSKPT 45
>At1g18200.1 68414.m02264 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 354
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/29 (51%), Positives = 24/29 (82%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD AVGKS+L++ +++D FR + +PT
Sbjct: 17 VLIGDSAVGKSNLLSRFSRDEFRLDSKPT 45
>At5g47520.1 68418.m05867 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB11J GI:1370160 from
[Lotus japonicus]
Length = 221
Score = 35.5 bits (78), Expect = 0.039
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKIQKQ 272
VL+GD AVGKS+L+A +A R+E+ P + T + Q Q
Sbjct: 18 VLIGDSAVGKSNLLARFA----RDEFYPNSKSTIGVEFQTQ 54
>At5g65270.1 68418.m08210 Ras-related GTP-binding family protein
similar to GTP-binding protein RAB11A GI:1370142 from
[Lotus japonicus]; contains Pfam profile: PF00071 Ras
family
Length = 226
Score = 35.1 bits (77), Expect = 0.052
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD AVGKS ++A YA+D F + + T
Sbjct: 21 VLIGDSAVGKSQILARYARDEFSLDSKAT 49
>At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small
GTP-binding protein, putative identical to SP:P28187
Ras-related protein ARA-4 {Arabidopsis thaliana}
Length = 214
Score = 35.1 bits (77), Expect = 0.052
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKIQKQPIL 275
V++GD AVGKS+L+ YA R E+ P + T + Q Q +L
Sbjct: 16 VIIGDSAVGKSNLLTRYA----RNEFNPNSKATIGVEFQTQSML 55
>At4g39990.1 68417.m05663 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303738 from [Pisum
sativum]
Length = 224
Score = 34.7 bits (76), Expect = 0.068
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD AVGKS L+A +A+D F + + T
Sbjct: 21 VLIGDSAVGKSQLLARFARDEFSMDSKAT 49
>At4g39890.1 68417.m05651 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 214
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
V +GD +VGK+S+I + D F YQPT
Sbjct: 13 VFLGDQSVGKTSIITRFMYDKFDTTYQPT 41
>At2g31680.1 68415.m03867 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:289370 from [Brassica
napus]
Length = 219
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
V++GD AVGKS+L++ YA++ F + T
Sbjct: 16 VIIGDSAVGKSNLLSRYARNEFNAHSKAT 44
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 32.3 bits (70), Expect = 0.36
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 163 DDDDYDYSEVTEENGRTVIRDDDSEDLNCCDKVNDWAVRDKKNRR 207
DDDD+D + +++ + + D + E N + + W+ + K+ RR
Sbjct: 192 DDDDFDDDDDDDDDENSELWDSNLELENVVESIKGWSTKGKRGRR 236
>At5g47960.1 68418.m05925 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 223
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD AVGKS L+A ++++ F E + T
Sbjct: 19 VLIGDSAVGKSQLLARFSRNEFSIESKAT 47
>At5g55190.1 68418.m06880 Ras-related GTP-binding protein (RAN3)
identical to atran3 [Arabidopsis thaliana] GI:2058280
Length = 221
Score = 31.9 bits (69), Expect = 0.48
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
V+VGDG GK++ + + F ++Y+PT
Sbjct: 17 VIVGDGGTGKTTFVKRHLTGEFEKKYEPT 45
>At5g20020.1 68418.m02382 Ras-related GTP-binding nuclear protein
(RAN-2) identical to GTP-binding nuclear protein RAN-2
SP:P41917 from [Arabidopsis thaliana]
Length = 221
Score = 31.9 bits (69), Expect = 0.48
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
V+VGDG GK++ + + F ++Y+PT
Sbjct: 17 VIVGDGGTGKTTFVKRHLTGEFEKKYEPT 45
>At5g20010.1 68418.m02381 Ras-related GTP-binding nuclear protein
(RAN-1) identical to GTP-binding nuclear protein RAN-1
SP:P41916 from [Arabidopsis thaliana]
Length = 221
Score = 31.9 bits (69), Expect = 0.48
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
V+VGDG GK++ + + F ++Y+PT
Sbjct: 17 VIVGDGGTGKTTFVKRHLTGEFEKKYEPT 45
>At3g12160.1 68416.m01516 Ras-related GTP-binding family protein
similar to ras-related GTP-binding protein RGP1
SP:P25766 from [Oryza sativa];contains Pfam profile:
PF00071 Ras family
Length = 222
Score = 31.9 bits (69), Expect = 0.48
