SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000212-TA|BGIBMGA000212-PA|IPR009041|Proteinase
inhibitor, PMP and SGCI
         (118 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)                   32   0.11 
SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.)                30   0.43 
SB_46360| Best HMM Match : EGF (HMM E-Value=0)                         29   1.3  
SB_6077| Best HMM Match : EGF (HMM E-Value=0)                          29   1.3  
SB_48688| Best HMM Match : Ldl_recept_a (HMM E-Value=7.8e-26)          28   1.7  
SB_30577| Best HMM Match : Ldl_recept_a (HMM E-Value=2.8e-25)          28   1.7  
SB_11608| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   1.7  
SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0)                     28   1.7  
SB_53051| Best HMM Match : rve (HMM E-Value=1.3e-14)                   28   2.3  
SB_48589| Best HMM Match : EGF (HMM E-Value=2e-19)                     28   2.3  
SB_26480| Best HMM Match : EGF (HMM E-Value=0)                         28   2.3  
SB_19034| Best HMM Match : Metallothio (HMM E-Value=9)                 27   3.0  
SB_16910| Best HMM Match : EGF (HMM E-Value=0)                         27   3.0  
SB_45836| Best HMM Match : EGF (HMM E-Value=6.7e-21)                   27   3.0  
SB_35831| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   3.0  
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)                       27   3.0  
SB_1995| Best HMM Match : Acyltransferase (HMM E-Value=0.00021)        27   4.0  
SB_53078| Best HMM Match : Acyltransferase (HMM E-Value=2.8026e-45)    27   4.0  
SB_23591| Best HMM Match : PAN (HMM E-Value=5.9e-07)                   27   5.3  
SB_1493| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   5.3  
SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   7.0  
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   7.0  
SB_14464| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   7.0  
SB_40488| Best HMM Match : HEAT (HMM E-Value=6.3e-08)                  26   9.3  
SB_24840| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   9.3  
SB_23468| Best HMM Match : Peptidase_C14 (HMM E-Value=8.7e-34)         26   9.3  
SB_15242| Best HMM Match : E2F_TDP (HMM E-Value=6e-14)                 26   9.3  

>SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)
          Length = 705

 Score = 32.3 bits (70), Expect = 0.11
 Identities = 12/27 (44%), Positives = 14/27 (51%)

Query: 74  PGEKYMDECDSCRCTDGHSGWCTNQYC 100
           PG+K   +C  C C DG    CT Q C
Sbjct: 250 PGDKVYKDCQLCVCKDGQLTNCTGQKC 276


>SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1081

 Score = 30.3 bits (65), Expect = 0.43
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 28  CEAQDSGACRSMPSCVYCEPTVTALCERSTPCLRCTVIKNPFFKCI-PGEKYMDECDSCR 86
           CE  +S +CR +     CE + +A C R      C + K+   + +   E  + E  SCR
Sbjct: 595 CELSESASCRRVRVVRECELSESASCRRVRVVGECALSKSRRVRVVGESECELSESSSCR 654


>SB_46360| Best HMM Match : EGF (HMM E-Value=0)
          Length = 352

 Score = 28.7 bits (61), Expect = 1.3
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 32  DSGACRSMPSCVYCEPTVTALCERSTPCLRC--TVIKNPFFKCIPGEKYMDECDS--CRC 87
           DS  CR+  SCV  +     LC  S    +C  ++       C+ G   +D  ++  C C
Sbjct: 204 DSKPCRNNGSCVLTQSGYQCLCASSFTSPQCQRSIDDCEHAHCLNGATCVDSDNAYKCSC 263

Query: 88  TDGHSG 93
            +G+ G
Sbjct: 264 LEGYYG 269


>SB_6077| Best HMM Match : EGF (HMM E-Value=0)
          Length = 1165

 Score = 28.7 bits (61), Expect = 1.3
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 32   DSGACRSMPSCVYCEPTVTALCERSTPCLRC--TVIKNPFFKCIPGEKYMDECDS--CRC 87
            DS  CR+  SCV  +     LC  S    +C  ++       C+ G   +D  ++  C C
Sbjct: 1017 DSKPCRNNGSCVLTQSGYQCLCASSFTSPQCQRSIDDCEHAHCLNGATCVDSDNAYKCSC 1076

