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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000211-TA|BGIBMGA000211-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like
         (124 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY038071-1|AAK93901.1|  562|Homo sapiens aristaless-related home...    86   3e-17
U12259-1|AAA80574.1|  283|Homo sapiens paired box homeotic prote...    78   7e-15
U02368-1|AAC50053.1|  836|Homo sapiens PAX3 protein-forkhead tra...    78   7e-15
BC114363-1|AAI14364.1|  483|Homo sapiens paired box gene 3 (Waar...    78   7e-15
BC101302-1|AAI01303.1|  483|Homo sapiens paired box gene 3 (Waar...    78   7e-15
BC101301-1|AAI01302.1|  484|Homo sapiens paired box gene 3 (Waar...    78   7e-15
BC101300-1|AAI01301.1|  483|Homo sapiens paired box gene 3 (Waar...    78   7e-15
BC101299-1|AAI01300.1|  483|Homo sapiens paired box gene 3 (Waar...    78   7e-15
AY633656-1|AAT47737.1|  850|Homo sapiens PAX3/NCOA1 fusion prote...    78   7e-15
AY251280-1|AAP13873.1|  407|Homo sapiens paired box 3 splice var...    78   7e-15
AY251279-1|AAP13872.1|  403|Homo sapiens paired box 3 splice var...    78   7e-15
AF115392-1|AAD23438.1|  346|Homo sapiens retinal homeobox protei...    78   7e-15
Z35141-1|CAA84513.1|  467|Homo sapiens PAX7 paired box containin...    77   2e-14
X96744-2|CAA65522.1|  520|Homo sapiens PAX7 protein.                   77   2e-14
X96744-1|CAA65521.1|  518|Homo sapiens PAX7 protein.                   77   2e-14
X96743-1|CAA65520.1|  520|Homo sapiens paired box containing tra...    77   2e-14
DQ322591-1|ABC48797.1|  505|Homo sapiens PAX7 transcriptional fa...    77   2e-14
BC121166-1|AAI21167.1|  518|Homo sapiens paired box gene 7 protein.    77   2e-14
BC121165-1|AAI21166.1|  518|Homo sapiens paired box gene 7 protein.    77   2e-14
AL021528-1|CAA16432.1|  520|Homo sapiens paired box gene 7 protein.    77   2e-14
AJ404888-1|CAC15060.1|  411|Homo sapiens homeodomain transcripti...    76   3e-14
AJ279074-1|CAC15120.1|  411|Homo sapiens homeodomain transcripti...    76   3e-14
AF308825-1|AAK38835.1|  411|Homo sapiens aristaless-like homeobo...    76   3e-14
AF294629-1|AAG23961.1|  410|Homo sapiens aristaless-like 4 protein.    76   3e-14
AB058691-1|BAB47417.1|  413|Homo sapiens KIAA1788 protein protein.     76   3e-14
BC032512-1|AAH32512.1|  184|Homo sapiens retina and anterior neu...    75   5e-14
BC018709-1|AAH18709.1|  184|Homo sapiens retina and anterior neu...    75   5e-14
BC007284-1|AAH07284.1|  184|Homo sapiens RAXL1 protein protein.        75   5e-14
AY211277-1|AAP41547.1|  184|Homo sapiens Q50-type retinal homeob...    75   5e-14
D82344-1|BAA11555.1|  314|Homo sapiens NBPhox protein.                 73   2e-13
BC113428-1|AAI13429.1|  343|Homo sapiens aristaless-like homeobo...    73   2e-13
BC112007-1|AAI12008.1|  343|Homo sapiens ALX3 protein protein.         73   2e-13
BC041564-1|AAH41564.1|  284|Homo sapiens paired-like (aristaless...    73   2e-13
BC017199-1|AAH17199.1|  314|Homo sapiens paired-like homeobox 2b...    73   2e-13
AL160006-1|CAI22714.1|  343|Homo sapiens aristaless-like homeobo...    73   2e-13
AF117979-1|AAD26698.1|  314|Homo sapiens homeodomain transcripti...    73   2e-13
AF022724-1|AAB82744.1|  284|Homo sapiens ARIX homeodomain protei...    73   2e-13
AF008203-1|AAD01418.1|  343|Homo sapiens homeobox protein protein.     73   2e-13
AB015671-1|BAA82670.1|  314|Homo sapiens NBPhox protein.               73   2e-13
BC008829-1|AAH08829.1|  355|Homo sapiens SHOX2 protein protein.        73   3e-13
AJ002368-1|CAA05342.1|  190|Homo sapiens homeobox protein SHOTb ...    73   3e-13
AJ002367-1|CAA05341.1|  251|Homo sapiens homeobox protein SHOTa ...    73   3e-13
AF022654-1|AAC39662.1|  190|Homo sapiens homeodomain protein pro...    73   3e-13
U31986-1|AAB08960.1|  326|Homo sapiens Cart-1 protein.                 72   5e-13
BC010923-1|AAH10923.1|  326|Homo sapiens cartilage paired-class ...    72   5e-13
AJ558236-1|CAD90155.1|  326|Homo sapiens cartilage paired-class ...    72   5e-13
Y11536-1|CAA72299.1|  292|Homo sapiens SHOXa protein protein.          72   6e-13
Y11535-1|CAA72298.1|  225|Homo sapiens SHOXb protein protein.          72   6e-13
U89331-1|AAC18820.1|  292|Homo sapiens pseudoautosomal homeodoma...    72   6e-13
U02309-1|AAA03628.1|  332|Homo sapiens PAX-3 protein.                  72   6e-13
U02308-1|AAA03627.1|  689|Homo sapiens protein ( Human PAX-3-FKH...    72   6e-13
BX004827-2|CAI41572.1|  225|Homo sapiens short stature homeobox ...    72   6e-13
BX004827-1|CAI41571.1|  292|Homo sapiens short stature homeobox ...    72   6e-13
BT007364-1|AAP36028.1|  299|Homo sapiens cone-rod homeobox protein.    72   6e-13
BC053672-1|AAH53672.1|  299|Homo sapiens CRX protein protein.          72   6e-13
BC016664-1|AAH16664.1|  299|Homo sapiens CRX protein protein.          72   6e-13
BC014645-1|AAH14645.1|  253|Homo sapiens paired related homeobox...    72   6e-13
AY662674-1|AAV84357.1|  268|Homo sapiens predicted NUP98/PRRX2 f...    72   6e-13
AL590369-7|CAI14511.1|  253|Homo sapiens paired related homeobox...    72   6e-13
AF061970-1|AAF17708.1|  253|Homo sapiens paired related homeobox...    72   6e-13
AF024711-1|AAB88418.1|  299|Homo sapiens cone rod homeobox prote...    72   6e-13
U81600-1|AAB39864.1|  164|Homo sapiens paired-like homeodomain p...    71   1e-12
BC128153-1|AAI28154.1|  361|Homo sapiens ceh-10 homeodomain cont...    70   2e-12
AY336059-1|AAQ01593.1|  361|Homo sapiens ceh-10 homeodomain cont...    70   2e-12
AY628411-1|AAT46026.1|  292|Homo sapiens short stature homeobox ...    70   2e-12
M95929-1|AAA60085.1|  199|Homo sapiens homeobox protein protein.       69   6e-12
BC074993-1|AAH74993.1|  245|Homo sapiens paired related homeobox...    69   6e-12
BC032579-1|AAH32579.1|  297|Homo sapiens orthodenticle homeobox ...    69   6e-12
AF298117-1|AAG16243.1|  297|Homo sapiens homeobox protein OTX2 p...    69   6e-12
BC001800-1|AAH01800.1|  325|Homo sapiens orthopedia homeobox pro...    68   1e-11
BC007621-1|AAH07621.1|  354|Homo sapiens orthodenticle homeobox ...    67   1e-11
AF093138-1|AAD31385.1|  289|Homo sapiens homeodomain protein OTX...    67   1e-11
AC009501-2|AAY24357.1|  354|Homo sapiens unknown protein.              67   1e-11
BC053599-1|AAH53599.1|  406|Homo sapiens extraembryonic, spermat...    66   3e-11
BC042633-1|AAH42633.1|  406|Homo sapiens extraembryonic, spermat...    66   3e-11
AY114148-1|AAM62141.1|  406|Homo sapiens ESX1L protein.                66   3e-11
AL137797-2|CAI19184.1|  377|Homo sapiens diencephalon/mesencepha...    66   3e-11
AL137797-1|CAI19185.1|  382|Homo sapiens diencephalon/mesencepha...    66   3e-11
AF398528-1|AAM90590.1|  382|Homo sapiens homeoprotein MBX-L prot...    66   3e-11
AF398527-1|AAM90589.1|  377|Homo sapiens homeoprotein MBX-S prot...    66   3e-11
AB037699-1|BAC00920.1|  382|Homo sapiens PaxB protein.                 66   3e-11
Z83853-1|CAI18752.1|  245|Homo sapiens protein ( Human DNA seque...    65   7e-11
BC113633-1|AAI13634.1|  245|Homo sapiens intestine-specific home...    65   7e-11
BC112212-1|AAI12213.1|  245|Homo sapiens intestine-specific home...    65   7e-11
AL024494-1|CAI19818.1|  245|Homo sapiens protein ( Human DNA seq...    65   7e-11
Z95332-5|CAG38363.1|  436|Homo sapiens paired box gene 6 (anirid...    64   9e-11
Z95332-4|CAG38362.1|  422|Homo sapiens paired box gene 6 (anirid...    64   9e-11
Z83307-5|CAG38086.1|  422|Homo sapiens paired box gene 6 (anirid...    64   9e-11
Z83307-4|CAG38087.1|  436|Homo sapiens paired box gene 6 (anirid...    64   9e-11
M93650-1|AAA36416.1|  422|Homo sapiens paired-box protein protein.     64   9e-11
M77844-2|AAA59963.1|  422|Homo sapiens oculorhombin protein.           64   9e-11
M77844-1|AAA59962.1|  422|Homo sapiens oculorhombin protein.           64   9e-11
BC011953-1|AAH11953.1|  422|Homo sapiens paired box gene 6 (anir...    64   9e-11
AY707088-1|AAU12168.1|  422|Homo sapiens paired box gene 6 isofo...    64   9e-11
AY047583-1|AAK95849.1|  422|Homo sapiens paired box protein PAX6...    64   9e-11
AB209177-1|BAD92414.1|  385|Homo sapiens paired box gene 6 isofo...    64   9e-11
DQ854812-1|ABI23978.1|  301|Homo sapiens visual system homeobox ...    64   1e-10
DQ854809-1|ABI23975.1|  280|Homo sapiens visual system homeobox ...    64   1e-10
DQ854808-1|ABI23974.1|  239|Homo sapiens visual system homeobox ...    64   1e-10
DQ854807-1|ABI23973.1|  365|Homo sapiens visual system homeobox ...    64   1e-10
BC126228-1|AAI26229.1|  365|Homo sapiens visual system homeobox ...    64   1e-10
BC069076-1|AAH69076.1|  226|Homo sapiens prophet of Pit1, paired...    64   1e-10
AL080312-3|CAI18918.1|  365|Homo sapiens visual system homeobox ...    64   1e-10
AF251034-1|AAF99657.1|  239|Homo sapiens homeodomain protein RIN...    64   1e-10
AF251033-1|AAF99656.1|  365|Homo sapiens homeodomain protein RIN...    64   1e-10
AF176797-1|AAF37425.2|  365|Homo sapiens transcription factor VS...    64   1e-10
AF076215-1|AAC77454.1|  226|Homo sapiens prophet of Pit1 protein.      64   1e-10
AF076214-1|AAC77453.1|  226|Homo sapiens prophet of Pit1 protein.      64   1e-10
AF041141-1|AAC27900.1|  226|Homo sapiens pituitary specific home...    64   1e-10
DQ854811-1|ABI23977.1|  236|Homo sapiens visual system homeobox ...    62   4e-10
DQ854810-1|ABI23976.1|  218|Homo sapiens visual system homeobox ...    62   4e-10
BC106010-1|AAI06011.1|  271|Homo sapiens paired-like homeodomain...    60   2e-09
BC013998-1|AAH13998.1|  324|Homo sapiens paired-like homeodomain...    60   2e-09
AF238048-1|AAK15048.1|  271|Homo sapiens paired-like homeodomain...    60   2e-09
AF048722-1|AAC39718.1|  324|Homo sapiens ALL1 responsive protein...    60   2e-09
AF048721-1|AAC39717.1|  317|Homo sapiens ALL1 responsive protein...    60   2e-09
AF048720-1|AAC39716.1|  271|Homo sapiens ALL1 responsive protein...    60   2e-09
BC011642-1|AAH11642.1|  302|Homo sapiens paired-like homeodomain...    60   3e-09
AL160011-2|CAH71624.1|  302|Homo sapiens paired-like homeodomain...    60   3e-09
AF041339-1|AAC24502.1|  302|Homo sapiens homeodomain protein pro...    60   3e-09
U69961-1|AAC16257.1|  271|Homo sapiens solurshin protein.              59   5e-09
U96402-1|AAC39544.1|  205|Homo sapiens GSC-2 protein.                  58   1e-08
U70370-1|AAC51126.1|  314|Homo sapiens hindlimb expressed homeob...    57   2e-08
