Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000217-TA|BGIBMGA000217-PA|IPR013753|Ras
(275 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1357 + 35899480-35899578,35900247-35900334,35900438-359005... 49 5e-06
02_02_0624 - 12323702-12323777,12324219-12324304,12324360-123244... 49 5e-06
02_01_0155 - 1080923-1081024,1081111-1081176,1081306-1081370,108... 49 5e-06
06_01_0907 + 7001946-7002050,7002389-7002476,7002606-7002679,700... 46 3e-05
05_06_0061 + 25274693-25274794,25274982-25275069,25275186-252752... 46 4e-05
02_05_0708 - 31103246-31103359,31104146-31104178,31104297-311043... 46 4e-05
05_03_0590 - 15884485-15884489,15884702-15884790,15885086-158852... 36 0.047
07_03_1397 + 26269186-26269525,26269727-26269932,26270225-262703... 33 0.19
01_06_0186 + 27294973-27295211,27295610-27296045 33 0.25
09_02_0222 + 5968232-5968467,5970811-5971187,5972216-5972256,597... 33 0.33
01_05_0340 - 21139885-21139978,21140169-21140272,21140379-211405... 32 0.44
08_02_1318 - 26111031-26111276,26112139-26112427,26112936-261130... 32 0.58
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 32 0.58
05_07_0205 - 28402436-28402505,28402604-28402681,28402789-284029... 32 0.58
01_05_0673 + 24183512-24183514,24183625-24183694,24184203-241842... 32 0.58
10_06_0181 - 11532765-11533203,11536867-11537036 31 0.76
02_05_0161 + 26384079-26384086,26386173-26386226,26386376-263864... 31 1.0
01_01_0565 - 4159946-4160042,4160140-4160243,4160378-4160533,416... 31 1.0
07_03_0473 - 18525712-18525858,18526049-18526162,18526442-185265... 31 1.3
01_01_0909 - 7163886-7163931,7164148-7164254,7164370-7164435,716... 31 1.3
05_06_0075 - 25379820-25380776,25380851-25381179,25381255-25381453 30 2.3
01_01_0893 + 7043130-7043182,7043309-7043335,7043461-7043560,704... 30 2.3
09_02_0464 - 9591139-9591571,9592601-9592818 29 3.1
07_03_0910 - 22519006-22519159,22519300-22519355,22519433-225197... 29 3.1
06_03_0414 - 20548577-20549006,20553521-20553744 29 3.1
05_07_0127 - 27872803-27873238,27873842-27874059 29 3.1
05_06_0082 - 25425050-25425479,25426551-25426783 29 3.1
05_01_0129 - 872127-872681,872762-873070,873180-873347 29 3.1
04_01_0215 - 2728413-2728599,2729794-2730318,2730548-2730755,273... 29 4.1
03_06_0637 - 35219212-35219754,35220405-35220587 29 4.1
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 29 4.1
11_01_0582 - 4632377-4632677,4632757-4632927,4633010-4633842,463... 29 5.4
10_03_0045 - 7353148-7353448,7353528-7353698,7353781-7354613,735... 29 5.4
09_06_0029 + 20336634-20336881,20337737-20338208 29 5.4
07_03_1160 - 24430240-24431268 29 5.4
07_03_0729 - 21025525-21025825,21025905-21026075,21026158-210269... 29 5.4
07_03_0537 - 19218461-19218982,19219482-19219868,19219993-192201... 29 5.4
05_01_0036 + 253734-253904,255216-255707 29 5.4
03_01_0647 + 4745788-4745907,4746510-4746591,4746847-4746958,474... 29 5.4
02_05_1184 + 34802749-34802892,34802981-34803220,34803636-348039... 29 5.4
01_06_0712 + 31397167-31397402,31399823-31400252 29 5.4
12_01_0705 + 6065932-6066061,6066150-6066883,6066962-6067423,606... 28 7.1
07_03_0982 + 23116343-23117089,23117227-23117313,23117424-231175... 28 7.1