Query: 88   TDGHSG 93
             +G+ G
Sbjct: 1077 LEGYYG 1082


>SB_48688| Best HMM Match : Ldl_recept_a (HMM E-Value=7.8e-26)
          Length = 351

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 5/51 (9%)

Query: 54  ERSTPCLRCTVIKNPFFKCIPGEKYMD-ECDSCRCTDGHSGWCTNQYCEFR 103
           ER+  C R    K P  KC+   K+ + E D   CTDG   W  +  C  R
Sbjct: 69  ERNCAC-RSAEFKCPDGKCVHPSKFCNGESD---CTDGSDEWSCDNSCSSR 115


>SB_30577| Best HMM Match : Ldl_recept_a (HMM E-Value=2.8e-25)
          Length = 147

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 5/51 (9%)

Query: 54  ERSTPCLRCTVIKNPFFKCIPGEKYMD-ECDSCRCTDGHSGWCTNQYCEFR 103
           ER+  C R    K P  KC+   K+ + E D   CTDG   W  +  C  R
Sbjct: 69  ERNCAC-RSAEFKCPDGKCVHPSKFCNGESD---CTDGSDEWSCDNSCSSR 115


>SB_11608| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 854

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 24/78 (30%), Positives = 28/78 (35%), Gaps = 12/78 (15%)

Query: 24  NCLLCEAQDSGACRSMPSCVYCEPTVTALC------ERSTPCLRCTVIKNP-FFKCIPGE 76
           NCL CE QD   C   P     E T    C          PC  C    +P  +  + G 
Sbjct: 740 NCLPCETQDGIGCFLKPKYCVIEYTGNRTCFSEGTLNPGNPCQVCNSFASPSTWSNLEGA 799

Query: 77  KYMDECDSC----RCTDG 90
              D+ D C    RCT G
Sbjct: 800 P-CDDRDKCTRSDRCTGG 816


>SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0)
          Length = 493

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 12/38 (31%), Positives = 16/38 (42%)

Query: 23  KNCLLCEAQDSGACRSMPSCVYCEPTVTALCERSTPCL 60
           +NC  C + DS       SCVY   + T  C +    L
Sbjct: 415 RNCGYCYSTDSDGSILQGSCVYANTSTTKACRKDITAL 452


>SB_53051| Best HMM Match : rve (HMM E-Value=1.3e-14)
          Length = 1624

 Score = 27.9 bits (59), Expect = 2.3
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 18  LVPENKNCLLCEAQDSGACRSMP-SCVYCEPTVTALCER 55
           L  E+  C LC+ +   ACRS    C  C   + ++C R
Sbjct: 483 LETESCRCTLCDKRGFSACRSGGLRCASCSHAMRSMCTR 521


>SB_48589| Best HMM Match : EGF (HMM E-Value=2e-19)
          Length = 112

 Score = 27.9 bits (59), Expect = 2.3
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 6/47 (12%)

Query: 62  CTVIKNPFFKCIPGEKYMDECDSCRCTDGHSGWCTNQ----YCEFRS 104
           C  +    F  +  E  +DEC+S  C +G  G CTN     +CE R+
Sbjct: 21  CACLCKAGFTGLECESEIDECESSPCLNG--GTCTNHVNYFHCECRA 65


>SB_26480| Best HMM Match : EGF (HMM E-Value=0)
          Length = 1772

 Score = 27.9 bits (59), Expect = 2.3
 Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 26/100 (26%)

Query: 25  CLLCEAQDSGACRSMPSCVYCEPTVTALCERST--------------PC---LRCTVIKN 67
           C  C+A +  +      C  C    T++  RST              PC    +C   K 
Sbjct: 764 CYPCKAGEYSSGERNKKCEQCPKGTTSVSARSTRLEDCGKVNDCASSPCNNNAKCIDTKE 823