BC009412-1|AAH09412.1|  314|Homo sapiens paired-like homeodomain...    57   2e-08
BC003685-1|AAH03685.1|  314|Homo sapiens PITX1 protein protein.        57   2e-08
AF009650-1|AAB65251.1|  314|Homo sapiens paired-like homeodomain...    57   2e-08
BC063580-1|AAH63580.1|  257|Homo sapiens goosecoid protein.            56   3e-08
AY177407-1|AAO18645.1|  257|Homo sapiens homeobox protein goosec...    56   3e-08
BC028970-1|AAH28970.1|  287|Homo sapiens distal-less homeobox 3 ...    52   7e-07
BC012361-1|AAH12361.1|  287|Homo sapiens distal-less homeobox 3 ...    52   7e-07
AF452638-2|AAL99504.1|  287|Homo sapiens distal-less homeo box 3...    52   7e-07
AF028233-1|AAC14397.1|  287|Homo sapiens distal-less homeobox pr...    52   7e-07
U51003-1|AAB40902.1|  328|Homo sapiens DLX-2 protein.                  51   9e-07
L07919-1|AAA19663.1|  244|Homo sapiens homeodomain protein DLX-2...    51   9e-07
BT006903-1|AAP35549.1|  289|Homo sapiens distal-less homeo box 5...    51   9e-07
BC032558-1|AAH32558.1|  328|Homo sapiens distal-less homeobox 2 ...    51   9e-07
BC006226-1|AAH06226.1|  289|Homo sapiens distal-less homeobox 5 ...    51   9e-07
AK023493-1|BAB14587.1|  289|Homo sapiens protein ( Homo sapiens ...    51   9e-07
AC104801-1|AAY14956.1|  328|Homo sapiens unknown protein.              51   9e-07
AC004774-2|AAC17833.1|  289|Homo sapiens unknown protein.              51   9e-07
BC103858-1|AAI03859.1|  184|Homo sapiens paired-like homeobox pr...    50   3e-06
BC103857-1|AAI03858.1|  184|Homo sapiens paired-like homeobox pr...    50   3e-06
BC069529-1|AAH69529.1|  184|Homo sapiens paired-like homeobox pr...    50   3e-06
BC069324-1|AAH69324.1|  184|Homo sapiens paired-like homeobox pr...    50   3e-06
AY099086-1|AAM22794.1|  184|Homo sapiens paired-like homeobox pr...    50   3e-06
AB208823-1|BAD92060.1|  234|Homo sapiens distal-less homeo box 2...    50   3e-06
BC113441-1|AAI13442.1|  232|Homo sapiens Mix1 homeobox-like 1 (X...    48   9e-06
BC111974-1|AAI11975.1|  232|Homo sapiens Mix-like homeobox prote...    48   9e-06
AL592045-3|CAH71924.1|  232|Homo sapiens Mix1 homeobox-like 1 (X...    48   9e-06
AF284337-1|AAG14458.1|  221|Homo sapiens SEBOX protein.                48   9e-06
AF218357-1|AAK01479.1|  232|Homo sapiens homeodomain protein MIX...    48   9e-06
AF211891-1|AAG35776.1|  232|Homo sapiens Mix.1 homeobox-like pro...    48   9e-06
AC005023-1|AAC78617.1|  148|Homo sapiens WUGSC:H_GS421I03.1 prot...    48   9e-06
AJ001481-1|CAA04776.1|  170|Homo sapiens DUX1 protein.                 47   1e-05
AF133131-2|AAD33598.1|  170|Homo sapiens homeobox protein DUX5 p...    47   1e-05
AF133131-1|AAL02243.1|  197|Homo sapiens homeobox protein DUX3 p...    47   1e-05
AL354735-5|CAI16566.1|  327|Homo sapiens BarH-like 1 (Drosophila...    47   2e-05
AK054797-1|BAB70807.1|  327|Homo sapiens protein ( Homo sapiens ...    47   2e-05
AJ237816-1|CAB92439.1|  171|Homo sapiens BARHL1 protein protein.       47   2e-05
AF321618-1|AAK52674.1|  327|Homo sapiens BARHL1 protein.               47   2e-05
BC126441-1|AAI26442.1|  387|Homo sapiens BarH-like 2 (Drosophila...    46   3e-05
BC126439-1|AAI26440.1|  387|Homo sapiens BarH-like 2 (Drosophila...    46   3e-05
AY338397-1|AAQ01189.1|  387|Homo sapiens BARH-like 2 protein pro...    46   3e-05
AF133130-2|AAD33597.1|  170|Homo sapiens homeobox protein DUX3 p...    46   5e-05
AF133130-1|AAL02242.1|  197|Homo sapiens homeobox protein DUX3 p...    46   5e-05
Y17791-1|CAB56166.1|  290|Homo sapiens VAX2 protein protein.           45   8e-05
U82811-1|AAB88275.1|  185|Homo sapiens HANF protein.                   45   8e-05
U65437-1|AAB39561.1|   79|Homo sapiens homeodomain-containing pr...    45   8e-05
BT007035-1|AAP35683.1|  290|Homo sapiens ventral anterior homeob...    45   8e-05
BC112089-1|AAI12090.1|  185|Homo sapiens HESX homeobox 1 protein.      45   8e-05
BC093979-1|AAH93979.1|  185|Homo sapiens HESX homeobox 1 protein.      45   8e-05
BC069515-1|AAH69515.1|  185|Homo sapiens HESX homeobox 1 protein.      45   8e-05
BC006336-1|AAH06336.1|  290|Homo sapiens ventral anterior homeob...    45   8e-05
AL731557-2|CAI14825.1|  334|Homo sapiens ventral anterior homeob...    45   8e-05
AF059734-1|AAC24523.1|  185|Homo sapiens homeodomain transcripti...    45   8e-05
X90828-1|CAA62342.1|  280|Homo sapiens Lbx1 transcription factor...    44   1e-04
BC069156-1|AAH69156.1|  281|Homo sapiens ladybird homeobox 1 pro...    44   1e-04
AL135794-1|CAH72508.2|  281|Homo sapiens Ladybird homeobox homol...    44   1e-04
X68879-1|CAA48750.1|  153|Homo sapiens EMX1 protein.                   44   1e-04
U18977-1|AAA87408.1|  135|Homo sapiens protein ( Human D4S2463 h...    44   1e-04
D38024-1|BAA07227.1|  853|Homo sapiens facioscapulohumeral muscu...    44   1e-04
BC045762-1|AAH45762.2|  290|Homo sapiens empty spiracles homeobo...    44   1e-04
BC037242-1|AAH37242.1|  119|Homo sapiens empty spiracles homeobo...    44   1e-04
AY500824-1|AAS15569.1|  374|Homo sapiens double homeobox 4c prot...    44   1e-04
AY257976-1|AAO91939.1|  255|Homo sapiens transcription factor DL...    44   1e-04
AY044051-1|AAK91509.1|  424|Homo sapiens double homeobox protein...    44   1e-04
AF117653-2|AAD54068.2|  424|Homo sapiens double homeobox protein...    44   1e-04
AF117653-1|AAD54067.2|  424|Homo sapiens double homeobox protein...    44   1e-04
AC015976-2|AAY14732.1|  235|Homo sapiens unknown protein.              44   1e-04
AC012366-2|AAY14744.1|  257|Homo sapiens unknown protein.              44   1e-04
BC064363-1|AAH64363.1|  254|Homo sapiens BARX1 protein protein.        43   2e-04
BC036189-1|AAH36189.2|  255|Homo sapiens distal-less homeobox 1 ...    43   2e-04
AL357073-1|CAH71535.1|  225|Homo sapiens BarH-like homeobox 1 pr...    43   2e-04
AF213356-1|AAG23738.1|  225|Homo sapiens homeobox transcription ...    43   2e-04
L32607-2|AAA83547.1|   60|Homo sapiens protein ( Human homeobox-...    43   3e-04
BC075090-1|AAH75090.1|  304|Homo sapiens GS homeobox 2 protein.        42   4e-04
BC075089-1|AAH75089.1|  304|Homo sapiens homeobox protein GSH-2 ...    42   4e-04
AF439445-1|AAM08285.1|  304|Homo sapiens homeobox protein GSH-2 ...    42   4e-04
AF306344-1|AAK00880.1|  304|Homo sapiens homeobox protein 2 prot...    42   4e-04
AB028838-1|BAB84822.1|  304|Homo sapiens homeobox protein GSH-2 ...    42   4e-04
U10492-1|AAA19983.1|  254|Homo sapiens Mox1 protein.                   42   6e-04
L11239-1|AAA36002.1|  139|Homo sapiens homeobox protein protein.       42   6e-04
BC109381-1|AAI09382.1|  175|Homo sapiens DLX6 protein protein.         42   6e-04
BC103690-1|AAI03691.1|  175|Homo sapiens DLX6 protein protein.         42   6e-04
BC103689-1|AAI03690.1|  175|Homo sapiens DLX6 protein protein.         42   6e-04
BC103688-1|AAI03689.1|  175|Homo sapiens DLX6 protein protein.         42   6e-04
BC069506-1|AAH69506.1|  254|Homo sapiens mesenchyme homeobox 1 p...    42   6e-04
BC069474-1|AAH69474.1|  254|Homo sapiens mesenchyme homeobox 1 p...    42   6e-04
BC069363-1|AAH69363.1|  175|Homo sapiens DLX6 protein protein.         42   6e-04
AC004774-1|AAC17832.1|  175|Homo sapiens unknown protein.              42   6e-04
U31468-1|AAC03241.1|  347|Homo sapiens homeobox protein protein.       42   7e-04
U02080-1|AAA17406.1|  133|Homo sapiens homeobox protein protein.       42   7e-04
AF118452-1|AAD39907.1|  348|Homo sapiens homeobox protein GBX2 p...    42   7e-04
AC079135-1|AAX93240.1|  348|Homo sapiens unknown protein.              42   7e-04
X68880-1|CAA48751.1|  158|Homo sapiens EMX2 protein.                   41   0.001
BC101696-1|AAI01697.1|  186|Homo sapiens ventral anterior homeob...    41   0.001
BC101694-1|AAI01695.1|  186|Homo sapiens ventral anterior homeob...    41   0.001
BC040321-1|AAH40321.1|  356|Homo sapiens LIM homeobox 8 protein.       41   0.001
AL731557-1|CAI14824.1|  186|Homo sapiens ventral anterior homeob...    41   0.001
AK127095-1|BAC86826.1|  186|Homo sapiens protein ( Homo sapiens ...    41   0.001
AK055041-1|BAB70842.1|  252|Homo sapiens protein ( Homo sapiens ...    41   0.001
AF301598-1|AAK95496.1|  252|Homo sapiens empty spiracles-like pr...    41   0.001
X69295-1|CAA49156.1|  267|Homo sapiens transcription factor prot...    41   0.001
S75361-1|AAB33867.1|  267|Homo sapiens Msx-2 homolog protein.          41   0.001
S75308-1|AAD14169.1|  267|Homo sapiens Msx-2 homolog protein.          41   0.001
M97676-1|AAA52683.1|  297|Homo sapiens homeobox protein protein.       41   0.001
M76732-1|AAA58665.1|  297|Homo sapiens HOX7 protein.                   41   0.001
L22499-1|AAB42178.1|  267|Homo sapiens Msx2 protein.                   41   0.001
D89377-1|BAA13949.1|  267|Homo sapiens MSX-2 protein.                  41   0.001
D31771-1|BAA06549.1|  267|Homo sapiens MSX-2 protein.                  41   0.001
D14970-1|BAA03611.1|  172|Homo sapiens HOX-8 protein protein.          41   0.001
BT009814-1|AAP88816.1|  267|Homo sapiens msh homeo box homolog 2...    41   0.001
BC111572-1|AAI11573.1|  279|Homo sapiens BarH-like homeobox 2 pr...    41   0.001
BC111432-1|AAI11433.1|  279|Homo sapiens BarH-like homeobox 2 pr...    41   0.001
BC069378-1|AAH69378.1|  279|Homo sapiens BarH-like homeobox 2 pr...    41   0.001
BC067353-1|AAH67353.1|  297|Homo sapiens MSX1 protein protein.         41   0.001
BC021719-1|AAH21719.1|  288|Homo sapiens PEPP subfamily gene 2 p...    41   0.001
BC021285-1|AAH21285.4|  303|Homo sapiens msh homeobox 1 protein.       41   0.001
BC015509-1|AAH15509.1|  267|Homo sapiens msh homeobox 2 protein.       41   0.001
AL590526-1|CAC36519.1|  288|Homo sapiens hypothetical protein pr...    41   0.001
AK058125-1|BAB71675.1|  288|Homo sapiens protein ( Homo sapiens ...    41   0.001
AJ243512-1|CAB50736.1|  279|Homo sapiens Barx2 protein protein.        41   0.001
AF426432-1|AAL17870.1|  297|Homo sapiens muscle segment homeobox...    41   0.001
AF317219-1|AAL02160.1|  288|Homo sapiens homeobox protein protein.     41   0.001
AF171222-1|AAF09453.1|  254|Homo sapiens BARX2 protein.                41   0.001
AF031924-1|AAC04705.1|  254|Homo sapiens barx2 protein.                41   0.001
BC111966-1|AAI11967.1|  333|Homo sapiens bagpipe homeobox 1 prot...    40   0.002
AF009802-1|AAB82784.1|  333|Homo sapiens homeodomain protein pro...    40   0.002
