Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000212-TA|BGIBMGA000212-PA|IPR009041|Proteinase
inhibitor, PMP and SGCI
(118 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067942-9|AAG45572.1| 347|Caenorhabditis elegans Hypothetical ... 35 0.017
AF067942-6|AAG45579.1| 345|Caenorhabditis elegans Hypothetical ... 34 0.023
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 32 0.091
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 32 0.091
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 31 0.21
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 31 0.21
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 31 0.21
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 31 0.21
AF067942-5|AAG45580.2| 345|Caenorhabditis elegans Hypothetical ... 30 0.37
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 30 0.48
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 29 0.64
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 29 0.64
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 29 0.64
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum... 29 0.64
U00036-3|AAT92065.1| 529|Caenorhabditis elegans Dumpy : shorter... 29 0.64
U00036-2|AAK29859.1| 592|Caenorhabditis elegans Dumpy : shorter... 29 0.64
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 29 0.64
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 29 0.64
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 28 1.5
Z75542-4|CAA99861.1| 424|Caenorhabditis elegans Hypothetical pr... 28 1.5
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 28 1.5
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 28 1.5
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 28 1.5
Z83233-1|CAB05760.3| 371|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 27 3.4
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 27 3.4
Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical pr... 27 3.4
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 27 3.4
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr... 27 4.5
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 27 4.5
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 27 4.5
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 27 4.5
Z46937-3|CAA87058.2| 457|Caenorhabditis elegans Hypothetical pr... 26 6.0
U40940-3|AAN39667.1| 455|Caenorhabditis elegans Nuclear hormone... 26 6.0
U40940-2|AAM69090.1| 434|Caenorhabditis elegans Nuclear hormone... 26 6.0
U40940-1|AAM69089.1| 439|Caenorhabditis elegans Nuclear hormone... 26 6.0
AY305839-1|AAR11984.1| 274|Caenorhabditis elegans nuclear recep... 26 6.0
AF273782-1|AAG15131.1| 439|Caenorhabditis elegans nuclear recep... 26 6.0
AF273771-1|AAG15120.1| 454|Caenorhabditis elegans nuclear recep... 26 6.0
AF016447-2|AAG24012.1| 339|Caenorhabditis elegans Hypothetical ... 26 6.0
Z74042-2|CAA98528.2| 379|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 26 7.9
AJ561210-1|CAD99212.1| 151|Caenorhabditis elegans NAS-20 protei... 26 7.9
>AF067942-9|AAG45572.1| 347|Caenorhabditis elegans Hypothetical
protein ZK6.2 protein.
Length = 347
Score = 34.7 bits (76), Expect = 0.017
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 18 LVPENKNCLLCEAQDSGACRSMPSCVYCEPTVTALCERSTPCLRCTVIKNPFFKCIPGEK 77
+V +N+ C +C+ + S+PSC C+ L R+ P +C + +N C
Sbjct: 1 MVTQNQKCSVCDRFTTEFNYSVPSCNACKIFFRRLITRTMPIKKCFLGEN----CFERPP 56
Query: 78 YMDECDSCR 86
+ +C +CR
Sbjct: 57 FTRKCAACR 65
>AF067942-6|AAG45579.1| 345|Caenorhabditis elegans Hypothetical
protein ZK6.4 protein.