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGK 268
VL+GD AVGK+ L+A +A++ F + + T F K
Sbjct: 19 VLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTK 55
>At3g07410.1 68416.m00883 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 217
Score = 31.9 bits (69), Expect = 0.48
Identities = 12/22 (54%), Positives = 19/22 (86%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTF 253
VL+GD AVGKS+L++ +++D F
Sbjct: 16 VLIGDSAVGKSNLLSRFSRDEF 37
>At1g05810.1 68414.m00608 Ras-related protein (ARA-1) (ARA) / small
GTP-binding protein, putative nearly identical to
SP:P19892 Ras-related protein ARA-1 [Arabidopsis
thaliana] (Gene 76:313-319(1989))
Length = 261
Score = 31.9 bits (69), Expect = 0.48
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
V++GD AVGKS+L++ YA++ F + T
Sbjct: 59 VVIGDSAVGKSNLLSRYARNEFSANSKAT 87
>At5g27540.1 68418.m03297 GTP-binding protein-related low similarity
to Mig-2-like GTPase Mtl [Drosophila melanogaster]
GI:7271872; contains Pfam profile PF00036: EF hand
Length = 648
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/32 (50%), Positives = 18/32 (56%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYD 263
V+VGD GKSSLI A A D+F P D
Sbjct: 21 VVVGDKGTGKSSLIVAAATDSFPPNVPPVLPD 52
>At1g43890.1 68414.m05059 Ras-related GTP-binding protein, putative
similar to GTP-binding protein(RAB1Y) GI:1370173 from
(Lotus japonicus)
Length = 212
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+L+GD VGKSSL+ ++ +TF ++ PT
Sbjct: 17 LLIGDSGVGKSSLLLSFTSNTF-DDLSPT 44
>At1g22740.1 68414.m02841 Ras-related protein (RAB7) / AtRab75 /
small GTP-binding protein, putative identical to
SP:O04157 Ras-related protein Rab7 (AtRab75)
[Arabidopsis thaliana]
Length = 203
Score = 31.5 bits (68), Expect = 0.64
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+++GD VGK+SL+ Y + F ++Y+ T
Sbjct: 12 IILGDSGVGKTSLMNQYVNNKFSQQYKAT 40
>At5g47200.1 68418.m05820 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303750 from [Pisum
sativum]
Length = 202
Score = 31.1 bits (67), Expect = 0.84
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+L+GD VGKS L+ +A D++ + Y T
Sbjct: 12 LLIGDSGVGKSCLLLRFADDSYLDSYIST 40
>At4g20160.1 68417.m02949 expressed protein ; expression supported
by MPSS
Length = 1188
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 170 SEVTEENGRTVIRDDDSEDLNCCDKVNDWAVRDKKNRR 207
+E R I +++S + +KVN W ++KKNRR
Sbjct: 618 TEKESREERREIEEEESTSMGIAEKVNLWNSKEKKNRR 655
>At4g17530.1 68417.m02622 Ras-related GTP-binding protein, putative
very strong similarity to RAB1C [Lotus corniculatus var.
japonicus] GI:1370166; contains Pfam profile PF00071:
Ras family
Length = 202
Score = 31.1 bits (67), Expect = 0.84
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+L+GD VGKS L+ +A D++ + Y T
Sbjct: 12 LLIGDSGVGKSCLLLRFADDSYLDSYIST 40
>At5g39620.1 68418.m04798 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB7A GI:1370182 from
[Lotus japonicus]
Length = 204
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAY 262
+L+GD VGK+SL+ Y F++ + T Y
Sbjct: 9 ILLGDSGVGKTSLLKRYNDKDFKQLHNSTIY 39
>At3g11730.1 68416.m01439 Ras-related GTP-binding protein, putative
similar to Rab1-like small GTP-binding protein
GI:4096662 from [Petunia x hybrida]
Length = 205
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+L+GD +VGKS L+ +A D + + Y T
Sbjct: 12 LLIGDSSVGKSCLLLRFADDAYIDSYIST 40
>At2g44610.1 68415.m05553 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:623586 from [Nicotiana
tabacum] ; contains an ADP-ribosylation factors family
signature for proteins involved in protein trafficking
Length = 208
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
V +GD +VGK+S+I + D F YQ T
Sbjct: 13 VFLGDQSVGKTSIITRFMYDKFDNTYQAT 41
>At1g06400.1 68414.m00677 Ras-related GTP-binding protein (ARA-2)
identical to Ras-related protein ARA-2 SP:P28185 from