Query: 68  PF-FKCIPG------EKYMDECDSCRCTDGHSGWCTNQYC 100
            +  +C+PG      +K +DECD   C    +  C N+YC
Sbjct: 824 SYRCECLPGFQGANCDKEVDECDKQPCFG--AATCVNRYC 861


>SB_19034| Best HMM Match : Metallothio (HMM E-Value=9)
          Length = 228

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 4/69 (5%)

Query: 19  VPENKNCLLCEAQDSGACRSMPSCVYCEPTVTA-LCERSTPCLRCTVIKNPFFKCIPGEK 77
           VP N N  LC +     C +   CV+        LC     C+  T  +  F   +P   
Sbjct: 145 VPLNANVYLCHSMRMCICATQCECVFVPLNANVYLCHSMRMCICATQCECVF---VPLNA 201

Query: 78  YMDECDSCR 86
           Y+  C S R
Sbjct: 202 YVYLCHSMR 210


>SB_16910| Best HMM Match : EGF (HMM E-Value=0)
          Length = 1552

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 20/77 (25%), Positives = 28/77 (36%), Gaps = 4/77 (5%)

Query: 21  ENKNCLLCEAQDSGACRSMPSCVYCEPTVTALCERSTPCLRCTVIKNPFF--KCIPGEKY 78
           E K C L +   S  C++  +C+  E      C        C    N      CI G K 
Sbjct: 429 EGKTCQLSKDCHSQPCQNAGTCINTETGFQCRCAHGWEGPTCDQNTNECAARPCINGRKC 488

Query: 79  MDECD--SCRCTDGHSG 93
           +D     +C C +G  G
Sbjct: 489 IDLIGDYACECLEGWQG 505


>SB_45836| Best HMM Match : EGF (HMM E-Value=6.7e-21)
          Length = 1332

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 6/97 (6%)

Query: 6   PHQYWEEETSLTLVPENKNCLLCEAQDSGACRSMPSCVYCEPTVTALCERSTPCLRCTVI 65
           P   +++   L  + E  N  + +   SG C   P C  C+   T + + +    RC   
Sbjct: 356 PVSCYDDSKPLHFIGETYNVDVLKCNSSGQCPLAPDCARCDHGGTCVDKVNGFSCRCPA- 414

Query: 66  KNPFFKCIPGEKYMDECDSCRCTDGHSGWCTNQYCEF 102
                +C   E  +D+C S  C +G  G C +    F
Sbjct: 415 GYTGRRC---EVDIDDCASQPCQNG--GTCKDGVTSF 446


>SB_35831| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 647

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 25  CLLCEAQDSGACRSMPSCVYCEPTVTA-LCERSTPCLRCTVI 65
           C   E   + A R  P CV C P  TA  C R T  L+C  I
Sbjct: 493 CTYAEGVAAAAKRVTPKCV-CTPEQTATACWRLTHLLQCIAI 533


>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
          Length = 960

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 7/73 (9%)

Query: 28  CEAQDSGACRSMPSCVYCEPTVTALCERSTPCLRCTVIKNPFFKCIPGEKYMDECDSCRC 87
           C+++ +G C  MP   Y  PT    C        CT       +C+ G        SC C
Sbjct: 191 CDSR-TGKCHCMPG--YSGPTCIDECPTGYYGYECT----QKCQCVNGASCDRRTGSCNC 243

Query: 88  TDGHSGWCTNQYC 100
           T G  G    Q C
Sbjct: 244 TVGWIGKFCQQTC 256


>SB_1995| Best HMM Match : Acyltransferase (HMM E-Value=0.00021)
          Length = 127

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 12 EETSLTLVPENKNCLLCEAQDSGACRSMPSCVYCEPTVTALCER 55
          E   L  +PENKNC++     S +    P    C P  T + +R
Sbjct: 42 EAKGLENLPENKNCIIVSNHQS-SLDMFPILRICPPYTTFIAKR 84