Length = 345
Score = 34.3 bits (75), Expect = 0.023
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 18 LVPENKNCLLCEAQDSGACRSMPSCVYCEPTVTALCERSTPCLRCTVIKNPFFK 71
+V N+ C +CE + +PSC C+ L R+TP +C + +N F K
Sbjct: 1 MVATNQKCAVCERFTTEFNYGVPSCNACKIFFRRLITRTTPVKKCYLGENCFTK 54
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 32.3 bits (70), Expect = 0.091
Identities = 20/75 (26%), Positives = 25/75 (33%), Gaps = 1/75 (1%)
Query: 27 LCEAQDSGACRSMPSCVYCEPT-VTALCERSTPCLRCTVIKNPFFKCIPGEKYMDECDSC 85
LC ++ G C S C P + CE + R C G C
Sbjct: 1342 LCSCENGGVCDSSTGSCVCPPGYIGTKCEIACQSDRFGPTCEKICNCENGGTCDRLTGQC 1401
Query: 86 RCTDGHSGWCTNQYC 100
RC G +G NQ C
Sbjct: 1402 RCLPGFTGMTCNQVC 1416
Score = 28.3 bits (60), Expect = 1.5
Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Query: 33 SGACRSMPSCVYCEPTVTA-LCERSTPCLRCTVIKNPFF--KCIPGEKYMDECDSCRCTD 89
S C + C P T LC++S C T N C+ G K + SC CT
Sbjct: 822 SKVCHHVTGTCTCLPGKTGPLCDQS--CAPNTYGPNCAHTCSCVNGAKCDESDGSCHCTP 879
Query: 90 GHSGWCTNQYCEFRSLHLYAMKL 112
G G ++ C + M+L
Sbjct: 880 GFYGATCSEVCPTGRFGIDCMQL 902
Score = 26.2 bits (55), Expect = 6.0
Identities = 20/79 (25%), Positives = 25/79 (31%), Gaps = 2/79 (2%)
Query: 24 NCL-LCEAQDSGACRSMPSCVYCEPTVT-ALCERSTPCLRCTVIKNPFFKCIPGEKYMDE 81
NC C + C +C P A C P R + KC G
Sbjct: 855 NCAHTCSCVNGAKCDESDGSCHCTPGFYGATCSEVCPTGRFGIDCMQLCKCQNGAICDTS 914
Query: 82 CDSCRCTDGHSGWCTNQYC 100
SC C G SG ++ C
Sbjct: 915 NGSCECAPGWSGKKCDKAC 933
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 32.3 bits (70), Expect = 0.091
Identities = 20/75 (26%), Positives = 25/75 (33%), Gaps = 1/75 (1%)
Query: 27 LCEAQDSGACRSMPSCVYCEPT-VTALCERSTPCLRCTVIKNPFFKCIPGEKYMDECDSC 85
LC ++ G C S C P + CE + R C G C
Sbjct: 1342 LCSCENGGVCDSSTGSCVCPPGYIGTKCEIACQSDRFGPTCEKICNCENGGTCDRLTGQC 1401
Query: 86 RCTDGHSGWCTNQYC 100
RC G +G NQ C
Sbjct: 1402 RCLPGFTGMTCNQVC 1416
Score = 28.3 bits (60), Expect = 1.5
Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Query: 33 SGACRSMPSCVYCEPTVTA-LCERSTPCLRCTVIKNPFF--KCIPGEKYMDECDSCRCTD 89
S C + C P T LC++S C T N C+ G K + SC CT
Sbjct: 822 SKVCHHVTGTCTCLPGKTGPLCDQS--CAPNTYGPNCAHTCSCVNGAKCDESDGSCHCTP 879
Query: 90 GHSGWCTNQYCEFRSLHLYAMKL 112
G G ++ C + M+L
Sbjct: 880 GFYGATCSEVCPTGRFGIDCMQL 902
Score = 26.2 bits (55), Expect = 6.0
Identities = 20/79 (25%), Positives = 25/79 (31%), Gaps = 2/79 (2%)
Query: 24 NCL-LCEAQDSGACRSMPSCVYCEPTVT-ALCERSTPCLRCTVIKNPFFKCIPGEKYMDE 81
NC C + C +C P A C P R + KC G
Sbjct: 855 NCAHTCSCVNGAKCDESDGSCHCTPGFYGATCSEVCPTGRFGIDCMQLCKCQNGAICDTS 914
Query: 82 CDSCRCTDGHSGWCTNQYC 100
SC C G SG ++ C
Sbjct: 915 NGSCECAPGWSGKKCDKAC 933
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 31.1 bits (67), Expect = 0.21
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Query: 25 CLLCEAQDSGACRSMPSCVYCE--PTVTA-LCERSTPCLRCTVIKNPFFKCIPGE-KYMD 80
C Q+ G CRS YCE P T LCE + I P +C G+ + D
Sbjct: 261 CSSVPCQNGGVCRSNNGIAYCECPPAFTGLLCESAHTDESVAPICRP--ECSNGQCVFKD 318
Query: 81 ECDSCRCTDGHSG 93
C C G +G
Sbjct: 319 GQAQCECRQGFTG 331
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 31.1 bits (67), Expect = 0.21
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Query: 25 CLLCEAQDSGACRSMPSCVYCE--PTVTA-LCERSTPCLRCTVIKNPFFKCIPGE-KYMD 80
C Q+ G CRS YCE P T LCE + I P +C G+ + D
Sbjct: 261 CSSVPCQNGGVCRSNNGIAYCECPPAFTGLLCESAHTDESVAPICRP--ECSNGQCVFKD 318
Query: 81 ECDSCRCTDGHSG 93
C C G +G
Sbjct: 319 GQAQCECRQGFTG 331