AF009801-1|AAB82783.1|  333|Homo sapiens homeodomain protein pro...    40   0.002
AF005260-1|AAC39536.1|  333|Homo sapiens homeodomain-containing ...    40   0.002
BC025788-1|AAH25788.1|  293|Homo sapiens NK2 transcription facto...    40   0.002
AY305861-1|AAP74384.1|  194|Homo sapiens ladybird-like homeodoma...    40   0.002
AL390738-1|CAC12721.1|  264|Homo sapiens GS homeobox 1 protein.        40   0.002
AL353719-1|CAI16899.1|  364|Homo sapiens NK2 transcription facto...    40   0.002
AF229631-1|AAF44651.1|  211|Homo sapiens homeobox protein NKX2-3...    40   0.002
AB044158-1|BAB78693.1|  264|Homo sapiens homeobox protein Gsh-1 ...    40   0.002
AB044157-1|BAB78692.1|  264|Homo sapiens homeobox protein Gsh-1 ...    40   0.002
L32607-1|AAA83546.1|   60|Homo sapiens protein ( Human homeobox-...    40   0.003
X82629-1|CAA57949.1|  303|Homo sapiens Mox-2 protein.                  39   0.004
X16666-1|CAA34656.1|  301|Homo sapiens protein ( Human HOX2I mRN...    39   0.004
L36328-1|AAA58497.1|  302|Homo sapiens GAX protein.                    39   0.004
CR536553-1|CAG38790.1|  303|Homo sapiens MEOX2 protein.                39   0.004
BC017021-1|AAH17021.1|  303|Homo sapiens mesenchyme homeobox 2 p...    39   0.004
AF287350-1|AAG31762.1|  108|Homo sapiens homeobox B1 protein.          39   0.004
X99894-1|CAA68169.1|  283|Homo sapiens insulin promoter factor 1...    38   0.007
U73328-1|AAC50942.1|  167|Homo sapiens DLX7 protein.                   38   0.007
U37431-1|AAC50249.1|  330|Homo sapiens HOXA1 protein.                  38   0.007
U35632-1|AAA88820.1|  283|Homo sapiens insulin promoter factor 1...    38   0.007
U31762-1|AAC51171.1|  285|Homo sapiens homeobox protein protein.       38   0.007
U30329-1|AAA74012.1|  283|Homo sapiens insulin promoter factor 1...    38   0.007
U10421-1|AAA86954.1|  335|Homo sapiens HOX A1 homeodomain protei...    38   0.007
S82178-1|AAB47101.1|  283|Homo sapiens insulin promoter factor 1...    38   0.007
S79910-1|AAB35423.2|  330|Homo sapiens HOXA1 protein.                  38   0.007
BT006978-1|AAP35624.1|  240|Homo sapiens distal-less homeobox 4 ...    38   0.007
BC032547-1|AAH32547.1|  335|Homo sapiens homeobox A1 protein.          38   0.007
BC016145-1|AAH16145.1|  240|Homo sapiens distal-less homeobox 4 ...    38   0.007
AL353195-1|CAH72544.1|  283|Homo sapiens insulin promoter factor...    38   0.007
AF452638-1|AAL99503.1|  240|Homo sapiens distal-less homeo box 7...    38   0.007
AF254115-1|AAG31975.1|  240|Homo sapiens beta protein 1 BP1 prot...    38   0.007
AF068744-1|AAC31481.1|   80|Homo sapiens double homeodomain prot...    38   0.007
AF049893-1|AAC05157.1|  283|Homo sapiens insulin upstream factor...    38   0.007
AF035260-1|AAB88463.1|  283|Homo sapiens insulin promoter factor...    38   0.007
AF028235-1|AAC14398.1|  168|Homo sapiens distal-less homeobox pr...    38   0.007
AC004079-1|AAS00374.1|  335|Homo sapiens unknown protein.              38   0.007
DQ442656-1|ABD97848.1|  260|Homo sapiens transcription factor PA...    38   0.009
BC107150-1|AAI07151.1|  341|Homo sapiens PAX4 protein protein.         38   0.009
BC107149-1|AAI07150.1|  257|Homo sapiens PAX4 protein protein.         38   0.009
BC074761-1|AAH74761.1|  343|Homo sapiens paired box gene 4 protein.    38   0.009
AF107453-1|AAD41467.1|  355|Homo sapiens homeotic protein HB9 pr...    38   0.009
AF043978-1|AAD02289.1|  343|Homo sapiens paired-box transcriptio...    38   0.009
AC004534-2|AAC12957.1|  392|Homo sapiens WUGSC:H_DJ0545C24.1 pro...    38   0.009
AB008913-1|BAA24506.1|  350|Homo sapiens Pax-4 protein.                38   0.009
X56537-1|CAA39882.2|  237|Homo sapiens DNA binding protein protein.    38   0.012
U07664-1|AAB60647.1|  401|Homo sapiens HB9 homeobox protein prot...    38   0.012
S38742-1|AAB19293.1|  330|Homo sapiens HOX11 protein.                  38   0.012
M75952-1|AAA58662.1|  330|Homo sapiens homeobox protein protein.       38   0.012
M62626-1|AAA36719.1|  330|Homo sapiens homeobox protein protein.       38   0.012
BC130530-1|AAI30531.1|  257|Homo sapiens TLX1 protein protein.         38   0.012
AL590524-1|CAC36517.1|  288|Homo sapiens hypothetical protein pr...    38   0.012
AL357395-1|CAH72448.1|  330|Homo sapiens T-cell leukemia, homeob...    38   0.012
AJ009794-2|CAA08834.1|  330|Homo sapiens HOX11 protein protein.        38   0.012
BC128233-1|AAI28234.1|  284|Homo sapiens caudal type homeobox tr...    37   0.016
AL450108-1|CAI40795.1|  284|Homo sapiens caudal type homeobox tr...    37   0.016
AF029879-1|AAD01894.1|  284|Homo sapiens caudal-4 protein.             37   0.016
AF003530-1|AAB66319.1|  284|Homo sapiens homeobox protein CDX4 p...    37   0.016
M99587-1|AAF70205.1|  373|Homo sapiens H6 homeodomain protein pr...    37   0.021
BC103938-1|AAI03939.1|  362|Homo sapiens LIM homeobox 6 protein.       37   0.021
BC103937-1|AAI03938.1|  363|Homo sapiens LIM homeobox 6 protein.       37   0.021
BC103936-1|AAI03937.1|  348|Homo sapiens LIM homeobox 6 protein.       37   0.021
BC014419-1|AAH14419.1|  114|Homo sapiens DLX4 protein protein.         37   0.021
BC005812-1|AAH05812.1|  114|Homo sapiens DLX4 protein protein.         37   0.021
AL162424-3|CAI14704.1|  348|Homo sapiens LIM homeobox 6 protein.       37   0.021
AL162424-2|CAI14703.1|  363|Homo sapiens LIM homeobox 6 protein.       37   0.021
AF154915-1|AAF79044.1|  275|Homo sapiens transcription factor HO...    37   0.021
AB031042-1|BAA83423.1|  348|Homo sapiens LIM-homeodomain (LHX) p...    37   0.021
AB031041-1|BAA83422.1|  363|Homo sapiens LIM-homeodomain (LHX) p...    37   0.021
U89845-1|AAB49696.1|   60|Homo sapiens homeodomain-containing BA...    36   0.028
BC109394-1|AAI09395.1|  159|Homo sapiens HOXD11 protein protein.       36   0.028
AF154915-2|AAF79045.1|  338|Homo sapiens transcription factor HO...    36   0.028
X61755-1|CAA43894.1|  222|Homo sapiens homeoprotein HOX3D protein.     36   0.037
U91540-1|AAB68662.1|  234|Homo sapiens prostate-specific, androg...    36   0.037
U80669-1|AAB38747.1|  234|Homo sapiens androgen regulated homeob...    36   0.037
BC074864-1|AAH74864.1|  234|Homo sapiens NK3 transcription facto...    36   0.037
BC074863-1|AAH74863.1|  234|Homo sapiens NK3 transcription facto...    36   0.037
AF249671-1|AAG39737.1|  165|Homo sapiens homeodomain protein NKX...    36   0.037
AF249670-1|AAG39736.1|  185|Homo sapiens homeodomain protein NKX...    36   0.037
AF249669-1|AAG39735.1|  190|Homo sapiens homeodomain protein NKX...    36   0.037
AF247704-1|AAG09781.1|  234|Homo sapiens homeobox protein NKX3.1...    36   0.037
U51095-1|AAB40602.1|  265|Homo sapiens homeobox protein Cdx1 pro...    36   0.049
U15212-1|AAC50237.1|  203|Homo sapiens caudal-type homeobox prot...    36   0.049
M59983-1|AAA52414.1|  157|Homo sapiens EVX2 protein.                   36   0.049
BC127122-1|AAI27123.2|  154|Homo sapiens CDX1 protein protein.         36   0.049
BC104823-1|AAI04824.1|  277|Homo sapiens NK6 transcription facto...    36   0.049
BC101635-1|AAI01636.1|  277|Homo sapiens NK6 transcription facto...    36   0.049
BC096252-1|AAH96252.2|  154|Homo sapiens CDX1 protein protein.         36   0.049
BC096251-1|AAH96251.1|  130|Homo sapiens CDX1 protein protein.         36   0.049
BC017291-1|AAH17291.1|  291|Homo sapiens T-cell leukemia homeobo...    36   0.049
AL392043-3|CAI39943.1|  277|Homo sapiens NK6 transcription facto...    36   0.049
AJ223798-1|CAA11550.1|  291|Homo sapiens HOX11L2 protein.              36   0.049
AF239666-1|AAF61234.1|  265|Homo sapiens CDX1 homeobox protein p...    36   0.049
AF184215-1|AAK13251.1|  277|Homo sapiens GTX protein.                  36   0.049
AC005550-1|AAC33152.1|  230|Homo sapiens unknown protein.              36   0.049
X16665-1|CAA34655.1|  356|Homo sapiens protein ( Human HOX2H mRN...    35   0.064
X16176-1|CAA34298.1|   77|Homo sapiens HOX-2.8 protein (77 AA) p...    35   0.064
X14571-1|CAA32709.1|   60|Homo sapiens K8 homeo protein protein.       35   0.064
M92299-1|AAA52682.1|  269|Homo sapiens homeobox protein protein.       35   0.064
M26679-1|AAA58663.1|  270|Homo sapiens HOX 1.3 protein.                35   0.064
K02572-1|AAA52681.1|  118|Homo sapiens protein ( Human putative ...    35   0.064
CR542256-1|CAG47052.1|  270|Homo sapiens HOXA5 protein.                35   0.064
BT009744-1|AAP88746.1|  270|Homo sapiens homeo box A5 protein.         35   0.064
BC130571-1|AAI30572.1|  376|Homo sapiens homeobox A2 protein.          35   0.064
BC117247-1|AAI17248.1|  269|Homo sapiens homeobox B5 protein.          35   0.064
BC108916-1|AAI08917.1|  258|Homo sapiens VENT homeobox homolog (...    35   0.064
BC108915-1|AAI08916.1|  258|Homo sapiens VENT homeobox homolog (...    35   0.064
BC074806-1|AAH74806.1|  356|Homo sapiens homeobox B2 protein.          35   0.064
BC074805-1|AAH74805.1|  356|Homo sapiens homeobox B2 protein.          35   0.064
BC013682-1|AAH13682.1|  270|Homo sapiens homeobox A5 protein.          35   0.064
AL445199-6|CAI17343.1|  258|Homo sapiens VENT homeobox homolog (...    35   0.064
AF288039-1|AAK83043.1|  258|Homo sapiens hemopoietic progenitor ...    35   0.064
AF287967-3|AAG31553.1|  269|Homo sapiens homeobox B5 protein.          35   0.064
AF068006-1|AAC82375.1|  258|Homo sapiens hemopoietic progenitor ...    35   0.064
AC004079-2|AAS00375.1|  376|Homo sapiens unknown protein.              35   0.064
X58431-1|CAA41335.1|  224|Homo sapiens HOX 2.2 protein.                35   0.085
X16667-1|CAA34657.1|  431|Homo sapiens protein ( Human HOX2G mRN...    35   0.085
X16175-1|CAA34297.1|   66|Homo sapiens HOX-2.7 protein (66 AA) p...    35   0.085
X16174-1|CAA34296.1|   68|Homo sapiens HOX-2.6 protein (68 AA) p...    35   0.085
CR542277-1|CAG47073.1|  270|Homo sapiens HOXA5 protein.                35   0.085
BC049204-1|AAH49204.1|  251|Homo sapiens homeobox B4 protein.          35   0.085
BC040948-1|AAH40948.1|  313|Homo sapiens homeobox A11 protein.         35   0.085
BC033706-1|AAH33706.1|  304|Homo sapiens HOXA11 protein protein.       35   0.085
BC014651-1|AAH14651.1|  224|Homo sapiens homeobox B6 protein.          35   0.085
AL137449-1|CAB70742.1|  246|Homo sapiens hypothetical protein pr...    35   0.085
AJ270993-1|CAB65909.1|  224|Homo sapiens homeobox protein protein.     35   0.085
AF307160-1|AAG45052.1|  251|Homo sapiens HOXB4 protein.                35   0.085