06_03_1387 - 29820358-29821035 28 7.1
03_05_0459 + 24533233-24533278,24533881-24534167,24534287-245345... 28 7.1
03_01_0326 + 2535800-2535938,2536891-2536959,2537310-2537375,253... 28 7.1
08_02_0391 - 16612929-16613867 28 9.4
07_03_0961 - 22921761-22921850,22922204-22922338,22922409-229225... 28 9.4
05_03_0370 + 13144612-13144639,13144749-13145260,13146995-131473... 28 9.4
03_06_0501 - 34380155-34380637,34380961-34381029,34382206-343822... 28 9.4
01_07_0078 - 40923115-40924016,40924341-40924416,40924686-40924718 28 9.4
01_06_1343 - 36461476-36461961,36463355-36463519 28 9.4
01_01_0796 + 6190931-6192745 28 9.4
01_01_0539 + 3952039-3952219,3952295-3952984,3953115-3953191,395... 28 9.4
>02_05_1357 +
35899480-35899578,35900247-35900334,35900438-35900592,
35900652-35900715,35902910-35902974,35903061-35903126,
35903644-35903745
Length = 212
Score = 48.8 bits (111), Expect = 5e-06
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV VGDGAVGK+ ++ +Y +TF +Y PT +D F+ +
Sbjct: 9 CVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANV 47
>02_02_0624 -
12323702-12323777,12324219-12324304,12324360-12324425,
12324650-12324762,12324793-12324856,12324950-12325059,
12325473-12325560,12325651-12325749
Length = 233
Score = 48.8 bits (111), Expect = 5e-06
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV VGDGAVGK+ ++ +Y +TF +Y PT +D F+ +
Sbjct: 9 CVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANV 47
>02_01_0155 -
1080923-1081024,1081111-1081176,1081306-1081370,
1081938-1082001,1082359-1082507,1082591-1082678,
1083757-1083855
Length = 210
Score = 48.8 bits (111), Expect = 5e-06
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV VGDGAVGK+ ++ +Y +TF +Y PT +D F+ +
Sbjct: 9 CVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANV 47
>06_01_0907 +
7001946-7002050,7002389-7002476,7002606-7002679,
7002829-7002892,7004355-7004419,7004557-7004622,
7004725-7004757,7004968-7005045,7005295-7005303
Length = 193
Score = 46.0 bits (104), Expect = 3e-05
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV VGDGAVGK+ ++ Y + F +Y PT +D F+ +
Sbjct: 11 CVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANV 49
>05_06_0061 +
25274693-25274794,25274982-25275069,25275186-25275295,
25275542-25275605,25275713-25275777,25275864-25275929,
25276084-25276199,25276382-25276415
Length = 214
Score = 45.6 bits (103), Expect = 4e-05
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV VGDGAVGK+ ++ Y + F +Y PT +D F+ +
Sbjct: 10 CVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANV 48
>02_05_0708 -
31103246-31103359,31104146-31104178,31104297-31104362,
31104532-31104596,31105456-31105519,31105629-31105738,
31105886-31105973,31106328-31106432
Length = 214
Score = 45.6 bits (103), Expect = 4e-05
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV VGDGAVGK+ ++ Y + F +Y PT +D F+ +
Sbjct: 11 CVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANV 49
>05_03_0590 -
15884485-15884489,15884702-15884790,15885086-15885251,
15885333-15885393,15886256-15886392,15887936-15888002
Length = 174
Score = 35.5 bits (78), Expect = 0.047