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 31.1 bits (67), Expect = 0.21
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Query: 25 CLLCEAQDSGACRSMPSCVYCE--PTVTA-LCERSTPCLRCTVIKNPFFKCIPGE-KYMD 80
C Q+ G CRS YCE P T LCE + I P +C G+ + D
Sbjct: 261 CSSVPCQNGGVCRSNNGIAYCECPPAFTGLLCESAHTDESVAPICRP--ECSNGQCVFKD 318
Query: 81 ECDSCRCTDGHSG 93
C C G +G
Sbjct: 319 GQAQCECRQGFTG 331
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 31.1 bits (67), Expect = 0.21
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Query: 25 CLLCEAQDSGACRSMPSCVYCE--PTVTA-LCERSTPCLRCTVIKNPFFKCIPGE-KYMD 80
C Q+ G CRS YCE P T LCE + I P +C G+ + D
Sbjct: 261 CSSVPCQNGGVCRSNNGIAYCECPPAFTGLLCESAHTDESVAPICRP--ECSNGQCVFKD 318
Query: 81 ECDSCRCTDGHSG 93
C C G +G
Sbjct: 319 GQAQCECRQGFTG 331
>AF067942-5|AAG45580.2| 345|Caenorhabditis elegans Hypothetical
protein ZK6.5 protein.
Length = 345
Score = 30.3 bits (65), Expect = 0.37
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 18 LVPENKNCLLCEAQDSGACRSMPSCVYCEPTVTALCERSTPCLRCTVIKNPFFKCIPGEK 77
++ N+ C +CE + +PSC C+ L R+ P +C + ++ F K P K
Sbjct: 1 MLASNQTCAVCERFTTEFNYGVPSCNACKIFFRRLITRTAPVKQCYIGEHCFTKS-PITK 59
Query: 78 YMDECDSCR 86
+C CR
Sbjct: 60 ---KCTFCR 65
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 29.9 bits (64), Expect = 0.48
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Query: 52 LCERSTPCLRCTVIKNPFFKCIP-----GEKYMDECDSCRC 87
+C+ T C C+V N F +C G+K + E D+ +C
Sbjct: 1122 MCDNKTHCTNCSVCVNGFCRCPEGLVHYGDKCVSEIDATKC 1162
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 29.5 bits (63), Expect = 0.64
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Query: 20 PENKNCLLCEAQDSGA-CRSMPSCVYCEPTVTALCERSTPCLRC--TVIKNPFFKCIPGE 76
P + +C LCE G C S + Y + C S C +C N C
Sbjct: 1953 PNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCS-SCECSQCGSQYCDNKSGGC--EC 2009
Query: 77 KYMDECDSC-RCTDGHSGWCTNQYCE 101
K E DSC RC H G+ Q C+
Sbjct: 2010 KINVEGDSCDRCKPDHWGFSKCQGCQ 2035
Score = 25.8 bits (54), Expect = 7.9
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 9/82 (10%)
Query: 23 KNCLLCEAQDSGACRSMPSCVYCEPTVTALCERSTPCLRCTVIKNPFFKCIPGEKYMDEC 82
++C C+ + SC + LCE++T C F+ K C
Sbjct: 1932 ESCSPCQCNGNNNLTDSRSC-HPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAK---NC 1987
Query: 83 DSCRCTDGHSGWCTNQYCEFRS 104
SC C+ C +QYC+ +S
Sbjct: 1988 SSCECSQ-----CGSQYCDNKS 2004
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 29.5 bits (63), Expect = 0.64
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Query: 20 PENKNCLLCEAQDSGA-CRSMPSCVYCEPTVTALCERSTPCLRC--TVIKNPFFKCIPGE 76
P + +C LCE G C S + Y + C S C +C N C
Sbjct: 1953 PNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCS-SCECSQCGSQYCDNKSGGC--EC 2009
Query: 77 KYMDECDSC-RCTDGHSGWCTNQYCE 101
K E DSC RC H G+ Q C+
Sbjct: 2010 KINVEGDSCDRCKPDHWGFSKCQGCQ 2035
Score = 25.8 bits (54), Expect = 7.9
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 9/82 (10%)
Query: 23 KNCLLCEAQDSGACRSMPSCVYCEPTVTALCERSTPCLRCTVIKNPFFKCIPGEKYMDEC 82
++C C+ + SC + LCE++T C F+ K C
Sbjct: 1932 ESCSPCQCNGNNNLTDSRSC-HPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAK---NC 1987
Query: 83 DSCRCTDGHSGWCTNQYCEFRS 104
SC C+ C +QYC+ +S
Sbjct: 1988 SSCECSQ-----CGSQYCDNKS 2004
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 29.5 bits (63), Expect = 0.64
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 18 LVPENKNCLLCEAQDSGACRSMPSCVY-CEPTVTALCERSTPCLRCTVIKNPFFKCIPGE 76