>SB_53078| Best HMM Match : Acyltransferase (HMM
          E-Value=2.8026e-45)
          Length = 218

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 12 EETSLTLVPENKNCLLCEAQDSGACRSMPSCVYCEPTVTALCER 55
          E   L  +PENKNC++     S +    P    C P  T + +R
Sbjct: 42 EAKGLENLPENKNCIIVSNHQS-SLDMFPILRICPPYTTFIAKR 84


>SB_23591| Best HMM Match : PAN (HMM E-Value=5.9e-07)
          Length = 336

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 4/45 (8%)

Query: 71  KCIPGEKYMD--ECDSCRCTDGHSGWCTNQYC--EFRSLHLYAMK 111
           +C PG+K     E ++ RC DG +   +N +C  +F   HL   K
Sbjct: 261 RCPPGKKCKANFEAENFRCIDGKNEKYSNHFCNLDFSREHLKEQK 305


>SB_1493| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 741

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)

Query: 3   PKPPHQYWEEETSLTLVPENKNCLLCEAQDSGACRSMPSCVYCEPTVTA 51
           P P +Q     TS+T +    NC   E Q +G C  + +     PT TA
Sbjct: 639 PSPTNQTTTPPTSMTFLVNGTNC-TAEDQANGLCEQISTT--ASPTSTA 684


>SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1530

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)

Query: 75   GEKYMDECDSCRCTDGHSGWCTNQYCE 101
            GE   D C++C C  G    CTN  CE
Sbjct: 1193 GEIRKDRCNNCTCKGGVFD-CTNVDCE 1218


>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6489

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 34   GACRSMPSCVYCEPTVTALCERSTPCLRCTVIKNPFFKCIPG 75
            G+  S  S    + T TA  + ++  +  T +  P FKCIPG
Sbjct: 3733 GSTHSKNSSPVLKATTTADTKSTSEMVSKTPMSMPKFKCIPG 3774


>SB_14464| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 199

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 14 TSLTLVPENKNCLLCEAQDS--GACRSMPSCVYCEPTVT 50
          T+ T  P     L CE ++S  G+C     C +CEP  T
Sbjct: 44 TTATTSPTPTPKLSCEERNSSCGSCTDDYECYWCEPDST 82


>SB_40488| Best HMM Match : HEAT (HMM E-Value=6.3e-08)
          Length = 1185

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 6/29 (20%), Positives = 16/29 (55%)

Query: 45  CEPTVTALCERSTPCLRCTVIKNPFFKCI 73
           C   +++ C     C++ + ++ P+F C+
Sbjct: 743 CASGISSTCSLFLLCIQASAVRAPYFSCV 771


>SB_24840| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 328

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)

Query: 42  CVYCEPTVTALCERSTPCLRC 62
           CV C  +V   C    PCL+C
Sbjct: 227 CVTCRCSVCTCCPCDCPCLQC 247


>SB_23468| Best HMM Match : Peptidase_C14 (HMM E-Value=8.7e-34)
          Length = 212

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 3   PKPPHQYWEEETSLTLVPENKNCLLCEAQD 32
           PKPP ++ E      L P NK     E  D
Sbjct: 101 PKPPEEHQETPYKFDLSPHNKGASTAEMAD 130


>SB_15242| Best HMM Match : E2F_TDP (HMM E-Value=6e-14)
          Length = 273

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 9/13 (69%), Positives = 10/13 (76%)

Query: 6   PHQYWEEETSLTL 18
           PH+YWE  TSL L
Sbjct: 235 PHEYWERVTSLRL 247


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.322    0.136    0.480 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,110,135
Number of Sequences: 59808
Number of extensions: 212111
Number of successful extensions: 497
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 474
Number of HSP's gapped (non-prelim): 46
length of query: 118
length of database: 16,821,457
effective HSP length: 73
effective length of query: 45
effective length of database: 12,455,473
effective search space: 560496285
effective search space used: 560496285
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 54 (25.8 bits)

- SilkBase 1999-2023 -