GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000215-TA|BGIBMGA000215-PA|IPR002159|CD36 antigen
         (483 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             84   7e-18
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            67   1e-12
AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione S-tran...    26   2.0  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   3.4  

>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 84.2 bits (199), Expect = 7e-18
 Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 30/272 (11%)

Query: 66  NDTINYKKIDVFLFKPELSGPGLTGEEVIVMPNIFMMAMALTVYREKPAMLNVAAKAING 125
           N TI+Y +  V++F  +LSG GL  ++V+++PNI M++ A +  +     L +A  +I  
Sbjct: 26  NGTISYNQKRVYIFNEDLSG-GLE-DDVVIVPNIPMLS-ATSESKHAARFLRLAMASIMD 82

Query: 126 IFDSPSDVFMRVKALDILFRGIIINCDRTEFAPKAACTTIKKEAPNGIVFEPNNQLRFSL 185
           I        +++K        + ++  +  +  +     + K+     VF    +L    
Sbjct: 83  I--------LKIKPF------VEVSVGQLLWGYEDPLLKLAKD-----VFPKEQKLPCEE 123

Query: 186 FGVR--NNSVDPHVVTVKRGVQNVMDVGRVVAIDGKTKMNVW-RDSCNEYQGTDGTVFPP 242
           FG+    NS     VTV  GV ++   G +   +G++    W  + CN   GTDG++FPP
Sbjct: 124 FGLMYGKNSTSKDTVTVWTGVDDITQYGIIDKYNGRSLQTHWLSEQCNRLNGTDGSIFPP 183

Query: 243 FLTHKDRLQSFSGDLCRSFKPWFQKK-TSYNGIKTNRYVANIGDF---ANDPELQCYCDS 298
            +T    L  +  DLCR     F+K+ T   G+K  R+    G       +PE      +
Sbjct: 184 RITKNSTLHVYEKDLCRLLPLSFEKEVTVRGGVKGYRFTTVPGCVCFGGQEPEQYVLLPA 243

Query: 299 PDKCPPKGLMDLYKC-IKAPMFVSMPHYLEGD 329
              C P GL ++  C   +P+ +S PH+   D
Sbjct: 244 GPPCAPHGLFNVSLCQYDSPILLSFPHFYLAD 275


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 66.9 bits (156), Expect = 1e-12
 Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 8/138 (5%)

Query: 199 TVKRGVQNVMDVGRVVAIDGKTKMNVWRDSCNEYQGTDGTVFPPFLTHKDRLQSFSGDLC 258
           T++ G   +  +G +   +G     ++R  C E  GT G ++PP L     +  F  D+C
Sbjct: 142 TMRTGADGLESMGFLTQWNGSPNTGMYRGKCGEVYGTSGELWPP-LAVSASITLFPSDIC 200

Query: 259 RSFKPWFQKKTSYNGIKTNRYVANIGDFAND---PELQCYCDS-PDKCP--PKGLMDLYK 312
           RS     +++ S   I+  +YV +   F N    PE  C+C+S P +CP    G+ +   
Sbjct: 201 RSHYAASREQVSLYNIQGTKYVGDDRVFDNGVKYPEASCWCNSNPTQCPDLKPGVFNRSA 260

Query: 313 C-IKAPMFVSMPHYLEGD 329
           C   +P FVS PH+   D
Sbjct: 261 CKYGSPTFVSFPHFYLAD 278


>AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione
           S-transferase D12 protein.
          Length = 211

 Score = 26.2 bits (55), Expect = 2.0
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 178 NNQLRFSLFGVRNNSV-DPHVVTVKRGVQNV 207
           N  L+  L  +RNN + D H+  VKRGV+ V
Sbjct: 105 NTTLQAVLSHLRNNPITDEHLAKVKRGVEIV 135


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 292 LQCYCDSPDKCPPKGLMDLYKCIKAPMFVS 321
           ++ Y D P +C   GL DL   + AP+  S
Sbjct: 426 VRLYADYPAECKEFGLSDLAAGVVAPLLAS 455


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.139    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,556
Number of Sequences: 2123
Number of extensions: 20595
Number of successful extensions: 41
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 34
Number of HSP's gapped (non-prelim): 6
length of query: 483
length of database: 516,269
effective HSP length: 67
effective length of query: 416
effective length of database: 374,028
effective search space: 155595648
effective search space used: 155595648
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 50 (24.2 bits)