L+P+ NC C+ Q +C + P C C ++ C S P + V++ +C +
Sbjct: 98 LLPQTNNCNQCQQQCISSC-ATPICAQSCNNQCSSSCGNSAP--QIVVLQPQQNQCGSCQ 154
Query: 77 KYMDE-CDSCRCTDGHSGWC 95
+ C +C C + C
Sbjct: 155 SSCQQTCPTCNCQSACAPAC 174
>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
homolog protein 1 protein.
Length = 1722
Score = 29.5 bits (63), Expect = 0.64
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Query: 43 VYCEPTVTALCERSTPCLRCTVIKNPFFKCIPGEKYMDECDSCRCTDGHSGWCTNQYCEF 102
++C ALC R+ C R T + N + E M +C+ C G SG C
Sbjct: 8 IFCTLVTNALCNRA--CSRNTCL-NGGTCTVNDETRMFQCE---CPKGFSGLLCQDNCSL 61
Query: 103 RSLHLYAMKLSDGE 116
LH +K + GE
Sbjct: 62 HCLHGNCVKGTFGE 75
>U00036-3|AAT92065.1| 529|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 31, isoform b protein.
Length = 529
Score = 29.5 bits (63), Expect = 0.64
Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 4/20 (20%)
Query: 82 CDSCRCTDGHSGWCTNQYCE 101
CD CRC DG +G QYCE
Sbjct: 346 CDRCRCPDGFTG----QYCE 361
>U00036-2|AAK29859.1| 592|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 31, isoform a protein.
Length = 592
Score = 29.5 bits (63), Expect = 0.64
Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 4/20 (20%)
Query: 82 CDSCRCTDGHSGWCTNQYCE 101
CD CRC DG +G QYCE
Sbjct: 346 CDRCRCPDGFTG----QYCE 361
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 29.5 bits (63), Expect = 0.64
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Query: 20 PENKNCLLCEAQDSGA-CRSMPSCVYCEPTVTALCERSTPCLRC--TVIKNPFFKCIPGE 76
P + +C LCE G C S + Y + C S C +C N C
Sbjct: 1953 PNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCS-SCECSQCGSQYCDNKSGGC--EC 2009
Query: 77 KYMDECDSC-RCTDGHSGWCTNQYCE 101
K E DSC RC H G+ Q C+
Sbjct: 2010 KINVEGDSCDRCKPDHWGFSKCQGCQ 2035
Score = 25.8 bits (54), Expect = 7.9
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 9/82 (10%)
Query: 23 KNCLLCEAQDSGACRSMPSCVYCEPTVTALCERSTPCLRCTVIKNPFFKCIPGEKYMDEC 82
++C C+ + SC + LCE++T C F+ K C
Sbjct: 1932 ESCSPCQCNGNNNLTDSRSC-HPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAK---NC 1987
Query: 83 DSCRCTDGHSGWCTNQYCEFRS 104
SC C+ C +QYC+ +S
Sbjct: 1988 SSCECSQ-----CGSQYCDNKS 2004
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 29.5 bits (63), Expect = 0.64
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Query: 20 PENKNCLLCEAQDSGA-CRSMPSCVYCEPTVTALCERSTPCLRC--TVIKNPFFKCIPGE 76
P + +C LCE G C S + Y + C S C +C N C
Sbjct: 1953 PNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCS-SCECSQCGSQYCDNKSGGC--EC 2009
Query: 77 KYMDECDSC-RCTDGHSGWCTNQYCE 101
K E DSC RC H G+ Q C+
Sbjct: 2010 KINVEGDSCDRCKPDHWGFSKCQGCQ 2035
Score = 25.8 bits (54), Expect = 7.9
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 9/82 (10%)
Query: 23 KNCLLCEAQDSGACRSMPSCVYCEPTVTALCERSTPCLRCTVIKNPFFKCIPGEKYMDEC 82
++C C+ + SC + LCE++T C F+ K C
Sbjct: 1932 ESCSPCQCNGNNNLTDSRSC-HPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAK---NC 1987
Query: 83 DSCRCTDGHSGWCTNQYCEFRS 104
SC C+ C +QYC+ +S
Sbjct: 1988 SSCECSQ-----CGSQYCDNKS 2004
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 4/58 (6%)
Query: 34 GACRSMPSCVYC-EPTVTALCERSTPCLRCTVIKNPFFKCIPGEKYMDECDSCRCTDG 90
G C P C C P C R+ C RC P C G C C C G
Sbjct: 65 GCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRP---CCCGCGCGCGCGCCGCGGG 119
>Z75542-4|CAA99861.1| 424|Caenorhabditis elegans Hypothetical
protein F55D12.4 protein.
