Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000217-TA|BGIBMGA000217-PA|IPR013753|Ras
(275 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 47 1e-05
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 47 1e-05
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 47 1e-05
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 47 1e-05
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 47 1e-05
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 47 1e-05
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 46 2e-05
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 46 2e-05
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 46 2e-05
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 46 3e-05
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 45 7e-05
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 44 9e-05
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 42 5e-04
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 41 0.001
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 41 0.001
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 40 0.003
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 40 0.003
Z81039-11|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 38 0.006
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 37 0.018
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 37 0.018
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 35 0.055
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 35 0.055
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 35 0.055
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 35 0.055
AF045637-2|AAN63433.1| 168|Caenorhabditis elegans R-ras related... 35 0.055
AF045637-1|AAK72295.1| 212|Caenorhabditis elegans R-ras related... 35 0.055
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 35 0.073
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 35 0.073
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 34 0.096
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 34 0.096
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 34 0.096
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 34 0.13
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 33 0.29
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 32 0.39
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 31 0.68
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 31 0.68
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 31 1.2
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 31 1.2
U40030-6|AAA81135.3| 431|Caenorhabditis elegans Hypothetical pr... 31 1.2
U40030-5|AAR12976.2| 506|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 30 2.1
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 30 2.1
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 30 2.1
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 30 2.1
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z79596-7|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 29 4.8
Z48582-7|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 4.8
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 29 4.8
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr... 29 4.8
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 29 4.8
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 28 6.3
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 28 8.3
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 28 8.3
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 28 8.3
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 28 8.3
AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical ... 28 8.3
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 28 8.3
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV+VGDGAVGK+ L+ +Y + F EY PT +D ++ +
Sbjct: 6 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANV 44
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV+VGDGAVGK+ L+ +Y + F EY PT +D ++ +
Sbjct: 6 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANV 44
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV+VGDGAVGK+ L+ +Y + F EY PT +D ++ +
Sbjct: 6 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANV 44
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV+VGDGAVGK+ L+ +Y + F EY PT +D ++ +
Sbjct: 6 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANV 44
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV+VGDGAVGK+ L+ +Y + F EY PT +D ++ +
Sbjct: 6 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANV 44
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV+VGDGAVGK+ L+ +Y + F EY PT +D ++ +
Sbjct: 6 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANV 44
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTF 265
CV+VGDGAVGK+ L+ +Y + F EY PT +D +
Sbjct: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 40
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTF 265
CV+VGDGAVGK+ L+ +Y + F EY PT +D +
Sbjct: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 40
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTF 265
CV+VGDGAVGK+ L+ +Y + F EY PT +D +
Sbjct: 3 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 37
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 46.0 bits (104), Expect = 3e-05
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV+VGDG VGK+ ++ +Y D+F +Y PT +D ++ ++
Sbjct: 10 CVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQM 48
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 46.0 bits (104), Expect = 3e-05
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV+VGDG VGK+ ++ +Y D+F +Y PT +D ++ ++
Sbjct: 10 CVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQM 48
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFN--GKIQKQPI 274
C+ VG+ AVGK+S+I +Y + + Y PTA+D F+ + K+PI
Sbjct: 12 CIFVGNAAVGKTSMIVSYTTNVYPHNYVPTAFDNFSVVVLVDKKPI 57