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTF 265
VL+GDG VGK+SL+ Y D F ++ + T ++
Sbjct: 18 VLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASY 51
>07_03_1397 +
26269186-26269525,26269727-26269932,26270225-26270327,
26270570-26270577
Length = 218
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKIQKQPIL 275
VL+GD +VGKS+L+A +A R E+ P + T + Q Q ++
Sbjct: 18 VLLGDSSVGKSNLLARFA----RNEFYPNSKSTIGVEFQTQKLV 57
>01_06_0186 + 27294973-27295211,27295610-27296045
Length = 224
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD VGKS+L++ +A+D F E + T
Sbjct: 23 VLIGDSGVGKSNLLSRFARDEFSLETRST 51
>09_02_0222 +
5968232-5968467,5970811-5971187,5972216-5972256,
5972808-5972843
Length = 229
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD AVGKS L+A +A++ F + + T
Sbjct: 22 VLIGDSAVGKSQLLARFARNEFNLDSKAT 50
>01_05_0340 -
21139885-21139978,21140169-21140272,21140379-21140534,
21140622-21140693,21140782-21140829,21140923-21140970,
21141807-21141879,21142333-21142346
Length = 202
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+L+GD VGKS L+ +A D++ E Y T
Sbjct: 12 LLIGDSGVGKSCLLLRFADDSYLESYIST 40
>08_02_1318 -
26111031-26111276,26112139-26112427,26112936-26113036,
26113628-26113878,26114842-26114865,26115793-26116129
Length = 415
Score = 31.9 bits (69), Expect = 0.58
Identities = 12/22 (54%), Positives = 19/22 (86%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTF 253
V++GD AVGKS+L++ YA++ F
Sbjct: 17 VIIGDSAVGKSNLLSRYARNEF 38
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 31.9 bits (69), Expect = 0.58
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+LVGDG GK++ + + F + Y+PT
Sbjct: 445 ILVGDGGTGKTTFVKRHITGEFEKRYEPT 473
>05_07_0205 -
28402436-28402505,28402604-28402681,28402789-28402968,
28403051-28403140,28403258-28403375,28403461-28403517,
28404155-28404224,28404317-28404319
Length = 221
Score = 31.9 bits (69), Expect = 0.58
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
V+VGDG GK++ + + F ++Y+PT
Sbjct: 17 VIVGDGGTGKTTFVKRHLTGEFEKKYEPT 45
>01_05_0673 +
24183512-24183514,24183625-24183694,24184203-24184259,
24184348-24184465,24185044-24185133,24185209-24185388,
24185474-24185551,24185642-24185711
Length = 221
Score = 31.9 bits (69), Expect = 0.58
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
V+VGDG GK++ + + F ++Y+PT
Sbjct: 17 VIVGDGGTGKTTFVKRHLTGEFEKKYEPT 45
>10_06_0181 - 11532765-11533203,11536867-11537036
Length = 202
Score = 31.5 bits (68), Expect = 0.76
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD AVGKS ++A +A++ F + + T
Sbjct: 14 VLIGDSAVGKSQILARFARNEFSIDSKAT 42
>02_05_0161 +
26384079-26384086,26386173-26386226,26386376-26386448,
26386775-26386822,26386906-26386953,26387990-26388061,
26388156-26388311,26388428-26388531,26388628-26388724
Length = 219
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+L+GD VGKS L+ +A D++ + Y T
Sbjct: 28 LLIGDSGVGKSCLLLRFADDSYLDSYIST 56
>01_01_0565 -
4159946-4160042,4160140-4160243,4160378-4160533,
4160629-4160700,4161796-4161843,4161923-4161970,
4162295-4162367,4163188-4163201
Length = 203
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+L+GD VGKS L+ +A D++ + Y T
