Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000214-TA|BGIBMGA000214-PA|undefined
         (69 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF488691-1|AAN45858.1| 1004|Homo sapiens friend of GATA-1 protein.     29   2.3  
BC032523-1|AAH32523.1|  676|Homo sapiens WD and tetratricopeptid...    29   3.1  
AL663123-11|CAI14787.1|  676|Homo sapiens WD and tetratricopepti...    29   3.1  
AL590640-1|CAH73549.1|  676|Homo sapiens WD and tetratricopeptid...    29   3.1  
AK001734-1|BAA91868.1|  615|Homo sapiens protein ( Homo sapiens ...    29   3.1  
AB028960-1|BAA82989.1|  488|Homo sapiens KIAA1037 protein protein.     29   3.1  
BC131534-1|AAI31535.1| 1386|Homo sapiens DEAH (Asp-Glu-Ala-Asp/H...    27   7.1  
BC060778-1|AAH60778.2|  658|Homo sapiens DHX57 protein protein.        27   7.1  
BC007542-1|AAH07542.1|   96|Homo sapiens KIAA1984 protein protein.     27   7.1  

>AF488691-1|AAN45858.1| 1004|Homo sapiens friend of GATA-1 protein.
          Length = 1004

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 4   ITIERGNNFDITNLIYGSGKGAPKTGPGGRTP 35
           IT    NN+ +   +Y SG+ AP+  P  R P
Sbjct: 582 ITFSNVNNYYVHKRLYCSGRRAPEDAPAARRP 613


>BC032523-1|AAH32523.1|  676|Homo sapiens WD and tetratricopeptide
           repeats 1 protein.
          Length = 676

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 13  DITNLIYGSGKGAPKTGPGGRTPAR-RSQGR 42
           DIT  ++    G  K GPGG  P R RS  R
Sbjct: 477 DITAALFSKNDGEEKKGPGGGAPVRLRSTSR 507


>AL663123-11|CAI14787.1|  676|Homo sapiens WD and tetratricopeptide
           repeats 1 protein.
          Length = 676

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 13  DITNLIYGSGKGAPKTGPGGRTPAR-RSQGR 42
           DIT  ++    G  K GPGG  P R RS  R
Sbjct: 477 DITAALFSKNDGEEKKGPGGGAPVRLRSTSR 507


>AL590640-1|CAH73549.1|  676|Homo sapiens WD and tetratricopeptide
           repeats 1 protein.
          Length = 676

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 13  DITNLIYGSGKGAPKTGPGGRTPAR-RSQGR 42
           DIT  ++    G  K GPGG  P R RS  R
Sbjct: 477 DITAALFSKNDGEEKKGPGGGAPVRLRSTSR 507


>AK001734-1|BAA91868.1|  615|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10872 fis, clone NT2RP4001725, weakly similar to
           GUANINE NUCLEOTIDE-BINDING PROTEIN BETA SUBUNIT. ).
          Length = 615

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 13  DITNLIYGSGKGAPKTGPGGRTPAR-RSQGR 42
           DIT  ++    G  K GPGG  P R RS  R
Sbjct: 478 DITAALFSKNDGEEKKGPGGGAPVRLRSTSR 508


>AB028960-1|BAA82989.1|  488|Homo sapiens KIAA1037 protein protein.
          Length = 488

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 13  DITNLIYGSGKGAPKTGPGGRTPAR-RSQGR 42
           DIT  ++    G  K GPGG  P R RS  R
Sbjct: 369 DITAALFSKNDGEEKKGPGGGAPVRLRSTSR 399


>BC131534-1|AAI31535.1| 1386|Homo sapiens DEAH
          (Asp-Glu-Ala-Asp/His) box polypeptide 57 protein.
          Length = 1386

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 20 GSGKGAPKTGPGGRTPARRSQG 41
          G GKG+ + G GGR+ A +S G
Sbjct: 14 GGGKGSSRGGRGGRSHASKSHG 35


>BC060778-1|AAH60778.2|  658|Homo sapiens DHX57 protein protein.
          Length = 658

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 20 GSGKGAPKTGPGGRTPARRSQG 41
          G GKG+ + G GGR+ A +S G
Sbjct: 14 GGGKGSSRGGRGGRSHASKSHG 35


>BC007542-1|AAH07542.1|   96|Homo sapiens KIAA1984 protein
          protein.
          Length = 96

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)

Query: 20 GSGKGAPKTGPGGRTPARRSQGRIAPDLRVQKHRFWIRKPRVQRPSDPQ 68
          GS +GA  T   GR   RR  G   P    +++R  +R+PR  RP  P+
Sbjct: 49 GSRRGARDTQDRGRFCVRRQPG---PGT-ARQNRVRMRRPRAPRPRGPR 93


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.320    0.141    0.441 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,170,908
Number of Sequences: 224733
Number of extensions: 550190
Number of successful extensions: 1343
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1334
Number of HSP's gapped (non-prelim): 10
length of query: 69
length of database: 73,234,838
effective HSP length: 48
effective length of query: 21
effective length of database: 62,447,654
effective search space: 1311400734
effective search space used: 1311400734
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)