AF287967-5|AAG31555.1|  431|Homo sapiens homeobox B3 protein.          35   0.085
AF287967-4|AAG31554.1|  251|Homo sapiens homeobox B4 protein.          35   0.085
AF287967-2|AAG31552.1|  224|Homo sapiens homeobox B6 protein.          35   0.085
AF071164-1|AAC80455.1|  313|Homo sapiens homeobox A11 protein.         35   0.085
AF039307-1|AAB94761.1|  313|Homo sapiens homeobox A11 protein.         35   0.085
X60655-1|CAA43062.1|  407|Homo sapiens EVX1 protein.                   34   0.11 
X16172-1|CAA34294.1|   78|Homo sapiens HOX-2.5 protein (78 AA) p...    34   0.11 
U68782-1|AAB07598.1|  407|Homo sapiens EVX1 protein.                   34   0.11 
U45255-1|AAC63385.1|  416|Homo sapiens paired-box protein PAX2 p...    34   0.11 
M89470-1|AAA60024.1|  393|Homo sapiens paired-box protein protein.     34   0.11 
M74297-1|AAA58664.1|  320|Homo sapiens Hox 1.4 protein.                34   0.11 
M28199-1|AAA53290.1|   73|Homo sapiens homeobox protein protein.       34   0.11 
L25597-1|AAA36417.1|  396|Homo sapiens paired box protein protein.     34   0.11 
BC132758-1|AAI32759.1|  273|Homo sapiens homeobox (H6 family) 2 ...    34   0.11 
BC126994-1|AAI26995.2|  118|Homo sapiens HOXA4 protein protein.        34   0.11 
BC104917-1|AAI04918.1|  233|Homo sapiens homeobox A6 protein.          34   0.11 
BC104915-1|AAI04916.1|  233|Homo sapiens homeobox A6 protein.          34   0.11 
BC069497-1|AAH69497.1|  233|Homo sapiens homeobox A6 protein.          34   0.11 
BC050442-1|AAH50442.1|  264|Homo sapiens homeobox C4 protein.          34   0.11 
BC015565-1|AAH15565.1|  250|Homo sapiens HOXB9 protein protein.        34   0.11 
BC006356-1|AAH06356.1|  284|Homo sapiens T-cell leukemia homeobo...    34   0.11 
AY153483-1|AAN77899.1|  308|Homo sapiens paired box transcriptio...    34   0.11 
AY014296-1|AAG42144.1|  250|Homo sapiens HOXB9 protein.                34   0.11 
AL589862-2|CAI17856.1|  394|Homo sapiens paired box gene 2 protein.    34   0.11 
AL589862-1|CAI17855.1|  396|Homo sapiens paired box gene 2 protein.    34   0.11 
AL138762-5|CAH70952.1|  394|Homo sapiens paired box gene 2 protein.    34   0.11 
AL138762-4|CAH70951.1|  396|Homo sapiens paired box gene 2 protein.    34   0.11 
AJ002607-1|CAA05636.1|  275|Homo sapiens HOX11L1 protein.              34   0.11 
AF249672-1|AAG39738.1|  159|Homo sapiens homeodomain protein NKX...    34   0.11 
AB008501-1|BAA83463.1|  284|Homo sapiens NCX protein.                  34   0.11 
X17360-1|CAA35237.1|  255|Homo sapiens hox 5.1 protein protein.        34   0.15 
X04706-1|CAA28411.1|  255|Homo sapiens protein ( Human homeobox ...    34   0.15 
U66799-1|AAD11962.1|  367|Homo sapiens NK homeobox protein protein.    34   0.15 
BC074797-1|AAH74797.1|  255|Homo sapiens homeobox D4 protein.          34   0.15 
BC016763-1|AAH16763.1|  255|Homo sapiens homeobox D4 protein.          34   0.15 
M30598-1|AAA36005.1|   99|Homo sapiens protein ( Human homeobox ...    33   0.20 
M16937-1|AAA36003.1|  217|Homo sapiens protein ( Human homeo box...    33   0.20 
BC015345-1|AAH15345.1|  217|Homo sapiens homeobox B7 protein.          33   0.20 
BC015180-1|AAH15180.1|  443|Homo sapiens homeobox A3 protein.          33   0.20 
AF032095-1|AAD01939.2|  230|Homo sapiens homeobox protein HOXA7 ...    33   0.20 
AC004079-3|AAS00376.1|  443|Homo sapiens unknown protein.              33   0.20 
Y13709-1|CAA74038.1|  313|Homo sapiens caudal-type homeobox prot...    33   0.26 
X84803-1|CAA59270.1|  229|Homo sapiens HOX 1.1 (A7) protein.           33   0.26 
U51096-1|AAB40603.1|  311|Homo sapiens homeobox protein Cdx2 pro...    33   0.26 
L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain p...    33   0.26 
D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhance...    33   0.26 
BC014461-1|AAH14461.1|  313|Homo sapiens caudal type homeobox tr...    33   0.26 
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain...    33   0.26 
AL591024-2|CAH70633.1|  313|Homo sapiens caudal type homeobox tr...    33   0.26 
AJ278431-1|CAB94779.1|  313|Homo sapiens caudal type homeobox tr...    33   0.26 
AJ005814-1|CAA06713.1|  230|Homo sapiens hoxA7 protein.                33   0.26 
AF026397-1|AAB94604.1|  230|Homo sapiens homeobox transcription ...    33   0.26 
AF007886-1|AAD05200.1|  313|Homo sapiens caudal-type homeobox pr...    33   0.26 
AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein.              33   0.26 
AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain...    33   0.26 
X59372-1|CAA42016.1|  342|Homo sapiens homeobox protein protein.       33   0.34 
X15506-1|CAA33528.1|   79|Homo sapiens Hox5.2 gene product (79 A...    33   0.34 
U82827-1|AAC50993.1|  388|Homo sapiens transcription factor HOXA...    33   0.34 
S49765-1|AAB19469.2|  120|Homo sapiens homeobox gene protein.          33   0.34 
BC075791-1|AAH75791.1|  388|Homo sapiens homeobox A13 protein.         33   0.34 
BC053894-1|AAH53894.1|  260|Homo sapiens homeobox C9 protein.          33   0.34 
BC044855-1|AAH44855.2|  342|Homo sapiens homeobox D9 protein.          33   0.34 
BC032769-1|AAH32769.1|  263|Homo sapiens HOXC9 protein protein.        33   0.34 
AY014302-1|AAG42151.1|  260|Homo sapiens HOXC9 protein.                33   0.34 
Y09980-1|CAA71102.1|  432|Homo sapiens HOXD3 protein.                  32   0.45 
X74861-1|CAA52854.1|   39|Homo sapiens HPX-2 protein.                  32   0.45 
X07495-1|CAA30376.1|  264|Homo sapiens protein ( Human mRNA for ...    32   0.45 
D11117-1|BAA01891.1|  416|Homo sapiens homeodomain protein protein.    32   0.45 
BC041090-1|AAH41090.1|  239|Homo sapiens NK2 transcription facto...    32   0.45 
BC014477-1|AAH14477.1|  328|Homo sapiens homeobox D1 protein.          32   0.45 
BC008789-1|AAH08789.1|  432|Homo sapiens homeobox D3 protein.          32   0.45 
BC005124-1|AAH05124.1|  432|Homo sapiens homeobox D3 protein.          32   0.45 
AY014298-1|AAG42145.1|  264|Homo sapiens HOXC4 protein.                32   0.45 
AF241528-1|AAG44444.1|  328|Homo sapiens homeobox-containing tra...    32   0.45 
AF202118-1|AAG29939.1|  328|Homo sapiens HOX D1 protein protein.       32   0.45 
AF000297-1|AAC71082.1|  239|Homo sapiens nk-2-related transcript...    32   0.45 
AF000295-1|AAC71081.1|  239|Homo sapiens nk-2-related transcript...    32   0.45 
U59298-1|AAD10852.1|  431|Homo sapiens hox homeobox transcriptio...    31   0.79 
U07559-1|AAA81946.1|  346|Homo sapiens ISL-1 protein.                  31   0.79 
S70721-1|AAD14064.1|  349|Homo sapiens isl-1 protein.                  31   0.79 
BC031213-1|AAH31213.1|  349|Homo sapiens ISL1 transcription fact...    31   0.79 
AJ004949-1|CAA06237.1|   46|Homo sapiens homeobox protein protein.     31   0.79 
U91935-1|AAB49728.1|  648|Homo sapiens retina-derived POU-domain...    31   1.0  
U91934-1|AAB49727.1|  684|Homo sapiens retina-derived POU-domain...    31   1.0  
AY937237-1|AAY17396.1|  284|Homo sapiens PSGD protein protein.         31   1.0  
AC005483-1|AAC83404.2|  484|Homo sapiens unknown protein.              31   1.0  
Z21967-1|CAA79978.1|  105|Homo sapiens mPOU homeobox protein pro...    31   1.4  
Z21966-1|CAA79977.1|  301|Homo sapiens mPOU homeobox protein pro...    31   1.4  
DQ426868-1|ABD90533.1|   54|Homo sapiens cone-rod homeobox protein.    31   1.4  
BC111936-1|AAI11937.1|  406|Homo sapiens LIM homeobox 1 protein.       31   1.4  
BC109230-1|AAI09231.1|  402|Homo sapiens LIM homeobox 5 protein.       31   1.4  
BC107090-1|AAI07091.1|   86|Homo sapiens POU6F1 protein protein.       31   1.4  
BC101674-1|AAI01675.1|  406|Homo sapiens LIM homeobox 1 protein.       31   1.4  
BC074765-1|AAH74765.3|  301|Homo sapiens POU domain, class 6, tr...    31   1.4  
BC051326-1|AAH51326.2|  301|Homo sapiens POU domain, class 6, tr...    31   1.4  
BC020470-1|AAH20470.1|  260|Homo sapiens LHX1 protein protein.         31   1.4  
BC011759-1|AAH11759.1|  390|Homo sapiens LIM homeobox 4 protein.       31   1.4  
AY053457-1|AAL07260.1|  390|Homo sapiens LIM homeodomain protein...    31   1.4  
AL139141-1|CAI19364.1|  390|Homo sapiens LIM homeobox 4 protein.       31   1.4  
AL138781-3|CAI16879.1|  397|Homo sapiens LIM homeobox 3 protein.       31   1.4  
AL138781-2|CAI16878.1|  402|Homo sapiens LIM homeobox 3 protein.       31   1.4  
AK223249-1|BAD96969.1|  217|Homo sapiens homeo box B7 variant pr...    31   1.4  
AK131230-1|BAD18413.1|  339|Homo sapiens protein ( Homo sapiens ...    31   1.4  
AF405430-1|AAM91896.1|  390|Homo sapiens LIM homeobox protein 4 ...    31   1.4  
AF367089-1|AAL26314.1|  397|Homo sapiens LIM homeobox protein 3 ...    31   1.4  
AF291181-1|AAG36963.1|  402|Homo sapiens LHX5 protein protein.         31   1.4  
AF282899-1|AAK69169.1|  367|Homo sapiens LIM homeobox protein pr...    31   1.4  
AF251562-1|AAM19349.1|  239|Homo sapiens LIM homeobox protein pr...    31   1.4  
AF211950-1|AAG10399.1|  397|Homo sapiens lim-homeobox transcript...    31   1.4  
AF179849-1|AAK70923.1|  390|Homo sapiens LIM homeobox protein 4 ...    31   1.4  
AF156889-1|AAF36809.1|  402|Homo sapiens LIM homeobox protein 3 ...    31   1.4  
AF156888-1|AAF36808.1|  397|Homo sapiens LIM homeobox protein 3 ...    31   1.4  
AF096169-1|AAF17292.1|  370|Homo sapiens LHX3 protein protein.         31   1.4  
AF096168-1|AAF17291.1|  370|Homo sapiens LHX3 protein protein.         31   1.4  
AB055703-1|BAB62817.1|  367|Homo sapiens LIM homeobox 4 protein.       31   1.4  
AB037683-1|BAC01272.1|  240|Homo sapiens LIM homeobox protein 4 ...    31   1.4  
X16173-1|CAA34295.1|   70|Homo sapiens HOX-2.4 protein (70 AA) p...    30   1.8  
S82986-1|AAB46892.1|  235|Homo sapiens HOXC6 protein.                  30   1.8  
M96944-1|AAA58397.1|  391|Homo sapiens transcription factor prot...    30   1.8  
M16938-1|AAA36007.1|  153|Homo sapiens protein ( Human homeo box...    30   1.8  
EF064717-1|ABK41900.1|  391|Homo sapiens paired box gene 5 (B-ce...    30   1.8  
DQ845346-1|ABI33105.1|  877|Homo sapiens PAX5/FOXP1 fusion prote...    30   1.8  
DQ845345-1|ABI33104.1| 1541|Homo sapiens PAX5/ZNF521 fusion prot...    30   1.8  
CR456954-1|CAG33235.1|  235|Homo sapiens HOXC6 protein.                30   1.8  
BC074845-1|AAH74845.1|  235|Homo sapiens homeobox C6 protein.          30   1.8  
BC074844-1|AAH74844.1|  235|Homo sapiens homeobox C6 protein.          30   1.8  

