GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000212-TA|BGIBMGA000212-PA|IPR009041|Proteinase
inhibitor, PMP and SGCI
         (118 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   0.53 
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   2.8  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   2.8  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   3.8  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 0.53
 Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 2/52 (3%)

Query: 51  ALCERS--TPCLRCTVIKNPFFKCIPGEKYMDECDSCRCTDGHSGWCTNQYC 100
           AL E++  T      VI+ P F C    K+      C C  G+      Q C
Sbjct: 211 ALIEQTIGTCVANAVVIEQPTFLCKGDGKWYLPSGGCHCKPGYQADVEKQEC 262


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
          protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 8/21 (38%), Positives = 10/21 (47%)

Query: 2  KPKPPHQYWEEETSLTLVPEN 22
          +P+PPH     E  L   P N
Sbjct: 79 QPRPPHPRLRREAELEAEPGN 99



 Score = 21.4 bits (43), Expect = 2.8
 Identities = 8/21 (38%), Positives = 10/21 (47%)

Query: 2   KPKPPHQYWEEETSLTLVPEN 22
           +P+PPH     E  L   P N
Sbjct: 135 QPRPPHPRLRREAELEAEPGN 155


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 7/25 (28%), Positives = 12/25 (48%)

Query: 58  PCLRCTVIKNPFFKCIPGEKYMDEC 82
           P   C V  +    C+P  K++ +C
Sbjct: 145 PPTTCLVFSSGSVSCVPSVKHVAKC 169


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 7/26 (26%), Positives = 11/26 (42%)

Query: 58  PCLRCTVIKNPFFKCIPGEKYMDECD 83
           P + C V  +    C+P   Y   C+
Sbjct: 135 PSVECIVFNSGTILCVPFTTYTPVCE 160


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.136    0.480 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,527
Number of Sequences: 429
Number of extensions: 1659
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 118
length of database: 140,377
effective HSP length: 51
effective length of query: 67
effective length of database: 118,498
effective search space:  7939366
effective search space used:  7939366
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.0 bits)
S2: 39 (19.8 bits)