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV+VGDGAVGK+ L+ +Y + F EY T +DT++ +
Sbjct: 6 CVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNV 44
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 231 CVLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
CV+VGDGAVGK+ L+ +Y + F EY T +DT++ +
Sbjct: 6 CVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNV 44
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
++VG G VGKS+L + D F EEY+PT D++ K+
Sbjct: 21 IMVGTGGVGKSALTLQFMYDEFVEEYEPTKADSYRKKV 58
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
V+VGDG VGKS+L Q+ F EEY PT D++ ++
Sbjct: 7 VVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYRKQV 44
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
V+VGDG VGKS+L Q+ F EEY PT D++ ++
Sbjct: 10 VVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYRKQV 47
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKIQ 270
V+VGDGA GK+ L+ +++D F + Y PT ++ + I+
Sbjct: 9 VIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIE 47
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKIQ 270
V+VGDGA GK+ L+ +++D F + Y PT ++ + I+
Sbjct: 9 VIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIE 47
>Z81039-11|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKIQ 270
V++G G VGKS+L + TF E+Y PT D + +I+
Sbjct: 7 VVLGSGGVGKSALTVQFVSSTFIEKYDPTIEDFYRKEIE 45
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKIQ 270
V++G G VGKS+L + Q F E+Y PT D++ +++
Sbjct: 7 VVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVE 45
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTF 265
V++GDG VGKSSL + Q F + Y PT D +
Sbjct: 21 VVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQY 54
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTF 265
V++GDG VGKSSL + Q F + Y PT D +
Sbjct: 21 VVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQY 54
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 35.1 bits (77), Expect = 0.055
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTF 265
V+VG G VGKS+L + Q F ++Y PT D++
Sbjct: 21 VVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSY 54
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 35.1 bits (77), Expect = 0.055
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTF 265
V+VG G VGKS+L + Q F ++Y PT D++
Sbjct: 21 VVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSY 54
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 35.1 bits (77), Expect = 0.055
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTF 265
V+VG G VGKS+L + Q F ++Y PT D++
Sbjct: 21 VVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSY 54
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 35.1 bits (77), Expect = 0.055
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTF 265
V+VG G VGKS+L + Q F ++Y PT D++
Sbjct: 21 VVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSY 54
>AF045637-2|AAN63433.1| 168|Caenorhabditis elegans R-ras related
protein 1, isoform b protein.
Length = 168
Score = 35.1 bits (77), Expect = 0.055
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTF 265
V+VG G VGKS+L + Q F ++Y PT D++
Sbjct: 21 VVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSY 54
>AF045637-1|AAK72295.1| 212|Caenorhabditis elegans R-ras related
protein 1, isoform a protein.
Length = 212
Score = 35.1 bits (77), Expect = 0.055
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTF 265
V+VG G VGKS+L + Q F ++Y PT D++
Sbjct: 21 VVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSY 54
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 34.7 bits (76), Expect = 0.073
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+++GD VGKSSL+ +A +TF E Y T
Sbjct: 14 LIIGDSGVGKSSLLLRFADNTFSENYITT 42
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 34.7 bits (76), Expect = 0.073
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+++GD VGKSSL+ +A +TF E Y T
Sbjct: 14 LIIGDSGVGKSSLLLRFADNTFSENYITT 42
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 34.3 bits (75), Expect = 0.096
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+L+GD VGKS L+ +A DT+ E Y T
Sbjct: 15 LLIGDSGVGKSCLLLRFADDTYTESYIST 43
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 34.3 bits (75), Expect = 0.096
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTF 265
V+VGD GK+SL+ AY + F + Y T +D +
Sbjct: 8 VVVGDTYTGKTSLLVAYTKKQFLDNYTTTVFDNW 41
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 34.3 bits (75), Expect = 0.096
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+L+GD VGKS L+ +A DT+ E Y T
Sbjct: 15 LLIGDSGVGKSCLLLRFADDTYTESYIST 43
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT-AYDTFNGKI 269
V+VGDGA GK+S+ +A+++F + Y T D F+ +I
Sbjct: 39 VVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRI 77
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKIQK 271
V++G+G VGKS+L Y Q F Y T D++ K+ K
Sbjct: 7 VVLGNGGVGKSALTLQYVQGIFVHTYDATIEDSYR-KLSK 45
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGK 268
VL+G+G VGKSSL+ + ++ F ++ T +F K
Sbjct: 16 VLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNK 52
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 79 EKISYFQDKVTPPELNLDRREAELVFRFDNHEPTEYSTAQY-RAPT 123
+ + ++ D+ TPP + D + + NHEPT ST Y +PT
Sbjct: 218 DDVRHYADETTPPPVLHDVADRYSTVAYMNHEPTHNSTRVYSHSPT 263
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 79 EKISYFQDKVTPPELNLDRREAELVFRFDNHEPTEYSTAQY-RAPT 123
+ + ++ D+ TPP + D + + NHEPT ST Y +PT
Sbjct: 440 DDVRHYADETTPPPVLHDVADRYSTVAYMNHEPTHNSTRVYSHSPT 485
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
V +G+ +VGK+SLI + D+F YQ T
Sbjct: 14 VFLGEQSVGKTSLITRFMYDSFDNTYQAT 42
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
V +G+ +VGK+SLI + D+F YQ T
Sbjct: 14 VFLGEQSVGKTSLITRFMYDSFDNTYQAT 42
>U40030-6|AAA81135.3| 431|Caenorhabditis elegans Hypothetical
protein T13C2.3a protein.