>AY038071-1|AAK93901.1|  562|Homo sapiens aristaless-related
           homeobox protein ARX protein.
          Length = 562

 Score = 86.2 bits (204), Expect = 3e-17
 Identities = 41/49 (83%), Positives = 44/49 (89%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RR RTTFT+YQL ELERAF KT YPDVFTREELAMRL+L+EARVQV
Sbjct: 326 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQV 374


>U12259-1|AAA80574.1|  283|Homo sapiens paired box homeotic protein
           protein.
          Length = 283

 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 36/49 (73%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RRSRTTFT  QL ELERAF++T YPD++TREELA R +L+EARVQV
Sbjct: 21  RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQV 69


>U02368-1|AAC50053.1|  836|Homo sapiens PAX3 protein-forkhead
           transcription factor fusion protein.
          Length = 836

 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 36/49 (73%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RRSRTTFT  QL ELERAF++T YPD++TREELA R +L+EARVQV
Sbjct: 217 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQV 265


>BC114363-1|AAI14364.1|  483|Homo sapiens paired box gene 3
           (Waardenburg syndrome 1) protein.
          Length = 483

 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 36/49 (73%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RRSRTTFT  QL ELERAF++T YPD++TREELA R +L+EARVQV
Sbjct: 216 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQV 264


>BC101302-1|AAI01303.1|  483|Homo sapiens paired box gene 3
           (Waardenburg syndrome 1) protein.
          Length = 483

 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 36/49 (73%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RRSRTTFT  QL ELERAF++T YPD++TREELA R +L+EARVQV
Sbjct: 216 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQV 264


>BC101301-1|AAI01302.1|  484|Homo sapiens paired box gene 3
           (Waardenburg syndrome 1) protein.
          Length = 484

 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 36/49 (73%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RRSRTTFT  QL ELERAF++T YPD++TREELA R +L+EARVQV
Sbjct: 217 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQV 265


>BC101300-1|AAI01301.1|  483|Homo sapiens paired box gene 3
           (Waardenburg syndrome 1) protein.
          Length = 483

 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 36/49 (73%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RRSRTTFT  QL ELERAF++T YPD++TREELA R +L+EARVQV
Sbjct: 216 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQV 264


>BC101299-1|AAI01300.1|  483|Homo sapiens paired box gene 3
           (Waardenburg syndrome 1) protein.
          Length = 483

 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 36/49 (73%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RRSRTTFT  QL ELERAF++T YPD++TREELA R +L+EARVQV
Sbjct: 216 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQV 264


>AY633656-1|AAT47737.1|  850|Homo sapiens PAX3/NCOA1 fusion protein
           protein.
          Length = 850