Sbjct: 12 LLIGDSGVGKSCLLLRFADDSYLDSYIST 40
>07_03_0473 -
18525712-18525858,18526049-18526162,18526442-18526522,
18526787-18526865,18526902-18526996,18527092-18527170,
18527339-18527450,18527682-18527770,18527868-18527938,
18528846-18528962
Length = 327
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
V +GD +VGK+S+I + D F YQ T
Sbjct: 13 VFLGDQSVGKTSIITRFMYDKFDNTYQAT 41
>01_01_0909 -
7163886-7163931,7164148-7164254,7164370-7164435,
7164720-7164784,7164937-7165000,7165685-7165794,
7165972-7166059,7166100-7166297
Length = 247
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTF 253
CV VGDGAVGK+ ++ Y + F
Sbjct: 13 CVTVGDGAVGKTCMLICYTCNKF 35
>05_06_0075 - 25379820-25380776,25380851-25381179,25381255-25381453
Length = 494
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 106 FDNHEPTEYSTAQYRAPTVHYAKPPIPANGIATRPPERDGPFVFGIHSPSQFPI 159
F P + AQ R PT+ + P PA+ RP +R P + G P + P+
Sbjct: 317 FQQGFPVHNNRAQMRWPTMQHNCMPSPAHSFQPRPVQR-RPVLVGQAPPQRRPV 369
>01_01_0893 +
7043130-7043182,7043309-7043335,7043461-7043560,
7045110-7045256,7045342-7045422,7045509-7045654,
7046030-7046099
Length = 207
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+++GD VGK+SL+ Y F +Y+ T
Sbjct: 12 IILGDSGVGKTSLMNQYVNKKFSNQYKAT 40
>09_02_0464 - 9591139-9591571,9592601-9592818
Length = 216
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD VGKS+L++ + ++ F E + T
Sbjct: 16 VLIGDSGVGKSNLLSRFTRNEFSLESKST 44
>07_03_0910 -
22519006-22519159,22519300-22519355,22519433-22519702,
22519808-22519986,22520146-22520374,22520985-22521180,
22521728-22521818,22521921-22521975,22522812-22522902,
22523366-22523424,22524000-22524050
Length = 476
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Query: 107 DNHEPTEYSTAQYRAPTVHYAKPPIPANGIATRPPERDGPFVFGIHSPSQFPIPRKDDDD 166
+N++ + + P + +PANG A+ + SP+ +P + +
Sbjct: 410 NNNQEFSFGNFNFSTPGAYNTSSSVPANGAASAAANKST-------SPTSSSLPSQSGKE 462
Query: 167 YDYSEVTE 174
YD+S +T+
Sbjct: 463 YDFSSLTQ 470
>06_03_0414 - 20548577-20549006,20553521-20553744
Length = 217
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD VGKS+L++ + ++ F E + T
Sbjct: 18 VLIGDSGVGKSNLLSRFTRNEFSLESKST 46
>05_07_0127 - 27872803-27873238,27873842-27874059
Length = 217
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD VGKS+L++ + ++ F E + T
Sbjct: 16 VLIGDSGVGKSNLLSRFTRNEFSLESKST 44
>05_06_0082 - 25425050-25425479,25426551-25426783
Length = 220
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD VGKS+L++ + ++ F E + T
Sbjct: 21 VLIGDSGVGKSNLLSRFTKNEFSLESKST 49
>05_01_0129 - 872127-872681,872762-873070,873180-873347
Length = 343
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Query: 130 PIPANGIATRPPERDGPFVFGIHSPSQFPIPRKDDDDYDYSEVTEENGRTVIRDDDSE 187
P+P ATR P R P V H +++ P+K ++D G + DDD E
Sbjct: 99 PLPVCDRATRFPPRHPPLVQFPHRDTEYYAPKKKKKNHD-------AGAVAVEDDDDE 149
>04_01_0215 -
2728413-2728599,2729794-2730318,2730548-2730755,
2730946-2731001,2731294-2731394,2731923-2732150
Length = 434
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 102 LVFRFDNHEPTEYSTAQYRAPTVHYAKPPIPANGIATRPPERDGP 146
L++ +P AP+ A PP+PA ++++ P DGP
Sbjct: 229 LIYNSTWSKPCRIVIPTSHAPSAKSASPPLPALAMSSQAPCADGP 273