[Arabidopsis thaliana]
Length = 216
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKIQK 271
VL+GD VGKS+L++ + ++ F E + T F K K
Sbjct: 17 VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTK 56
>At1g02130.1 68414.m00139 Ras-related protein (ARA-5) / small
GTP-binding protein, putative identical to Ras-related
protein ARA-5 SP:P28188 from [Arabidopsis thaliana]
Length = 203
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+L+GD VGKS L+ ++ D++ E Y T
Sbjct: 12 LLIGDSGVGKSCLLLRFSDDSYVESYIST 40
>At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871508 from [Pisum
sativum]
Length = 216
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+L+GD VGKS L+ ++ DTF + T
Sbjct: 19 LLIGDSGVGKSCLLLRFSDDTFTTSFITT 47
>At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871510 from [Pisum
sativum]; contains Pfam profile: PF00071 Ras family
Length = 218
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+L+GD VGKS L+ ++ DTF + T
Sbjct: 19 LLIGDSGVGKSCLLLRFSDDTFTTSFITT 47
>At2g22290.1 68415.m02645 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:550072 from [Homo
sapiens]
Length = 207
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
V +GD +VGK+S+I + D F YQ T
Sbjct: 13 VFLGDQSVGKTSIITRFMYDKFDTTYQAT 41
>At3g18820.1 68416.m02390 Ras-related GTP-binding protein, putative
similar to Ras-related protein RAB7 GI:1370186 from
[Pisum sativum], Plant Mol. Biol. 21 (6), 1195-1199
(1993); contains Pfam profile: PF00071 Ras family
Length = 206
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+++GD VGK+SL+ Y F +Y+ T
Sbjct: 12 IILGDSGVGKTSLMNQYVNKKFSNQYKAT 40
>At3g04960.1 68416.m00538 expressed protein low similarity to
SP|P32380 NUF1 protein (Spindle poly body spacer protein
SPC110) {Saccharomyces cerevisiae}
Length = 556
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 54 PDYRTDYRKPSNVELEKRLQESRAREKISYFQDKVTPPELNLDRREAELVFRFDNHEP 111
P R + RK S +E E L + R Y + + P + + +REA + D EP
Sbjct: 272 PAIRAETRKRSRLEYESPLSAEKGR----YAETLIRPGKKQVQKREAHEIIYIDEDEP 325
>At2g21880.1 68415.m02600 Ras-related GTP-binding protein, putative
similar to Ras family GTP-binding protein SP:Q43463 from
[Glycine max]
Length = 212
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+++GD VGK+SL+ Y F ++Y+ T
Sbjct: 13 IVLGDSGVGKTSLMNQYVYKKFNKQYKAT 41
>At1g49300.1 68414.m05526 Ras-related GTP-binding protein, putative
contains Pfam profile: PF00071 Ras family
Length = 206
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+++GD VGK+SL+ Y F +Y+ T
Sbjct: 12 IILGDSGVGKTSLMNQYVNKKFSNQYKAT 40
>At1g16920.1 68414.m02051 Ras-related GTP-binding protein, putative
similar to GTP binding protein GI:218228 from [Vicia
faba]; identical to cDNA small GTP-binding protein
(Rab11) GI:451859
Length = 216
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD VGKS+L++ + ++ F E + T
Sbjct: 17 VLIGDSGVGKSNLLSRFTKNEFNLESKST 45
>At5g60860.1 68418.m07634 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 217
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD VGKS+L++ + ++ F E + T
Sbjct: 17 VLIGDSGVGKSNLLSRFTRNEFSLESKST 45
>At5g45750.1 68418.m05624 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303744 from [Pisum
sativum]
Length = 216
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD VGKS+L++ + ++ F E + T
Sbjct: 17 VLIGDSGVGKSNLLSRFTKNEFSLESKST 45
>At4g18800.1 68417.m02776 Ras-related GTP-binding family protein
similar to ras-related GTP binding protein RIC2
SP:P40393 from [Oryza sativa]; contains Pfam profile:
PF00071 Ras family
Length = 214
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD VGKS+L++ + ++ F E + T
Sbjct: 17 VLIGDSGVGKSNLLSRFTRNEFSLESKST 45
>At4g18430.1 68417.m02735 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 217
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD VGKS+L++ + ++ F E + T
Sbjct: 17 VLIGDSGVGKSNLLSRFTRNEFSIESKST 45
