Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000214-TA|BGIBMGA000214-PA|undefined
         (69 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    27   0.024
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    27   0.024
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   2.1  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    19   3.6  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    19   3.6  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    19   3.6  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    19   6.3  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    19   6.3  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    19   6.3  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    18   8.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    18   8.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    18   8.4  

>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 26.6 bits (56), Expect = 0.024
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 18  IYGSGKGAPKTGPGGRTPARRSQGRIAPDLRVQKHRFWIRKPRVQRPSDPQP 69
           + GS   +P  G G  +P  ++Q    P  R      WI+K   Q   +P+P
Sbjct: 91  VSGSEMSSPGAGSGNLSPQIQTQVARPPPARSPYE--WIKKTSYQSQPNPEP 140


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 26.6 bits (56), Expect = 0.024
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 18  IYGSGKGAPKTGPGGRTPARRSQGRIAPDLRVQKHRFWIRKPRVQRPSDPQP 69
           + GS   +P  G G  +P  ++Q    P  R      WI+K   Q   +P+P
Sbjct: 91  VSGSEMSSPGAGSGNLSPQIQTQVARPPPARSPYE--WIKKTSYQSQPNPEP 140


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 2.1
 Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 9/40 (22%)

Query: 5   TIERGNNFDITNLIYGSGKGAPKTGPGGRTPARRSQGRIA 44
           T+ +GNN D         +G P  GPG      +  G +A
Sbjct: 875 TLTKGNNHD---------QGVPSAGPGEAGEYTKQPGMLA 905



 Score = 19.4 bits (38), Expect = 3.6
 Identities = 12/39 (30%), Positives = 15/39 (38%)

Query: 31 GGRTPARRSQGRIAPDLRVQKHRFWIRKPRVQRPSDPQP 69
          G R    RS     PDL     R  +R    +RP   +P
Sbjct: 57 GTRALPLRSAVEHIPDLIADSRRLPLRDAVEKRPPPDEP 95



 Score = 18.2 bits (35), Expect = 8.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)

Query: 32   GRTPARRSQGRIAP 45
            G T  R  QGRI P
Sbjct: 2613 GWTVTRDPQGRIGP 2626


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 11/48 (22%), Positives = 19/48 (39%)

Query: 9   GNNFDITNLIYGSGKGAPKTGPGGRTPARRSQGRIAPDLRVQKHRFWI 56
           G+  D +N   GSG+G  +          + +  I P +     R W+
Sbjct: 150 GSPGDASNASIGSGEGTGEEDDDTNGKKNQKKRGIFPKVATNILRAWL 197


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 28  TGPGGRTPARRSQGRIAP 45
           T   G TP  ++QG ++P
Sbjct: 181 TPQAGSTPTYQTQGLLSP 198


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 11/48 (22%), Positives = 19/48 (39%)

Query: 9   GNNFDITNLIYGSGKGAPKTGPGGRTPARRSQGRIAPDLRVQKHRFWI 56
           G+  D +N   GSG+G  +          + +  I P +     R W+
Sbjct: 306 GSPGDASNASIGSGEGTGEEDDDTNGKKNQKKRGIFPKVATNILRAWL 353


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 18.6 bits (36), Expect = 6.3
 Identities = 6/13 (46%), Positives = 9/13 (69%)

Query: 23  KGAPKTGPGGRTP 35
           + + K+ PG RTP
Sbjct: 241 RSSQKSAPGKRTP 253


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 18.6 bits (36), Expect = 6.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 36  ARRSQGRIAPDLRVQKHRFWIRKP 59
           ARR+  +++P +   KH   I  P
Sbjct: 338 ARRTGRKVSPRVNTIKHTSCIPTP 361


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 18.6 bits (36), Expect = 6.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 36  ARRSQGRIAPDLRVQKHRFWIRKP 59
           ARR+  +++P +   KH   I  P
Sbjct: 338 ARRTGRKVSPRVNTIKHTSCIPTP 361


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory
          receptor candidate 57 protein.
          Length = 387

 Score = 18.2 bits (35), Expect = 8.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query: 2  IVITIERGNNFDITNLIYGS 21
          I+I +   +++   N IYGS
Sbjct: 35 IIIALYAHSSYGRENFIYGS 54


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 18.2 bits (35), Expect = 8.4
 Identities = 6/11 (54%), Positives = 8/11 (72%)

Query: 17  LIYGSGKGAPK 27
           LI+GSG   P+
Sbjct: 253 LIFGSGSATPE 263


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 18.2 bits (35), Expect = 8.4
 Identities = 7/17 (41%), Positives = 7/17 (41%)

Query: 20  GSGKGAPKTGPGGRTPA 36
           GSG   P  GP     A
Sbjct: 530 GSGNNQPPGGPSSHVSA 546


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.141    0.441 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,696
Number of Sequences: 317
Number of extensions: 718
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of query: 69
length of database: 114,650
effective HSP length: 44
effective length of query: 25
effective length of database: 100,702
effective search space:  2517550
effective search space used:  2517550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.0 bits)
S2: 35 (18.2 bits)