Length = 431
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Query: 67 ELEKRLQESRAREKISYFQDKVTPPELNLDRREAELVFRFDNHEPTEYSTAQYRAPTVHY 126
E +KR + + I D V ELN + + EL+ R P E +T PT+
Sbjct: 132 ETKKRYKRLALNDYIEDEDDYVNAVELNFEDTDLELITR---EPPVETTTTTTLKPTLPS 188
Query: 127 AKPPIPANGIATRPP 141
K P+ + + T P
Sbjct: 189 LKLPMSLDDLTTTKP 203
>U40030-5|AAR12976.2| 506|Caenorhabditis elegans Hypothetical
protein T13C2.3b protein.
Length = 506
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Query: 67 ELEKRLQESRAREKISYFQDKVTPPELNLDRREAELVFRFDNHEPTEYSTAQYRAPTVHY 126
E +KR + + I D V ELN + + EL+ R P E +T PT+
Sbjct: 207 ETKKRYKRLALNDYIEDEDDYVNAVELNFEDTDLELITR---EPPVETTTTTTLKPTLPS 263
Query: 127 AKPPIPANGIATRPP 141
K P+ + + T P
Sbjct: 264 LKLPMSLDDLTTTKP 278
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+G+ AVGKSSL+ + + F E + T
Sbjct: 23 VLLGESAVGKSSLVLRFVKGQFHEYQEST 51
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
VL+G+ VGKS+L++ + ++ F + +PT F KI
Sbjct: 12 VLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKI 49
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
V +G+ +VGK+S+I + D+F YQ T
Sbjct: 15 VFLGEQSVGKTSIITRFMYDSFDNTYQAT 43
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD VGKS+L++ + ++ F E + T
Sbjct: 15 VLIGDSGVGKSNLLSRFTRNEFHLESKST 43
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
V +G+ +VGK+S+I + D+F YQ T
Sbjct: 15 VFLGEQSVGKTSIITRFMYDSFDNTYQAT 43
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VL+GD VGKS+L++ + ++ F E + T
Sbjct: 15 VLIGDSGVGKSNLLSRFTRNEFNLESKST 43
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 163 DDDDYDYSEVTEENGRTVIRDDDSEDLNCCDKVNDWAVRDKKNRRT 208
DDDD D + +++G +DD +D + D ND D KN++T
Sbjct: 266 DDDDGDDDDDEKDDGNDAEKDDGDDD-DDDDDGNDDDEEDGKNKKT 310
>Z79596-7|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 163 DDDDYDYSEVTEENGRTVIRDDDSEDLNCCDKVNDWAVRDKKNRRT 208
DDDD D + +++G +DD +D + D ND D KN++T
Sbjct: 266 DDDDGDDDDDEKDDGNDAEKDDGDDD-DDDDDGNDDDEEDGKNKKT 310
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+++GD VGK+SL+ Y F +Y+ T
Sbjct: 13 IILGDSGVGKTSLMNQYVNRRFSNQYKAT 41
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTF 253
V++GDG VGKS+L+ + + F
Sbjct: 10 VIIGDGGVGKSNLLLRFTDELF 31
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
+++GD VGK+S+I + + F Y+ T F KI
Sbjct: 15 LVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKI 52
>Z48582-7|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 167 YDYSEVTEENGRTVIRDDDSEDLNCCDKVNDWAVRDKKNRRTLN 210
YDYS + G ++ DD S + +WA + TLN
Sbjct: 1820 YDYSNSVDGTGMVIVIDDASNIVGKTQNCEEWAFKLPSPASTLN 1863
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 167 YDYSEVTEENGRTVIRDDDSEDLNCCDKVNDWAVRDKKNRRTLN 210
YDYS + G ++ DD S + +WA + TLN
Sbjct: 1820 YDYSNSVDGTGMVIVIDDASNIVGKTQNCEEWAFKLPSPASTLN 1863
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT-AYDTFNGKIQKQP 273
+++GD VGKSSL+ + + E PT D + I+ +P
Sbjct: 21 IVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRP 63
>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
protein C50F2.2 protein.