Length = 424
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
Query: 20 PENKNCLLCEAQDSGACRSMPSCVYCEPTVTALCERSTPCLRCTVIKNPFFKCIPGEKYM 79
P+ +C++C + SG SC C+ RS C KN C ++
Sbjct: 49 PDATDCVVCGDKSSGKHYGQFSCEGCKSFFKRSIRRSL-SYTCRATKN----CAIDVQHR 103
Query: 80 DECDSCRCT 88
++C CR T
Sbjct: 104 NQCQYCRLT 112
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Query: 22 NKNCLLCEAQDSGACRSMPSCVYCEPTVTALCERSTPCLRCTVIKNPFFKCIPGE 76
N C +SG CR P + AL +TP +R VI P C GE
Sbjct: 843 NTVCTKGSTCESGLCRCQPGYIAVSGNCVALPMSTTPKMR--VIAKPLESCENGE 895
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Query: 22 NKNCLLCEAQDSGACRSMPSCVYCEPTVTALCERSTPCLRCTVIKNPFFKCIPGE 76
N C +SG CR P + AL +TP +R VI P C GE
Sbjct: 940 NTVCTKGSTCESGLCRCQPGYIAVSGNCVALPMSTTPKMR--VIAKPLESCENGE 992
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 28.3 bits (60), Expect = 1.5
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 13/88 (14%)
Query: 2 KPKPPHQYWEEETSLTLVPENKNCLLCEAQDSGACRSMPSCVYCEPTVTALCERSTPCLR 61
KP+P + T+ T P+ + + ++ C S C + ALCER T R
Sbjct: 1384 KPEPTKDTFALPTTTTGAPQAND----SSVENTKCTSSDEC-----GLDALCERRTGVCR 1434
Query: 62 CTVIKNPFFKCIPGEKYMDECDSCRCTD 89
C P F+ P +K + D C D
Sbjct: 1435 C----EPGFEGAPPKKSCVDVDECATGD 1458
>Z83233-1|CAB05760.3| 371|Caenorhabditis elegans Hypothetical
protein K06B4.1 protein.