 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 36/49 (73%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RRSRTTFT  QL ELERAF++T YPD++TREELA R +L+EARVQV
Sbjct: 216 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQV 264


>AY251280-1|AAP13873.1|  407|Homo sapiens paired box 3 splice
           variant PAX3H protein.
          Length = 407

 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 36/49 (73%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RRSRTTFT  QL ELERAF++T YPD++TREELA R +L+EARVQV
Sbjct: 217 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQV 265


>AY251279-1|AAP13872.1|  403|Homo sapiens paired box 3 splice
           variant PAX3G protein.
          Length = 403

 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 36/49 (73%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RRSRTTFT  QL ELERAF++T YPD++TREELA R +L+EARVQV
Sbjct: 217 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQV 265


>AF115392-1|AAD23438.1|  346|Homo sapiens retinal homeobox protein
           RX protein.
          Length = 346

 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 35/49 (71%), Positives = 43/49 (87%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           +K RR+RTTFTTYQLHELERAF+K+ YPDV++REELA ++ L E RVQV
Sbjct: 134 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQV 182


>Z35141-1|CAA84513.1|  467|Homo sapiens PAX7 paired box containing
           transcription factor protein.
          Length = 467

 Score = 77.0 bits (181), Expect = 2e-14
 Identities = 35/49 (71%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RRSRTTFT  QL ELE+AF++T YPD++TREELA R +L+EARVQV
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQV 263


>X96744-2|CAA65522.1|  520|Homo sapiens PAX7 protein.
          Length = 520

 Score = 77.0 bits (181), Expect = 2e-14
 Identities = 35/49 (71%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RRSRTTFT  QL ELE+AF++T YPD++TREELA R +L+EARVQV
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQV 263


>X96744-1|CAA65521.1|  518|Homo sapiens PAX7 protein.
          Length = 518

 Score = 77.0 bits (181), Expect = 2e-14
 Identities = 35/49 (71%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RRSRTTFT  QL ELE+AF++T YPD++TREELA R +L+EARVQV
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQV 261


>X96743-1|CAA65520.1|  520|Homo sapiens paired box containing
           transcription factor protein.
          Length = 520

 Score = 77.0 bits (181), Expect = 2e-14
 Identities = 35/49 (71%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RRSRTTFT  QL ELE+AF++T YPD++TREELA R +L+EARVQV
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQV 263


>DQ322591-1|ABC48797.1|  505|Homo sapiens PAX7 transcriptional
           factor isoform B protein.
          Length = 505

 Score = 77.0 bits (181), Expect = 2e-14
 Identities = 35/49 (71%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RRSRTTFT  QL ELE+AF++T YPD++TREELA R +L+EARVQV
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQV 263


>BC121166-1|AAI21167.1|  518|Homo sapiens paired box gene 7 protein.
          Length = 518

 Score = 77.0 bits (181), Expect = 2e-14
 Identities = 35/49 (71%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RRSRTTFT  QL ELE+AF++T YPD++TREELA R +L+EARVQV
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQV 261


>BC121165-1|AAI21166.1|  518|Homo sapiens paired box gene 7 protein.
          Length = 518

 Score = 77.0 bits (181), Expect = 2e-14
 Identities = 35/49 (71%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RRSRTTFT  QL ELE+AF++T YPD++TREELA R +L+EARVQV
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQV 261


>AL021528-1|CAA16432.1|  520|Homo sapiens paired box gene 7 protein.
          Length = 520

 Score = 77.0 bits (181), Expect = 2e-14
 Identities = 35/49 (71%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RRSRTTFT  QL ELE+AF++T YPD++TREELA R +L+EARVQV
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQV 263


>AJ404888-1|CAC15060.1|  411|Homo sapiens homeodomain transcription
           factor ALX4 protein.
          Length = 411

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 34/48 (70%), Positives = 41/48 (85%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RR+RTTFT+YQL ELE+ F KT YPDV+ RE+LAMR +L+EARVQV
Sbjct: 213 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQV 260


>AJ279074-1|CAC15120.1|  411|Homo sapiens homeodomain transcription
           factor ALX4 protein.
          Length = 411

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 34/48 (70%), Positives = 41/48 (85%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RR+RTTFT+YQL ELE+ F KT YPDV+ RE+LAMR +L+EARVQV
Sbjct: 213 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQV 260


>AF308825-1|AAK38835.1|  411|Homo sapiens aristaless-like homeobox 4
           protein.
          Length = 411

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 34/48 (70%), Positives = 41/48 (85%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RR+RTTFT+YQL ELE+ F KT YPDV+ RE+LAMR +L+EARVQV
Sbjct: 213 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQV 260


>AF294629-1|AAG23961.1|  410|Homo sapiens aristaless-like 4 protein.
          Length = 410

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 34/48 (70%), Positives = 41/48 (85%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RR+RTTFT+YQL ELE+ F KT YPDV+ RE+LAMR +L+EARVQV
Sbjct: 213 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQV 260


>AB058691-1|BAB47417.1|  413|Homo sapiens KIAA1788 protein protein.
          Length = 413

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 34/48 (70%), Positives = 41/48 (85%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RR+RTTFT+YQL ELE+ F KT YPDV+ RE+LAMR +L+EARVQV
Sbjct: 215 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQV 262


>BC032512-1|AAH32512.1|  184|Homo sapiens retina and anterior neural
           fold homeobox like 1 protein.
          Length = 184

 Score = 75.4 bits (177), Expect = 5e-14
 Identities = 33/49 (67%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           +K RR+RTTFTTYQLH+LERAF+ + YPDV++REELA ++ L E RVQV
Sbjct: 25  KKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQV 73


>BC018709-1|AAH18709.1|  184|Homo sapiens retina and anterior neural
           fold homeobox like 1 protein.
          Length = 184

 Score = 75.4 bits (177), Expect = 5e-14
 Identities = 33/49 (67%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           +K RR+RTTFTTYQLH+LERAF+ + YPDV++REELA ++ L E RVQV
Sbjct: 25  KKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQV 73


>BC007284-1|AAH07284.1|  184|Homo sapiens RAXL1 protein protein.
          Length = 184

 Score = 75.4 bits (177), Expect = 5e-14
 Identities = 33/49 (67%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           +K RR+RTTFTTYQLH+LERAF+ + YPDV++REELA ++ L E RVQV
Sbjct: 25  KKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQV 73


>AY211277-1|AAP41547.1|  184|Homo sapiens Q50-type retinal homeobox
           protein.
          Length = 184

 Score = 75.4 bits (177), Expect = 5e-14
 Identities = 33/49 (67%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           +K RR+RTTFTTYQLH+LERAF+ + YPDV++REELA ++ L E RVQV
Sbjct: 25  KKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQV 73


>D82344-1|BAA11555.1|  314|Homo sapiens NBPhox protein.
          Length = 314

 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 33/49 (67%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RR RTTFT+ QL ELER F +T YPD++TREELA++++L+EARVQV
Sbjct: 96  RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQV 144


>BC113428-1|AAI13429.1|  343|Homo sapiens aristaless-like homeobox 3
           protein.
          Length = 343

 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 32/48 (66%), Positives = 41/48 (85%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RR+RTTF+T+QL ELE+ F KT YPDV+ RE+LA+R +L+EARVQV
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQV 199


>BC112007-1|AAI12008.1|  343|Homo sapiens ALX3 protein protein.
          Length = 343

 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 32/48 (66%), Positives = 41/48 (85%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RR+RTTF+T+QL ELE+ F KT YPDV+ RE+LA+R +L+EARVQV
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQV 199


>BC041564-1|AAH41564.1|  284|Homo sapiens paired-like (aristaless)
           homeobox 2a protein.
          Length = 284

 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 33/49 (67%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RR RTTFT+ QL ELER F +T YPD++TREELA++++L+EARVQV
Sbjct: 88  RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQV 136


>BC017199-1|AAH17199.1|  314|Homo sapiens paired-like homeobox 2b
           protein.
          Length = 314

 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 33/49 (67%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RR RTTFT+ QL ELER F +T YPD++TREELA++++L+EARVQV
Sbjct: 96  RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQV 144


>AL160006-1|CAI22714.1|  343|Homo sapiens aristaless-like homeobox 3
           protein.
          Length = 343

 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 32/48 (66%), Positives = 41/48 (85%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RR+RTTF+T+QL ELE+ F KT YPDV+ RE+LA+R +L+EARVQV
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQV 199


>AF117979-1|AAD26698.1|  314|Homo sapiens homeodomain transcription
           factor NBPHOX protein.
          Length = 314

 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 33/49 (67%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RR RTTFT+ QL ELER F +T YPD++TREELA++++L+EARVQV
Sbjct: 96  RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQV 144


>AF022724-1|AAB82744.1|  284|Homo sapiens ARIX homeodomain protein
           protein.
          Length = 284

 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 33/49 (67%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RR RTTFT+ QL ELER F +T YPD++TREELA++++L+EARVQV
Sbjct: 88  RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQV 136


>AF008203-1|AAD01418.1|  343|Homo sapiens homeobox protein protein.
          Length = 343

 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 32/48 (66%), Positives = 41/48 (85%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RR+RTTF+T+QL ELE+ F KT YPDV+ RE+LA+R +L+EARVQV
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQV 199


>AB015671-1|BAA82670.1|  314|Homo sapiens NBPhox protein.
          Length = 314

 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 33/49 (67%), Positives = 42/49 (85%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RR RTTFT+ QL ELER F +T YPD++TREELA++++L+EARVQV
Sbjct: 96  RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQV 144


>BC008829-1|AAH08829.1|  355|Homo sapiens SHOX2 protein protein.
          Length = 355

 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 37/55 (67%), Positives = 42/55 (76%), Gaps = 1/55 (1%)

Query: 53  DAGRPR-KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           D G+ + K RRSRT FT  QL+ELER FD+T YPD F REEL+ RL LSEARVQV
Sbjct: 156 DEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 210


>AJ002368-1|CAA05342.1|  190|Homo sapiens homeobox protein SHOTb
           protein.
          Length = 190

 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 37/55 (67%), Positives = 42/55 (76%), Gaps = 1/55 (1%)

Query: 53  DAGRPR-KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           D G+ + K RRSRT FT  QL+ELER FD+T YPD F REEL+ RL LSEARVQV
Sbjct: 3   DEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 57


>AJ002367-1|CAA05341.1|  251|Homo sapiens homeobox protein SHOTa
           protein.
          Length = 251

 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 37/55 (67%), Positives = 42/55 (76%), Gaps = 1/55 (1%)

Query: 53  DAGRPR-KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           D G+ + K RRSRT FT  QL+ELER FD+T YPD F REEL+ RL LSEARVQV
Sbjct: 52  DEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 106


>AF022654-1|AAC39662.1|  190|Homo sapiens homeodomain protein
           protein.
          Length = 190

 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 37/55 (67%), Positives = 42/55 (76%), Gaps = 1/55 (1%)

Query: 53  DAGRPR-KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           D G+ + K RRSRT FT  QL+ELER FD+T YPD F REEL+ RL LSEARVQV
Sbjct: 3   DEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 57