>03_06_0637 - 35219212-35219754,35220405-35220587
Length = 241
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD VGKS+L++ + +++F + + T
Sbjct: 22 VLIGDSGVGKSNLLSRFTRNSFSLDSKST 50
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 110 EPTEYSTAQYRAPTVHYAK-PPIPANGIATRP--PERDGPFVFGIHSPSQFPIP 160
+PTE QY+AP V + PP P T P P+ P G+ +PS P+P
Sbjct: 329 QPTETMHQQYQAPPVPQPQAPPAPPQQYQTPPQFPQYSQPPQSGMVNPST-PLP 381
>11_01_0582 -
4632377-4632677,4632757-4632927,4633010-4633842,
4633924-4634385,4634464-4635197,4635286-4635415
Length = 876
Score = 28.7 bits (61), Expect = 5.4
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 47 LPAPRNLPDYRTDYRKPSNVELEKRLQESRAREKISYFQDKVTPPELNLDRREAELVFRF 106
+P LP YR+ YRK V E+R +A K+ Q+ E ++D R E V +
Sbjct: 333 VPWKHGLPQYRSQYRK-RKVSKEERDARLKAELKVEVIQEL----EASMDARVEERVNKV 387
Query: 107 --DNHEPTEYSTAQYRAPTV-HYAKP 129
D + P + A P V H A P
Sbjct: 388 LADMNIPRVTTPAVQPTPRVQHDASP 413
>10_03_0045 -
7353148-7353448,7353528-7353698,7353781-7354613,
7354695-7355156,7355235-7355968,7356057-7356186
Length = 876
Score = 28.7 bits (61), Expect = 5.4
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 47 LPAPRNLPDYRTDYRKPSNVELEKRLQESRAREKISYFQDKVTPPELNLDRREAELVFRF 106
+P LP YR+ YRK V E+R +A K+ Q+ E ++D R E V +
Sbjct: 333 VPWKHGLPQYRSQYRK-RKVSKEERDARLKAELKVEVIQEL----EASMDARVEERVNKV 387
Query: 107 --DNHEPTEYSTAQYRAPTV-HYAKP 129
D + P + A P V H A P
Sbjct: 388 LADMNIPRVTTPAVQPTPRVQHDASP 413
>09_06_0029 + 20336634-20336881,20337737-20338208
Length = 239
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTF 253
V+VGD AVGK+ L+ + +D F
Sbjct: 26 VVVGDSAVGKTQLLGRFTKDEF 47
>07_03_1160 - 24430240-24431268
Length = 342
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 129 PPIPANGIATRPPERDGPFVFGIHSPSQFPIPRKDDDDYDYS 170
PP+P + +P + P G P P+P+ D Y+
Sbjct: 167 PPLPNPNVPPKPDQPPQPIPNGPPKPDMLPMPKPDGSPNSYA 208
>07_03_0729 -
21025525-21025825,21025905-21026075,21026158-21026990,
21027072-21027533,21027612-21028345,21028434-21028563
Length = 876
Score = 28.7 bits (61), Expect = 5.4
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 47 LPAPRNLPDYRTDYRKPSNVELEKRLQESRAREKISYFQDKVTPPELNLDRREAELVFRF 106
+P LP YR+ YRK V E+R +A K+ Q+ E ++D R E V +
Sbjct: 333 VPWKHGLPQYRSQYRK-RKVSKEERDARLKAELKVEVIQEL----EASMDARVEERVNKV 387
Query: 107 --DNHEPTEYSTAQYRAPTV-HYAKP 129
D + P + A P V H A P
Sbjct: 388 LADMNIPRVTTPAVQPTPRVQHDASP 413
>07_03_0537 -
19218461-19218982,19219482-19219868,19219993-19220154,
19220464-19221117,19221233-19221277,19223300-19223845,
19223930-19224307,19224642-19225313,19225373-19225456
Length = 1149
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 71 RLQESRAREKISYFQDKVTPPELNLDRREAELV 103
R + R R K S+FQD +PP DR A L+
Sbjct: 437 RSKNPRKRGKPSFFQDPSSPPNSRADRFPAVLI 469
>05_01_0036 + 253734-253904,255216-255707
Length = 220
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD VGKS+L++ + ++ F E + T
Sbjct: 18 VLIGDSGVGKSNLLSRFTRNEFCLESKST 46
>03_01_0647 +
4745788-4745907,4746510-4746591,4746847-4746958,
4747607-4747697,4747805-4747969
Length = 189
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQ 258
V +GD AVGK+++I + D F YQ