Length = 371
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 22 NKNCLLCEAQDSGACRSMPSCVYCE 46
NKNCL+C + +G + SC C+
Sbjct: 2 NKNCLICHRKAAGQHYGVLSCFACK 26
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.1 bits (57), Expect = 3.4
Identities = 21/79 (26%), Positives = 28/79 (35%), Gaps = 8/79 (10%)
Query: 21 ENKNCLLCEAQDSGACRSMPSCVYCEPTVTAL-------CERSTPCLRCTVIKNPFFKCI 73
+ K LL A + CVY PT T + + PC+ CT +
Sbjct: 704 DKKWVLLSSTSPLAASVTSLGCVYANPTTTTKRPTTIPGIDPNNPCMNCTNLVVSQSIHP 763
Query: 74 PGEKYMDE-CDSCRCTDGH 91
G Y+D D C D H
Sbjct: 764 EGVTYLDHTLDKCLSVDAH 782
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.1 bits (57), Expect = 3.4
Identities = 21/79 (26%), Positives = 28/79 (35%), Gaps = 8/79 (10%)
Query: 21 ENKNCLLCEAQDSGACRSMPSCVYCEPTVTAL-------CERSTPCLRCTVIKNPFFKCI 73
+ K LL A + CVY PT T + + PC+ CT +
Sbjct: 704 DKKWVLLSSTSPLAASVTSLGCVYANPTTTTKRPTTIPGIDPNNPCMNCTNLVVSQSIHP 763
Query: 74 PGEKYMDE-CDSCRCTDGH 91
G Y+D D C D H
Sbjct: 764 EGVTYLDHTLDKCLSVDAH 782
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.1 bits (57), Expect = 3.4
Identities = 21/79 (26%), Positives = 28/79 (35%), Gaps = 8/79 (10%)
Query: 21 ENKNCLLCEAQDSGACRSMPSCVYCEPTVTAL-------CERSTPCLRCTVIKNPFFKCI 73
+ K LL A + CVY PT T + + PC+ CT +
Sbjct: 704 DKKWVLLSSTSPLAASVTSLGCVYANPTTTTKRPTTIPGIDPNNPCMNCTNLVVSQSIHP 763
Query: 74 PGEKYMDE-CDSCRCTDGH 91
G Y+D D C D H
Sbjct: 764 EGVTYLDHTLDKCLSVDAH 782
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.1 bits (57), Expect = 3.4
Identities = 21/79 (26%), Positives = 28/79 (35%), Gaps = 8/79 (10%)
Query: 21 ENKNCLLCEAQDSGACRSMPSCVYCEPTVTAL-------CERSTPCLRCTVIKNPFFKCI 73
+ K LL A + CVY PT T + + PC+ CT +
Sbjct: 704 DKKWVLLSSTSPLAASVTSLGCVYANPTTTTKRPTTIPGIDPNNPCMNCTNLVVSQSIHP 763
Query: 74 PGEKYMDE-CDSCRCTDGH 91
G Y+D D C D H
Sbjct: 764 EGVTYLDHTLDKCLSVDAH 782
>Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical
protein F10F2.2 protein.
Length = 1343
Score = 27.1 bits (57), Expect = 3.4
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 50 TALCERSTPCLRCTVIKNPFFKCIPGEKYM 79
T + PC T + NP K +PG K +
Sbjct: 816 TLVLSAYAPCTNVTKVVNPSLKAVPGSKIL 845
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily assigned
gene nameprotein 162 protein.
Length = 2643
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 68 PFFKCIPGEKYMDECDSCRCTDGHSGWCT 96
P FKCI + D + C D WCT
Sbjct: 1238 PNFKCISDKHLCDGTNDCEEGDDEGLWCT 1266
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 56 STPCLRCTVIKNPFFKCIPGEKYMD---ECDSCRCTD 89
+T C ++N F +C+ G+K D EC +CR T+
Sbjct: 2662 NTDCKMEIDLENVFDECLMGKKKDDEHCECSACRLTE 2698
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 26.6 bits (56), Expect = 4.5
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 31 QDSGACRSMPSCVYCEPTVTALCERSTPCLRCTVIKNPFFKCIPGEKYMDECDSCRCTDG 90
+ S CRS C+P + C S CL + N F C P + + DE S +
Sbjct: 3990 ETSSECRS----AQCDPPLRFRCAHSRLCLNILQLCNGFNDCGPND-FSDEHLSMCSSFS 4044
Query: 91 HSGWCTN 97
G C++
Sbjct: 4045 EYGDCSS 4051
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 53 CERSTPCLRCTVIKNPFFKCIPGEKYMDECDSCRCTDGHSGWCTNQYCEFR 103
C T C++ + + + C G D C+ +CT + C N+ C+ R
Sbjct: 189 CADKTQCIQKSWVCDGSKDCADGSDEPDTCEFKKCT-ANEFQCKNKRCQPR 238
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Query: 71 KCIPGEKYMDECDSCRCTDG-HSGWCTNQYC 100
KCIPG K D + +C+DG CT + C
Sbjct: 3889 KCIPGSKVCD--GTIQCSDGLDESQCTLRRC 3917
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 56 STPCLRCTVIKNPFFKCIPGEKYMD---ECDSCRCTD 89
+T C ++N F +C+ G+K D EC +CR T+
Sbjct: 2662 NTDCKMEIDLENVFDECLMGKKKDDEHCECSACRLTE 2698
>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical protein
K09C8.5 protein.