>U31986-1|AAB08960.1|  326|Homo sapiens Cart-1 protein.
          Length = 326

 Score = 72.1 bits (169), Expect = 5e-13
 Identities = 33/48 (68%), Positives = 39/48 (81%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RR RTTFT+ QL ELE+ F KT YPDV+ RE+LA+R EL+EARVQV
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQV 178


>BC010923-1|AAH10923.1|  326|Homo sapiens cartilage paired-class
           homeoprotein 1 protein.
          Length = 326

 Score = 72.1 bits (169), Expect = 5e-13
 Identities = 33/48 (68%), Positives = 39/48 (81%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RR RTTFT+ QL ELE+ F KT YPDV+ RE+LA+R EL+EARVQV
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQV 178


>AJ558236-1|CAD90155.1|  326|Homo sapiens cartilage paired-class
           homeoprotein 1 protein.
          Length = 326

 Score = 72.1 bits (169), Expect = 5e-13
 Identities = 33/48 (68%), Positives = 39/48 (81%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RR RTTFT+ QL ELE+ F KT YPDV+ RE+LA+R EL+EARVQV
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQV 178


>Y11536-1|CAA72299.1|  292|Homo sapiens SHOXa protein protein.
          Length = 292

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 35/48 (72%), Positives = 38/48 (79%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RRSRT FT  QL+ELER FD+T YPD F REEL+ RL LSEARVQV
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 163


>Y11535-1|CAA72298.1|  225|Homo sapiens SHOXb protein protein.
          Length = 225

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 35/48 (72%), Positives = 38/48 (79%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RRSRT FT  QL+ELER FD+T YPD F REEL+ RL LSEARVQV
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 163


>U89331-1|AAC18820.1|  292|Homo sapiens pseudoautosomal
           homeodomain-containing protein protein.
          Length = 292

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 35/48 (72%), Positives = 38/48 (79%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RRSRT FT  QL+ELER FD+T YPD F REEL+ RL LSEARVQV
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 163


>U02309-1|AAA03628.1|  332|Homo sapiens PAX-3 protein.
          Length = 332

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 35/50 (70%), Positives = 41/50 (82%), Gaps = 1/50 (2%)

Query: 58  RKVRRSRTTFTTYQLHELER-AFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RRSRTTFT  QL ELE  AF++T YPD++TREELA R +L+EARVQV
Sbjct: 69  RKQRRSRTTFTAEQLEELEHVAFERTHYPDIYTREELAQRAKLTEARVQV 118


>U02308-1|AAA03627.1|  689|Homo sapiens protein ( Human PAX-3-FKHR
           gene fusion mRNA, partial cds. ).
          Length = 689

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 35/50 (70%), Positives = 41/50 (82%), Gaps = 1/50 (2%)

Query: 58  RKVRRSRTTFTTYQLHELER-AFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RRSRTTFT  QL ELE  AF++T YPD++TREELA R +L+EARVQV
Sbjct: 69  RKQRRSRTTFTAEQLEELEHVAFERTHYPDIYTREELAQRAKLTEARVQV 118


>BX004827-2|CAI41572.1|  225|Homo sapiens short stature homeobox
           protein.
          Length = 225

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 35/48 (72%), Positives = 38/48 (79%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RRSRT FT  QL+ELER FD+T YPD F REEL+ RL LSEARVQV
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 163


>BX004827-1|CAI41571.1|  292|Homo sapiens short stature homeobox
           protein.
          Length = 292

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 35/48 (72%), Positives = 38/48 (79%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RRSRT FT  QL+ELER FD+T YPD F REEL+ RL LSEARVQV
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 163


>BT007364-1|AAP36028.1|  299|Homo sapiens cone-rod homeobox protein.
          Length = 299

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 33/50 (66%), Positives = 39/50 (78%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           PRK RR RTTFT  QL ELE  F KTQYPDV+ REE+A+++ L E+RVQV
Sbjct: 36  PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQV 85


>BC053672-1|AAH53672.1|  299|Homo sapiens CRX protein protein.
          Length = 299

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 33/50 (66%), Positives = 39/50 (78%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           PRK RR RTTFT  QL ELE  F KTQYPDV+ REE+A+++ L E+RVQV
Sbjct: 36  PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQV 85


>BC016664-1|AAH16664.1|  299|Homo sapiens CRX protein protein.
          Length = 299

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 33/50 (66%), Positives = 39/50 (78%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           PRK RR RTTFT  QL ELE  F KTQYPDV+ REE+A+++ L E+RVQV
Sbjct: 36  PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQV 85


>BC014645-1|AAH14645.1|  253|Homo sapiens paired related homeobox 2
           protein.
          Length = 253

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 34/53 (64%), Positives = 40/53 (75%)

Query: 54  AGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A R +K RR+RTTF + QL  LER F++T YPD F REELA R+ LSEARVQV
Sbjct: 98  AKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQV 150


>AY662674-1|AAV84357.1|  268|Homo sapiens predicted NUP98/PRRX2
           fusion protein protein.
          Length = 268

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 34/53 (64%), Positives = 40/53 (75%)

Query: 54  AGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A R +K RR+RTTF + QL  LER F++T YPD F REELA R+ LSEARVQV
Sbjct: 115 AKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQV 167


>AL590369-7|CAI14511.1|  253|Homo sapiens paired related homeobox 2
           protein.
          Length = 253

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 34/53 (64%), Positives = 40/53 (75%)

Query: 54  AGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A R +K RR+RTTF + QL  LER F++T YPD F REELA R+ LSEARVQV
Sbjct: 98  AKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQV 150


>AF061970-1|AAF17708.1|  253|Homo sapiens paired related homeobox
           protein protein.
          Length = 253

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 34/53 (64%), Positives = 40/53 (75%)

Query: 54  AGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A R +K RR+RTTF + QL  LER F++T YPD F REELA R+ LSEARVQV
Sbjct: 98  AKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQV 150


>AF024711-1|AAB88418.1|  299|Homo sapiens cone rod homeobox protein
           protein.
          Length = 299

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 33/50 (66%), Positives = 39/50 (78%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           PRK RR RTTFT  QL ELE  F KTQYPDV+ REE+A+++ L E+RVQV
Sbjct: 36  PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQV 85


>U81600-1|AAB39864.1|  164|Homo sapiens paired-like homeodomain
           protein PRX2 protein.
          Length = 164

 Score = 70.9 bits (166), Expect = 1e-12
 Identities = 33/51 (64%), Positives = 39/51 (76%)

Query: 56  RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           R +K RR+RTTF + QL  LER F++T YPD F REELA R+ LSEARVQV
Sbjct: 11  RKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQV 61


>BC128153-1|AAI28154.1|  361|Homo sapiens ceh-10 homeodomain
           containing homolog (C. elegans) protein.
          Length = 361

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 32/56 (57%), Positives = 42/56 (75%)

Query: 51  AIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A++  + RK RR RT FT+YQL ELE+AF++  YPDV+ RE LAM+ EL E R+QV
Sbjct: 139 ALNQTKKRKKRRHRTIFTSYQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQV 194


>AY336059-1|AAQ01593.1|  361|Homo sapiens ceh-10 homeodomain
           containing protein protein.
          Length = 361

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 32/56 (57%), Positives = 42/56 (75%)

Query: 51  AIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A++  + RK RR RT FT+YQL ELE+AF++  YPDV+ RE LAM+ EL E R+QV
Sbjct: 139 ALNQTKKRKKRRHRTIFTSYQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQV 194


>AY628411-1|AAT46026.1|  292|Homo sapiens short stature homeobox
           transcript variant SHOXa protein.
          Length = 292

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 34/48 (70%), Positives = 37/48 (77%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RRSRT FT  QL+ELER FD+T YPD F  EEL+ RL LSEARVQV
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMHEELSQRLGLSEARVQV 163


>M95929-1|AAA60085.1|  199|Homo sapiens homeobox protein protein.
          Length = 199

 Score = 68.5 bits (160), Expect = 6e-12
 Identities = 31/51 (60%), Positives = 39/51 (76%)

Query: 56  RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           + RK RR+RTTF + QL  LER F++T YPD F RE+LA R+ L+EARVQV
Sbjct: 72  KKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQV 122


>BC074993-1|AAH74993.1|  245|Homo sapiens paired related homeobox 1
           protein.
          Length = 245

 Score = 68.5 bits (160), Expect = 6e-12
 Identities = 31/51 (60%), Positives = 39/51 (76%)

Query: 56  RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           + RK RR+RTTF + QL  LER F++T YPD F RE+LA R+ L+EARVQV
Sbjct: 90  KKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQV 140


>BC032579-1|AAH32579.1|  297|Homo sapiens orthodenticle homeobox 2
           protein.
          Length = 297

 Score = 68.5 bits (160), Expect = 6e-12
 Identities = 32/53 (60%), Positives = 39/53 (73%)

Query: 54  AGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A  PRK RR RTTFT  QL  LE  F KT+YPD+F REE+A+++ L E+RVQV
Sbjct: 40  AATPRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQV 92


>AF298117-1|AAG16243.1|  297|Homo sapiens homeobox protein OTX2
           protein.
          Length = 297

 Score = 68.5 bits (160), Expect = 6e-12
 Identities = 32/53 (60%), Positives = 39/53 (73%)

Query: 54  AGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A  PRK RR RTTFT  QL  LE  F KT+YPD+F REE+A+++ L E+RVQV
Sbjct: 40  AATPRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQV 92


>BC001800-1|AAH01800.1|  325|Homo sapiens orthopedia homeobox
           protein.
          Length = 325

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 31/49 (63%), Positives = 40/49 (81%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           +K +R RT FT  QL+ELER+F KT YPD+F REELA+R+ L+E+RVQV
Sbjct: 102 QKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQV 150


>BC007621-1|AAH07621.1|  354|Homo sapiens orthodenticle homeobox 1
           protein.
          Length = 354

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 31/50 (62%), Positives = 38/50 (76%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           PRK RR RTTFT  QL  LE  F KT+YPD+F REE+A+++ L E+RVQV
Sbjct: 35  PRKQRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQV 84


>AF093138-1|AAD31385.1|  289|Homo sapiens homeodomain protein OTX2
           protein.
          Length = 289

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 31/50 (62%), Positives = 38/50 (76%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           PRK RR RTTFT  QL  LE  F KT+YPD+F REE+A+++ L E+RVQV
Sbjct: 35  PRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQV 84


>AC009501-2|AAY24357.1|  354|Homo sapiens unknown protein.
          Length = 354

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 31/50 (62%), Positives = 38/50 (76%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           PRK RR RTTFT  QL  LE  F KT+YPD+F REE+A+++ L E+RVQV
Sbjct: 35  PRKQRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQV 84


>BC053599-1|AAH53599.1|  406|Homo sapiens extraembryonic,
           spermatogenesis, homeobox 1 homolog (mouse) protein.
          Length = 406

 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 31/50 (62%), Positives = 36/50 (72%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           P + RR RT FT +QL ELE  FD++QYPDV  RE LA RL L+E RVQV
Sbjct: 136 PERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQV 185


>BC042633-1|AAH42633.1|  406|Homo sapiens extraembryonic,
           spermatogenesis, homeobox 1 homolog (mouse) protein.
          Length = 406

