GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000217-TA|BGIBMGA000217-PA|IPR013753|Ras
         (275 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    47   7e-07
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            30   0.063
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   3.1  
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    23   7.2  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.5  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   9.5  

>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 46.8 bits (106), Expect = 7e-07
 Identities = 17/36 (47%), Positives = 27/36 (75%)

Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFN 266
           CV+VGDG VGK+ ++ +Y  D+F  EY PT++D ++
Sbjct: 9   CVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYS 44


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 30.3 bits (65), Expect = 0.063
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
           VL+G+ AVGKSSL+  + +  F E  + T
Sbjct: 28  VLLGESAVGKSSLVLRFVKGQFHEYQEST 56


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/40 (27%), Positives = 22/40 (55%)

Query: 54  PDYRTDYRKPSNVELEKRLQESRAREKISYFQDKVTPPEL 93
           P     +RK + ++L  RLQ+ + +++ S  Q +  P +L
Sbjct: 379 PRQSLPHRKQTQLQLSPRLQQQQQQQQQSQQQQQQQPQQL 418


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query: 149 FGIHSPSQFPIPRKDDDDYDYSEVTEENG 177
           FGI++ ++ P P     D  +++V    G
Sbjct: 52  FGINAETRVPFPNISPPDLSFADVVSRRG 80


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 14/46 (30%), Positives = 18/46 (39%)

Query: 118  QYRAPTVHYAKPPIPANGIATRPPERDGPFVFGIHSPSQFPIPRKD 163
            ++    V YA+P   A G   R   + G  V    S    P  RKD
Sbjct: 1554 EFGVTPVTYAQPSESAKGTTRRERSKQGRKVSDQSSSQTSPSKRKD 1599


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 81  ISYFQDKVTPPELNLDRREAELVFRFDNHEPTEYSTA 117
           +S+ +   TPPE   DR E  +   F  H P  +  A
Sbjct: 362 LSHLRGGRTPPETERDRLEHIVSDLFPQHPPLVWPEA 398


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.135    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 296,353
Number of Sequences: 2123
Number of extensions: 12343
Number of successful extensions: 31
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 24
Number of HSP's gapped (non-prelim): 7
length of query: 275
length of database: 516,269
effective HSP length: 63
effective length of query: 212
effective length of database: 382,520
effective search space: 81094240
effective search space used: 81094240
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)