Length = 1328
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Query: 80 DECDSCRCTDGHSGWC-TNQYCE 101
D C C C DG WC TN +C+
Sbjct: 1304 DICVECMCHDGEV-WCKTNNFCK 1325
>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical protein
K09C8.5 protein.
Length = 1328
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Query: 80 DECDSCRCTDGHSGWC-TNQYCE 101
D C C C DG WC TN +C+
Sbjct: 1304 DICVECMCHDGEV-WCKTNNFCK 1325
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 26.6 bits (56), Expect = 4.5
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Query: 33 SGACRSMPSCVYCEPTVTALCERSTPCLRCTVIKNPFFKCIPGEKYMDECDSCRCTDGHS 92
+G C + CV A T C +C P C+ G+ + ++C+C DG
Sbjct: 178 AGGCSNRGRCVAPNQCSCADGFNGTRCEQCL----PRAGCVNGDCVNETPNTCKCRDGFI 233
Query: 93 G 93
G
Sbjct: 234 G 234
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 26.6 bits (56), Expect = 4.5
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 31 QDSGACRSMPSCVYCEPTVTALCERSTPCLRCTVIKNPFFKCIPGEKYMDECDSCRCTDG 90
+ S CRS C+P + C S CL + N F C P + + DE S +
Sbjct: 3990 ETSSECRS----AQCDPPLRFRCAHSRLCLNILQLCNGFNDCGPND-FSDEHLSMCSSFS 4044
Query: 91 HSGWCTN 97
G C++
Sbjct: 4045 EYGDCSS 4051
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 53 CERSTPCLRCTVIKNPFFKCIPGEKYMDECDSCRCTDGHSGWCTNQYCEFR 103
C T C++ + + + C G D C+ +CT + C N+ C+ R
Sbjct: 189 CADKTQCIQKSWVCDGSKDCADGSDEPDTCEFKKCT-ANEFQCKNKRCQPR 238
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Query: 71 KCIPGEKYMDECDSCRCTDG-HSGWCTNQYC 100
KCIPG K D + +C+DG CT + C
Sbjct: 3889 KCIPGSKVCD--GTIQCSDGLDESQCTLRRC 3917
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 26.6 bits (56), Expect = 4.5
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Query: 33 SGACRSMPSCVYCEPTVTALCERSTPCLRCTVIKNPFFKCIPGEKYMDECDSCRCTDGHS 92
+G C + CV A T C +C P C+ G+ + ++C+C DG
Sbjct: 178 AGGCSNRGRCVAPNQCSCADGFNGTRCEQCL----PRAGCVNGDCVNETPNTCKCRDGFI 233
Query: 93 G 93
G
Sbjct: 234 G 234
>Z46937-3|CAA87058.2| 457|Caenorhabditis elegans Hypothetical
protein F43C1.4 protein.
Length = 457
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Query: 19 VPENKNCLLCEAQDSGACR-SMPSCVYC 45
+P CL+CE D G+ SC+ C
Sbjct: 13 IPPTSKCLVCEHPDGGSAHFGSTSCLAC 40
>U40940-3|AAN39667.1| 455|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 40, isoform c protein.
Length = 455
Score = 26.2 bits (55), Expect = 6.0
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Query: 19 VPENKNCLLCEAQDSGACRSMPSCVYCEPTV-TALCERSTPCLRCTVIKNPFFKCIPGEK 77
+PE C++C SG S+ SC C+ AL + T C + C+ G+
Sbjct: 25 IPEGTLCVVCSDFASGIHYSVASCNGCKTFFRRALVNKQT--FTCQFSGD----CVVGKS 78
Query: 78 YMDECDSCR 86
C SCR
Sbjct: 79 VRCVCRSCR 87
>U40940-2|AAM69090.1| 434|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 40, isoform b protein.
Length = 434
Score = 26.2 bits (55), Expect = 6.0
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Query: 19 VPENKNCLLCEAQDSGACRSMPSCVYCEPTV-TALCERSTPCLRCTVIKNPFFKCIPGEK 77
+PE C++C SG S+ SC C+ AL + T C + C+ G+
Sbjct: 9 IPEGTLCVVCSDFASGIHYSVASCNGCKTFFRRALVNKQT--FTCQFSGD----CVVGKS 62
Query: 78 YMDECDSCR 86
C SCR
Sbjct: 63 VRCVCRSCR 71
>U40940-1|AAM69089.1| 439|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 40, isoform a protein.