Sbjct: 14 VFLGDQAVGKTAIITRFMYDKFDATYQ 40
>02_05_1184 +
34802749-34802892,34802981-34803220,34803636-34803950,
34804030-34804209,34804312-34804504,34805062-34805324,
34805461-34805590,34805719-34805786,34805951-34806199,
34806284-34806357,34808052-34808143,34808603-34808685,
34810337-34810408,34810558-34810683,34810996-34811037
Length = 756
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 164 DDDYDYSEVTEENGRTVIRDDDSEDLNCCDKVNDWAVRDKKNRRTLNR 211
DDD D SE +N TV+ DD D++ + +D++ +K+ T R
Sbjct: 555 DDDDDGSEDDFKNRPTVLDQDDDSDVSAVED-DDYSKFEKEVEETFQR 601
>01_06_0712 + 31397167-31397402,31399823-31400252
Length = 221
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD VGKS+L++ + ++ F E + T
Sbjct: 22 VLIGDSGVGKSNLLSRFTKNEFCLESKST 50
>12_01_0705 +
6065932-6066061,6066150-6066883,6066962-6067423,
6067505-6068337,6068420-6068590,6068670-6068919,
6069367-6069405,6069598-6069672
Length = 897
Score = 28.3 bits (60), Expect = 7.1
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 47 LPAPRNLPDYRTDYRKPSNVELEKRLQESRAREKISYFQDKVTPPELNLDRREAELVFRF 106
+P LP YR+ YRK V E+R +A K+ Q+ E ++D R E V +
Sbjct: 333 VPWKHGLPQYRSQYRK-RKVSKEERDARLKAELKVEVIQEL----EASMDARVEERVNKV 387
Query: 107 --DNHEPTEYSTAQYRAPTV-HYAKP 129
D + P + A P V H A P
Sbjct: 388 LADMNIPRVTTPAVQPTPGVQHDASP 413
>07_03_0982 +
23116343-23117089,23117227-23117313,23117424-23117555,
23118135-23118269,23118644-23118709,23118797-23118907,
23119237-23119329,23119555-23119659,23119752-23119829
Length = 517
Score = 28.3 bits (60), Expect = 7.1
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 14/72 (19%)
Query: 106 FDNHEPTEYSTAQYRAPTVHYAKPPIPANGIATR----------PPERDGPFVFGIHSPS 155
++N P Y AP +Y+ PP A G+AT+ P D P+ G P
Sbjct: 80 YNNPNPAPYPPESSPAPAPYYSYPPTAA-GVATQHAPAAEPSPAPLPYDAPYYGGYQPP- 137
Query: 156 QFPIPRKDDDDY 167
P DDDY
Sbjct: 138 --PTAGYGDDDY 147
>06_03_1387 - 29820358-29821035
Length = 225
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTF 253
V++GD AVGK+ L+ + +D F
Sbjct: 11 VVIGDSAVGKTQLLGRFTKDEF 32
>03_05_0459 +
24533233-24533278,24533881-24534167,24534287-24534568,
24534628-24534682,24534895-24534935,24537484-24537549
Length = 258
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 58 TDYRKPSNVELEKRLQESRAREKISYFQ 85
T+ RK +EL++ Q++ REK SY Q
Sbjct: 61 TEIRKGEGMELDQLFQDAYLREKTSYIQ 88
>03_01_0326 +
2535800-2535938,2536891-2536959,2537310-2537375,
2537979-2538100,2538501-2538629,2540462-2540569
Length = 210
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 232 VLVGDGAVGKSSLIAAYAQDT-FREEYQPT 260
+L+GD AVGKSSL+ ++ + +E PT
Sbjct: 16 LLIGDSAVGKSSLLVSFVSASHIDDEIAPT 45
>08_02_0391 - 16612929-16613867
Length = 312
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/78 (24%), Positives = 28/78 (35%)
Query: 116 TAQYRAPTVHYAKPPIPANGIATRPPERDGPFVFGIHSPSQFPIPRKDDDDYDYSEVTEE 175
TA +P+ A PP + AT PP PFV + +DD + +
Sbjct: 222 TASSASPSSKEAPPPSSSASAATPPPLNPPPFVVDTFLGEDDHLAADEDDRFGFGLADLG 281
Query: 176 NGRTVIRDDDSEDLNCCD 193
+ DD+ D D
Sbjct: 282 HLPLPFLDDNDMDFKLSD 299
>07_03_0961 -
22921761-22921850,22922204-22922338,22922409-22922531,
22922621-22922707,22922780-22922831,22922939-22923063,