Length = 1029
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 40 DIGPH--RPLPAPRNLPDYRTDYRKPSNVELEKRLQESRAREKISYFQDKV 88
D+ PH RP P LP ++ +KP+ +++++ E AR + S K+
Sbjct: 328 DLTPHPKRPPITPETLPSRNSEIQKPAASKIQEKKTEVIARSQKSEASTKI 378
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKI 269
+++GD VGK+S+I + + F Y+ T F KI
Sbjct: 15 LVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKI 52
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNGKIQKQP 273
V VGD AVGK+ + + + F+ + T F K K P
Sbjct: 206 VFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIP 247
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
VLVGDG GK++ + + F ++Y T
Sbjct: 13 VLVGDGGTGKTTFVKRHLTGEFEKKYVAT 41
>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
F54E4.1 protein.
Length = 2948
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 127 AKPPIPANGIATR--PPERDGPFVFGIHSPSQFPIPRKDDDDYDYSEVTEENGRTVIRDD 184
+K +P+ + ++ PP+++ +F PS + +DDD Y E+ G + D+
Sbjct: 2396 SKDSLPSEALHSKWVPPQKNIVQLFA-EKPS---VMMHEDDDDAYESDEEDKGNSYSDDE 2451
Query: 185 DSEDLNCCD 193
+ ED C+
Sbjct: 2452 EDEDTLSCE 2460
>Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 134 NG-IATRPPERDGPFVFGIHSPSQFPIPRK--DDDDYDYSEVTEENGRTVIRDDDSED 188
NG + RPP GP GI + P +K DDDD DY + T + D++ ED
Sbjct: 43 NGHLTARPPRTTGP---GIKYGEKKPKKQKGSDDDDEDYVDETMPSEDEEDFDNNEED 97
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 233 LVGDGAVGKSSLIAAYAQDTFREEYQPTAYD 263
++G VGKS+L+ + Q+ F E Y+ T D
Sbjct: 18 VMGYPHVGKSALVLRFTQNIFPERYESTIED 48
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Query: 115 STAQYRAPTVHYAKPPIPANGIATRPPERDGPFVFGIHSPSQFP 158
S A Y AP Y +PPI G PP P G+ + +P
Sbjct: 44 SAAAYAAPAAGYPRPPI---GYGAPPPPPPPPAFGGLGGGAAYP 84
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Query: 115 STAQYRAPTVHYAKPPIPANGIATRPPERDGPFVFGIHSPSQFP 158
S A Y AP Y +PPI G PP P G+ + +P
Sbjct: 44 SAAAYAAPAAGYPRPPI---GYGAPPPPPPPPAFGGLGGGAAYP 84
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Query: 115 STAQYRAPTVHYAKPPIPANGIATRPPERDGPFVFGIHSPSQFP 158
S A Y AP Y +PPI G PP P G+ + +P
Sbjct: 44 SAAAYAAPAAGYPRPPI---GYGAPPPPPPPPAFGGLGGGAAYP 84
>AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 134 NG-IATRPPERDGPFVFGIHSPSQFPIPRK--DDDDYDYSEVTEENGRTVIRDDDSED 188
NG + RPP GP GI + P +K DDDD DY + T + D++ ED
Sbjct: 43 NGHLTARPPRTTGP---GIKYGEKKPKKQKGSDDDDEDYVDETMPSEDEEDFDNNEED 97
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 232 VLVGDGAVGKSSLIAAYAQDTFREEYQPT 260
+++G+ VGKSSL+ + D F E T
Sbjct: 15 LIIGESGVGKSSLMLRFVDDVFDPEQAAT 43
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.135 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,392,327
Number of Sequences: 27539
Number of extensions: 342459
Number of successful extensions: 1241
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1165
Number of HSP's gapped (non-prelim): 84
length of query: 275
length of database: 12,573,161
effective HSP length: 80
effective length of query: 195
effective length of database: 10,370,041
effective search space: 2022157995
effective search space used: 2022157995
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
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