Length = 439
Score = 26.2 bits (55), Expect = 6.0
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Query: 19 VPENKNCLLCEAQDSGACRSMPSCVYCEPTV-TALCERSTPCLRCTVIKNPFFKCIPGEK 77
+PE C++C SG S+ SC C+ AL + T C + C+ G+
Sbjct: 9 IPEGTLCVVCSDFASGIHYSVASCNGCKTFFRRALVNKQT--FTCQFSGD----CVVGKS 62
Query: 78 YMDECDSCR 86
C SCR
Sbjct: 63 VRCVCRSCR 71
>AY305839-1|AAR11984.1| 274|Caenorhabditis elegans nuclear
receptor NHR-20 protein.
Length = 274
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Query: 19 VPENKNCLLCEAQDSGACR-SMPSCVYC 45
+P CL+CE D G+ SC+ C
Sbjct: 13 IPPTSKCLVCEHPDGGSAHFGSTSCLAC 40
>AF273782-1|AAG15131.1| 439|Caenorhabditis elegans nuclear
receptor NHR-40 protein.
Length = 439
Score = 26.2 bits (55), Expect = 6.0
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Query: 19 VPENKNCLLCEAQDSGACRSMPSCVYCEPTV-TALCERSTPCLRCTVIKNPFFKCIPGEK 77
+PE C++C SG S+ SC C+ AL + T C + C+ G+
Sbjct: 9 IPEGTLCVVCSDFASGIHYSVASCNGCKTFFRRALVNKQT--FTCQFSGD----CVVGKS 62
Query: 78 YMDECDSCR 86
C SCR
Sbjct: 63 VRCVCRSCR 71
>AF273771-1|AAG15120.1| 454|Caenorhabditis elegans nuclear
receptor NHR-20 protein.
Length = 454
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Query: 19 VPENKNCLLCEAQDSGACR-SMPSCVYC 45
+P CL+CE D G+ SC+ C
Sbjct: 10 IPPTSKCLVCEHPDGGSAHFGSTSCLAC 37
>AF016447-2|AAG24012.1| 339|Caenorhabditis elegans Hypothetical
protein C54F6.9 protein.
Length = 339
Score = 26.2 bits (55), Expect = 6.0
Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 7/63 (11%)
Query: 50 TALCERSTPCLRCTVIKNPFFKCIPGEKYMDECDSCRCTDGHSGWCTNQYCEFRSLHLYA 109
T CE R +++NPFF C K ++ C H C C F+
Sbjct: 21 TVSCEACKMFFRRAIVENPFFNC----KKLNNCYEVSTNSNHLK-CA--ACRFKRCLQLG 73
Query: 110 MKL 112
MKL
Sbjct: 74 MKL 76
>Z74042-2|CAA98528.2| 379|Caenorhabditis elegans Hypothetical
protein T11F9.3 protein.
Length = 379
Score = 25.8 bits (54), Expect = 7.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 82 CDSCRCTDGHSGWCTNQY 99
C+ C CTDG +G +Q+
Sbjct: 229 CEECLCTDGFNGQLCDQH 246
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/36 (33%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 34 GACRSMPSCVYC-EPTVTALCERSTPCLRCTVIKNP 68
G C P C C P C R+ C RC P
Sbjct: 67 GCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRP 102
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/36 (33%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 34 GACRSMPSCVYC-EPTVTALCERSTPCLRCTVIKNP 68
G C P C C P C R+ C RC P
Sbjct: 70 GCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRP 105
>AJ561210-1|CAD99212.1| 151|Caenorhabditis elegans NAS-20 protein
protein.
Length = 151
Score = 25.8 bits (54), Expect = 7.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 82 CDSCRCTDGHSGWCTNQY 99
C+ C CTDG +G +Q+
Sbjct: 72 CEECLCTDGFNGQLCDQH 89
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.136 0.480
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,733,752
Number of Sequences: 27539
Number of extensions: 161800
Number of successful extensions: 467
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 427
Number of HSP's gapped (non-prelim): 79
length of query: 118
length of database: 12,573,161
effective HSP length: 73
effective length of query: 45
effective length of database: 10,562,814
effective search space: 475326630
effective search space used: 475326630
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 54 (25.8 bits)
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