>At3g15060.1 68416.m01905 Ras-related GTP-binding family protein
similar to GTP-binding protein GI:303742 from [Pisum
sativum]; contains Pfam profile: PF00071 ras family
Length = 217
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD VGKS+L++ + ++ F E + T
Sbjct: 17 VLIGDSGVGKSNLLSRFTRNEFSLESKST 45
>At4g25070.1 68417.m03596 expressed protein ; expression supported
by MPSS
Length = 765
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 136 IATRPPERDGPFVFGIHSPSQFPI---PRKDDDDYDYSEVTEENGRTVI 181
+ P E GP V G +P+ P+ P K DD+YD E+TE+ R +
Sbjct: 197 VPRNPVEIRGP-VRGKVAPAVKPVVVLPTKFDDEYDSDEITEDVPRNPV 244
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 111 PTEYSTAQYRAPTVHYAKPPIPANGIATRPPERDGPFV 148
P YS PT HY PP P I + PP+ P +
Sbjct: 718 PPHYSLPP-PTPTYHYISPPPPPTPIHSPPPQSHPPCI 754
Score = 27.9 bits (59), Expect = 7.8
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Query: 108 NHEPT-EYSTAQYRAPTVHYAKPPIPANGIATRPPERDGPFVFGIHSPSQFP 158
+H P EYS PTVHY PP P+ + PP P V+ +SP P
Sbjct: 749 SHPPCIEYSPPP--PPTVHYNPPPPPSPAHYSPPP---SPPVYYYNSPPPPP 795
>At3g18550.1 68416.m02359 TCP family transcription factor, putative
similar to teosinte branched1 protein GI:13649866
[Danthoniopsis dinteri]
Length = 434
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 163 DDDDYDYSEVTEENGRTVIRDDDSEDLNCCDKVNDWAVRDK 203
++D +D+ E+ + N R+ + E +C DK+ + D+
Sbjct: 320 EEDAHDHGEIIKNNNRSQVNRSSFEMTHCEDKIEELCKNDR 360
>At5g45130.1 68418.m05540 Ras-related protein (RHA1) / small
GTP-binding protein identical to Ras-related protein
RHA1 SP:P31582 from [Arabidopsis thaliana]
Length = 200
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD GKSSL+ + +D F E + T
Sbjct: 14 VLLGDVGAGKSSLVLRFVKDQFVEFQEST 42
>At4g19640.1 68417.m02884 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB5A GI:1370178 from
[Lotus japonicus]
Length = 200
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD GKSSL+ + +D F E + T
Sbjct: 14 VLLGDVGAGKSSLVLRFVKDQFVEFQEST 42
>At4g09720.1 68417.m01596 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB7A from [Lotus
japonicus]
Length = 206
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+++GD VGK+SL+ Y F +Y+ T
Sbjct: 12 IVLGDSGVGKTSLMNQYVHKKFSMQYKAT 40
>At2g27470.1 68415.m03320 CCAAT-box binding transcription factor
subunit HAP3-related contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to polymerase epsilon p17
subunit (DNA polymerase epsilon subunit 3) (YB-like
protein 1) (YBL1) (NF-YB-like protein) (SP:Q9JKP7) [Mus
musculus];
Length = 275
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 163 DDDDYDYSEVTEENGRTVIRDDDSEDLNCCDKVND 197
D++D + E TEENG DD++ + N D+ N+
Sbjct: 184 DEEDENDDENTEENGNDEENDDENTEENGNDEENE 218
>At2g17440.1 68415.m02012 leucine-rich repeat family protein
contains Pfam PF00560: Leucine Rich Repeats
Length = 526
Score = 28.7 bits (61), Expect = 4.5
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Query: 44 HRPLPAPRNLPDYRTDYRKPSNVELEKRLQESRAREKISYFQDKVTPPEL-NLDRREAEL 102
HR LP + D T NVE E R A +K+ P EL N+ + +
Sbjct: 15 HRSLPLRPEIDDVETATSLIQNVEKEDR-NRLEAIDKLVKTSSSEVPLELFNVFKEMKKS 73
Query: 103 VFRFDNHEPTEYSTAQYRAPTVH 125
+ RF + E T +T +VH
Sbjct: 74 LVRFQSTEQTREATKILDLESVH 96
>At1g79320.1 68414.m09244 latex abundant protein, putative (AMC5) /
caspase family protein similar to latex-abundant protein
[Hevea brasiliensis] gb:AAD13216; contains Pfam domain,
PF00656: ICE-like protease (caspase) p20 domain
Length = 368
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 141 PERDGPFVFGIHSP--SQFPIPRKDDDDYDYSEVTEENGRTVIRDDDSEDL 189
P + G +F +S ++ P +DDD Y E + +I DDD DL
Sbjct: 72 PAKSGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFRDL 122
>At1g09630.1 68414.m01080 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:1370146 from [Lotus
japonicus]
Length = 217