22923724-22923932,22924206-22924407,22924526-22924630,
22925353-22925414,22925755-22925944,22926017-22926112,
22926203-22926305,22927019-22927122,22927264-22927395,
22928257-22928343,22929121-22929206,22929291-22929383,
22932197-22932284,22932402-22932514,22932621-22932743,
22934153-22934204,22934365-22934408,22934498-22934571,
22934655-22934746,22935594-22935661,22937146-22937221,
22937323-22937679
Length = 1055
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 55 DYRTDYRKPSNVELEKRLQESRAREKISYFQDKVTPPELNLDRREAEL 102
++++D N++LEK RE+ ++F +++ L DR+EAE+
Sbjct: 938 EFKSDVNALINMKLEKY---KNIREESAFFWREISEGTLKFDRKEAEV 982
>05_03_0370 +
13144612-13144639,13144749-13145260,13146995-13147327,
13147690-13147699,13149704-13149816,13151187-13151258,
13151397-13151432,13151552-13151597,13151726-13151828,
13151916-13151973,13152231-13152281
Length = 453
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Query: 43 PHRPLPAPRNLPDYRTDYRKPSNVELEKRLQESRAREKISYFQDKVTPPELNLDRREAEL 102
PH P+ P +P R D +L L E RE + Y P L LD ++
Sbjct: 202 PH-PVQVPGEVP-LRRDLVPGGGAQLPGHLPEDYRREHLPYSGHGAAQPLLLLDTLDSSQ 259
Query: 103 VFRFDNHEP 111
R D H P
Sbjct: 260 NGRMDWHYP 268
>03_06_0501 -
34380155-34380637,34380961-34381029,34382206-34382229,
34382622-34382786
Length = 246
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD VGKS++++ + ++ F E + T
Sbjct: 16 VLIGDSGVGKSNILSRFTRNEFCLESKST 44
>01_07_0078 - 40923115-40924016,40924341-40924416,40924686-40924718
Length = 336
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 114 YSTAQYRAPTVHYAKPPIPANGIATRPPERDGP 146
Y+ A+ A +YA PP PA P R GP
Sbjct: 226 YNVARPTASAAYYAAPPAPAPMSMPMPMARPGP 258
>01_06_1343 - 36461476-36461961,36463355-36463519
Length = 216
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD VGKS++++ + ++ F E + T
Sbjct: 16 VLIGDSGVGKSNILSRFTRNEFFLESKST 44
>01_01_0796 + 6190931-6192745
Length = 604
Score = 27.9 bits (59), Expect = 9.4
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 61 RKPSNVELEKRLQESRAREKISYFQDKVTPPELNLDRREAELVFRFDNHEPTEYST-AQY 119
R P +E ES+ + ++ P L L R EA L+ EP ++ A
Sbjct: 271 RPPRFAGMEPSFLESQQAPPPAQVSTQLAP--LPLIREEAPLL-----QEPFLFADQAPV 323
Query: 120 RAPTVHYAKPPIPANGIATRPPERDGPFVFGIHSPSQFPIP 160
AP + P+ + + P PF+F H+P+ P+P
Sbjct: 324 LAPLPAPLQMPVAETHLPLQAPLLQEPFLFSDHAPTLAPLP 364
>01_01_0539 +
3952039-3952219,3952295-3952984,3953115-3953191,
3953356-3953931
Length = 507
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 161 RKDDDDYDYSEVTEENGRTVIRDDDSEDLN 190
R+DDDD D T N V DDD++++N
Sbjct: 467 REDDDDDDEMAATN-NAHAVDGDDDNDEIN 495
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.135 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,654,915
Number of Sequences: 37544
Number of extensions: 399437
Number of successful extensions: 1200
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1158
Number of HSP's gapped (non-prelim): 55
length of query: 275
length of database: 14,793,348
effective HSP length: 81
effective length of query: 194
effective length of database: 11,752,284
effective search space: 2279943096
effective search space used: 2279943096
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -