GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000214-TA|BGIBMGA000214-PA|undefined
         (69 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    21   3.3  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    21   3.3  
AM085517-1|CAJ30215.1|  339|Anopheles gambiae putative angiotens...    21   4.3  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    21   4.3  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    21   5.7  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    21   5.7  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    21   5.7  
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    21   5.7  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    21   5.7  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    21   5.7  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    21   5.7  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    20   7.6  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    20   10.0 

>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)

Query: 53  RFWIRKPRVQRP 64
           R WIR+P ++RP
Sbjct: 154 RPWIRRPWIRRP 165


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 13  DITNLIYGSGKGAPKTGPGGRTPARRS 39
           D+ N   G+  GA   G G   PA+++
Sbjct: 108 DVWNANSGATNGATTGGTGSNVPAQQN 134


>AM085517-1|CAJ30215.1|  339|Anopheles gambiae putative angiotensin
           converting enzymeprecursor protein.
          Length = 339

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 10/20 (50%), Positives = 10/20 (50%)

Query: 29  GPGGRTPARRSQGRIAPDLR 48
           GPG R P  R QG   P  R
Sbjct: 225 GPGQRDPNYRDQGFREPGQR 244


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 5/55 (9%)

Query: 13  DITNLIYGSGKGAPKTGPGGRTPARRS--QGRIAPDLRVQKHRFWIRKPRVQRPS 65
           DI N+   +     K  P  R P RRS   G   P  R    R   R+ R  RP+
Sbjct: 235 DIENIYKNAHASIRKIPPSRRNPRRRSPRSGGRWPSCRSPPAR---RRSRSTRPT 286


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 53  RFWIRKPRVQRPS 65
           R WIR    QRPS
Sbjct: 208 RIWIRLSAYQRPS 220


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
          acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 2/16 (12%)

Query: 46 DLRVQKHRFWIRKPRV 61
          DLR+  HR W  KP V
Sbjct: 80 DLRIPPHRLW--KPDV 93


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 2/16 (12%)

Query: 46  DLRVQKHRFWIRKPRV 61
           DLR+  HR W  KP V
Sbjct: 112 DLRIPPHRIW--KPDV 125


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 9/32 (28%), Positives = 14/32 (43%)

Query: 13  DITNLIYGSGKGAPKTGPGGRTPARRSQGRIA 44
           +   L+  +  G P  G GG +   R+ G  A
Sbjct: 339 EFNELLCRTSAGGPGHGSGGHSNGSRANGGAA 370


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)

Query: 26   PKTGPGGRTPARRSQGRIAPDLRVQKHRFWIRK 58
            PK  PGG +PA  S G    D+      +  R+
Sbjct: 1448 PKDQPGGGSPA-SSSGMAILDMSASPKMYSFRR 1479


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 5/16 (31%), Positives = 10/16 (62%)

Query: 45  PDLRVQKHRFWIRKPR 60
           P+   Q H+ W+ +P+
Sbjct: 207 PEFHFQSHKEWVPQPQ 222


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 5/16 (31%), Positives = 10/16 (62%)

Query: 45  PDLRVQKHRFWIRKPR 60
           P+   Q H+ W+ +P+
Sbjct: 207 PEFHFQSHKEWVPQPQ 222


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/27 (29%), Positives = 15/27 (55%)

Query: 43  IAPDLRVQKHRFWIRKPRVQRPSDPQP 69
           + P LR Q+ +   ++ + QRP   +P
Sbjct: 452 VPPQLRQQRQQQQPQQQQQQRPQQQRP 478


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 10/39 (25%), Positives = 15/39 (38%)

Query: 3   VITIERGNNFDITNLIYGSGKGAPKTGPGGRTPARRSQG 41
           V+     NN    +   G+G G+   G G    +  S G
Sbjct: 389 VVNFASNNNTINKSNFSGAGSGSSSNGAGSSGSSNGSNG 427


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.141    0.441 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,396
Number of Sequences: 2123
Number of extensions: 3415
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of query: 69
length of database: 516,269
effective HSP length: 47
effective length of query: 22
effective length of database: 416,488
effective search space:  9162736
effective search space used:  9162736
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
S2: 39 (19.8 bits)