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD VGKS+L++ + ++ F E + T
Sbjct: 16 VLIGDSGVGKSNLLSRFTRNEFCLESKST 44
>At5g40300.1 68418.m04888 integral membrane protein, putative MtN24
gene, Medicago truncatula, EMBL:MTY15290; contains Pfam
PF04535 : Domain of unknown function (DUF588); contains
4 transmembrane domains; similar to putative ethylene
responsive element binding protein (GI:22135858)
[Arabidopsis thaliana]
Length = 270
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 43 PHRPLPAPRNLPDYRTDYRKPSNVELEKRLQESRAREKISYFQDKVTPPE 92
PH +P P ++ T +R +N E EK++ ESR + + S+ TP E
Sbjct: 65 PHTIIPTP-SVAKTETPFRV-TNGEEEKKVSESRRQLRPSFSSSSSTPRE 112
>At2g33870.1 68415.m04158 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 219
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL GD VGKS+L++ + ++ F + + T
Sbjct: 17 VLTGDSGVGKSNLLSRFTRNDFSHDSRST 45
>At1g28550.1 68414.m03513 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from (Pisum
sativum)
Length = 218
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL GD VGKS+L++ + ++ F + + T
Sbjct: 17 VLTGDSGVGKSNLLSRFTRNDFSHDSRAT 45
>At5g64990.1 68418.m08174 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:550072 from [Homo
sapiens]
Length = 206
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
V +GD VGK+S+I + F YQ T
Sbjct: 11 VFLGDQGVGKTSIITCFMYGKFDTSYQAT 39
>At5g13590.1 68418.m01572 expressed protein
Length = 1190
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 53 LPDYRTDYRKPSNVELEKRLQESRAR--EKISYFQDKVTPPELNLDRREAELVFRFDNHE 110
+PD R R P N E Q+++++ K Y + K+ ++ D F FDNH
Sbjct: 786 IPDRR---RLPDNTESNLHDQDTKSKVLSKFFYGKTKLIVSKIQYDSHLVNAEFEFDNHG 842
Query: 111 PT 112
T
Sbjct: 843 NT 844
>At3g63150.1 68416.m07092 GTP-binding protein-related low similarity
to SP|Q38912 RAC-like GTP binding protein ARAC3
(GTP-binding protein ROP6) {Arabidopsis thaliana};
contains Pfam profile PF00036: EF hand (domain)
Length = 643
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 233 LVGDGAVGKSSLIAAYAQDTF 253
+ GD GKSSLI+A A +TF
Sbjct: 19 VAGDKGTGKSSLISAVASETF 39
>At3g46830.1 68416.m05083 Ras-related protein (RAB11A) / small
GTP-binding protein, putative identical to SP|Q96283
Ras-related protein Rab11A {Arabidopsis thaliana};
identical to cDNA Rab11 protein GI:2598228
Length = 217
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD VGKS++++ + ++ F E + T
Sbjct: 16 VLIGDSGVGKSNILSRFTRNEFCLESKST 44
>At3g16100.1 68416.m02034 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 206
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+++GD VGK+SL+ + F +Y+ T
Sbjct: 12 IILGDSGVGKTSLMNQFVNRKFSNQYKAT 40
>At1g52280.1 68414.m05899 Ras-related GTP-binding protein, putative
similar to RAB7D GI:1370187 from [Lotus japonicus]
(Plant J. 11 (2), 237-250 (1997)); contains Pfam
PF00071: Ras family
Length = 206
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+++GD VGK+SL+ + F +Y+ T
Sbjct: 12 IILGDSGVGKTSLMNQFVNRKFSNQYKAT 40
>At1g07410.1 68414.m00790 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB11C GI:1370146 from
[Lotus japonicus]
Length = 214
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD VGKS++++ + ++ F E + T
Sbjct: 16 VLIGDSGVGKSNILSRFTRNEFCLESKST 44
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.135 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,873,973
Number of Sequences: 28952
Number of extensions: 311661
Number of successful extensions: 1064
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 990
Number of HSP's gapped (non-prelim): 80
length of query: 275
length of database: 12,070,560
effective HSP length: 80
effective length of query: 195
effective length of database: 9,754,400
effective search space: 1902108000
effective search space used: 1902108000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
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