 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 31/50 (62%), Positives = 36/50 (72%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           P + RR RT FT +QL ELE  FD++QYPDV  RE LA RL L+E RVQV
Sbjct: 136 PERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQV 185


>AY114148-1|AAM62141.1|  406|Homo sapiens ESX1L protein.
          Length = 406

 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 31/50 (62%), Positives = 36/50 (72%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           P + RR RT FT +QL ELE  FD++QYPDV  RE LA RL L+E RVQV
Sbjct: 136 PERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQV 185


>AL137797-2|CAI19184.1|  377|Homo sapiens diencephalon/mesencephalon
           homeobox 1 protein.
          Length = 377

 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 35/58 (60%), Positives = 37/58 (63%)

Query: 49  LEAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           LEA    + RK RRSRT FT  QL  LE+ F KT YPDV  RE LAM   L EARVQV
Sbjct: 55  LEARYGSQHRKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQV 112


>AL137797-1|CAI19185.1|  382|Homo sapiens diencephalon/mesencephalon
           homeobox 1 protein.
          Length = 382

 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 35/58 (60%), Positives = 37/58 (63%)

Query: 49  LEAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           LEA    + RK RRSRT FT  QL  LE+ F KT YPDV  RE LAM   L EARVQV
Sbjct: 60  LEARYGSQHRKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQV 117


>AF398528-1|AAM90590.1|  382|Homo sapiens homeoprotein MBX-L
           protein.
          Length = 382

 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 35/58 (60%), Positives = 37/58 (63%)

Query: 49  LEAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           LEA    + RK RRSRT FT  QL  LE+ F KT YPDV  RE LAM   L EARVQV
Sbjct: 60  LEARYGSQHRKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQV 117


>AF398527-1|AAM90589.1|  377|Homo sapiens homeoprotein MBX-S
           protein.
          Length = 377

 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 35/58 (60%), Positives = 37/58 (63%)

Query: 49  LEAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           LEA    + RK RRSRT FT  QL  LE+ F KT YPDV  RE LAM   L EARVQV
Sbjct: 55  LEARYGSQHRKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQV 112


>AB037699-1|BAC00920.1|  382|Homo sapiens PaxB protein.
          Length = 382

 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 35/58 (60%), Positives = 37/58 (63%)

Query: 49  LEAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           LEA    + RK RRSRT FT  QL  LE+ F KT YPDV  RE LAM   L EARVQV
Sbjct: 60  LEARYGSQHRKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQV 117


>Z83853-1|CAI18752.1|  245|Homo sapiens protein ( Human DNA sequence
           from clone SC22CB-109E1 on chromosome 22q12.3. ).
          Length = 245

 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 33/52 (63%), Positives = 37/52 (71%), Gaps = 1/52 (1%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           GR  K RR RTTFTT QLHELE+ F  T YPDV  R +LA R+ L EARVQ+
Sbjct: 78  GRKSK-RRVRTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLPEARVQI 128


>BC113633-1|AAI13634.1|  245|Homo sapiens intestine-specific
           homeobox protein.
          Length = 245

 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 33/52 (63%), Positives = 37/52 (71%), Gaps = 1/52 (1%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           GR  K RR RTTFTT QLHELE+ F  T YPDV  R +LA R+ L EARVQ+
Sbjct: 78  GRKSK-RRVRTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLPEARVQI 128


>BC112212-1|AAI12213.1|  245|Homo sapiens intestine-specific
           homeobox protein.
          Length = 245

 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 33/52 (63%), Positives = 37/52 (71%), Gaps = 1/52 (1%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           GR  K RR RTTFTT QLHELE+ F  T YPDV  R +LA R+ L EARVQ+
Sbjct: 78  GRKSK-RRVRTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLPEARVQI 128


>AL024494-1|CAI19818.1|  245|Homo sapiens protein ( Human DNA
           sequence from clone RP1-215F16 on chromosome
           22q12.1-12.3.).
          Length = 245

 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 33/52 (63%), Positives = 37/52 (71%), Gaps = 1/52 (1%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           GR  K RR RTTFTT QLHELE+ F  T YPDV  R +LA R+ L EARVQ+
Sbjct: 78  GRKSK-RRVRTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLPEARVQI 128


>Z95332-5|CAG38363.1|  436|Homo sapiens paired box gene 6 (aniridia,
           keratitis) protein.
          Length = 436

 Score = 64.5 bits (150), Expect = 9e-11
 Identities = 27/49 (55%), Positives = 39/49 (79%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK++R+RT+FT  Q+  LE+ F++T YPDVF RE LA +++L EAR+QV
Sbjct: 222 RKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 270


>Z95332-4|CAG38362.1|  422|Homo sapiens paired box gene 6 (aniridia,
           keratitis) protein.
          Length = 422

 Score = 64.5 bits (150), Expect = 9e-11
 Identities = 27/49 (55%), Positives = 39/49 (79%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK++R+RT+FT  Q+  LE+ F++T YPDVF RE LA +++L EAR+QV
Sbjct: 208 RKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 256


>Z83307-5|CAG38086.1|  422|Homo sapiens paired box gene 6 (aniridia,
           keratitis) protein.
          Length = 422

 Score = 64.5 bits (150), Expect = 9e-11
 Identities = 27/49 (55%), Positives = 39/49 (79%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK++R+RT+FT  Q+  LE+ F++T YPDVF RE LA +++L EAR+QV
Sbjct: 208 RKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 256


>Z83307-4|CAG38087.1|  436|Homo sapiens paired box gene 6 (aniridia,
           keratitis) protein.
          Length = 436

 Score = 64.5 bits (150), Expect = 9e-11
 Identities = 27/49 (55%), Positives = 39/49 (79%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK++R+RT+FT  Q+  LE+ F++T YPDVF RE LA +++L EAR+QV
Sbjct: 222 RKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 270


>M93650-1|AAA36416.1|  422|Homo sapiens paired-box protein protein.
          Length = 422

 Score = 64.5 bits (150), Expect = 9e-11
 Identities = 27/49 (55%), Positives = 39/49 (79%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK++R+RT+FT  Q+  LE+ F++T YPDVF RE LA +++L EAR+QV
Sbjct: 208 RKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 256


>M77844-2|AAA59963.1|  422|Homo sapiens oculorhombin protein.
          Length = 422

 Score = 64.5 bits (150), Expect = 9e-11
 Identities = 27/49 (55%), Positives = 39/49 (79%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK++R+RT+FT  Q+  LE+ F++T YPDVF RE LA +++L EAR+QV
Sbjct: 208 RKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 256


>M77844-1|AAA59962.1|  422|Homo sapiens oculorhombin protein.
          Length = 422

 Score = 64.5 bits (150), Expect = 9e-11
 Identities = 27/49 (55%), Positives = 39/49 (79%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK++R+RT+FT  Q+  LE+ F++T YPDVF RE LA +++L EAR+QV
Sbjct: 208 RKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 256


>BC011953-1|AAH11953.1|  422|Homo sapiens paired box gene 6
           (aniridia, keratitis) protein.
          Length = 422

 Score = 64.5 bits (150), Expect = 9e-11
 Identities = 27/49 (55%), Positives = 39/49 (79%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK++R+RT+FT  Q+  LE+ F++T YPDVF RE LA +++L EAR+QV
Sbjct: 208 RKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 256


>AY707088-1|AAU12168.1|  422|Homo sapiens paired box gene 6 isoform
           a protein.
          Length = 422

 Score = 64.5 bits (150), Expect = 9e-11
 Identities = 27/49 (55%), Positives = 39/49 (79%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK++R+RT+FT  Q+  LE+ F++T YPDVF RE LA +++L EAR+QV
Sbjct: 208 RKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 256


>AY047583-1|AAK95849.1|  422|Homo sapiens paired box protein PAX6
           protein.
          Length = 422

 Score = 64.5 bits (150), Expect = 9e-11
 Identities = 27/49 (55%), Positives = 39/49 (79%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK++R+RT+FT  Q+  LE+ F++T YPDVF RE LA +++L EAR+QV
Sbjct: 208 RKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 256


>AB209177-1|BAD92414.1|  385|Homo sapiens paired box gene 6 isoform
           a variant protein.
          Length = 385

 Score = 64.5 bits (150), Expect = 9e-11
 Identities = 27/49 (55%), Positives = 39/49 (79%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK++R+RT+FT  Q+  LE+ F++T YPDVF RE LA +++L EAR+QV
Sbjct: 171 RKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 219


>DQ854812-1|ABI23978.1|  301|Homo sapiens visual system homeobox 1
           transcript variant 6 protein.
          Length = 301

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 29/49 (59%), Positives = 36/49 (73%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RR RT FT +QL ELE+AF +  YPDV+ RE LA++ EL E R+QV
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQV 210


>DQ854809-1|ABI23975.1|  280|Homo sapiens visual system homeobox 1
           transcript variant 3 protein.
          Length = 280

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 29/49 (59%), Positives = 36/49 (73%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RR RT FT +QL ELE+AF +  YPDV+ RE LA++ EL E R+QV
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQV 210


>DQ854808-1|ABI23974.1|  239|Homo sapiens visual system homeobox 1
           transcript variant 2 protein.
          Length = 239

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 29/49 (59%), Positives = 36/49 (73%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RR RT FT +QL ELE+AF +  YPDV+ RE LA++ EL E R+QV
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQV 210


>DQ854807-1|ABI23973.1|  365|Homo sapiens visual system homeobox 1
           transcript variant 1 protein.
          Length = 365

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 29/49 (59%), Positives = 36/49 (73%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RR RT FT +QL ELE+AF +  YPDV+ RE LA++ EL E R+QV
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQV 210


>BC126228-1|AAI26229.1|  365|Homo sapiens visual system homeobox 1
           homolog, CHX10-like (zebrafish) protein.
          Length = 365

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 29/49 (59%), Positives = 36/49 (73%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RR RT FT +QL ELE+AF +  YPDV+ RE LA++ EL E R+QV
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQV 210


>BC069076-1|AAH69076.1|  226|Homo sapiens prophet of Pit1,
           paired-like homeodomain transcription factor protein.
          Length = 226

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 30/52 (57%), Positives = 36/52 (69%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           GRP   RR RTTF+  QL +LE AF + QYPD++ RE LA    LSEAR+QV
Sbjct: 64  GRPHSRRRHRTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQV 115


>AL080312-3|CAI18918.1|  365|Homo sapiens visual system homeobox 1
           homolog, CHX10-like (zebrafish) protein.
          Length = 365

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 29/49 (59%), Positives = 36/49 (73%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RR RT FT +QL ELE+AF +  YPDV+ RE LA++ EL E R+QV
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQV 210


>AF251034-1|AAF99657.1|  239|Homo sapiens homeodomain protein RINX,
           S1 isoform protein.
          Length = 239

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 29/49 (59%), Positives = 36/49 (73%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RR RT FT +QL ELE+AF +  YPDV+ RE LA++ EL E R+QV
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQV 210


>AF251033-1|AAF99656.1|  365|Homo sapiens homeodomain protein RINX,
           L1 isoform protein.
          Length = 365

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 29/49 (59%), Positives = 36/49 (73%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RR RT FT +QL ELE+AF +  YPDV+ RE LA++ EL E R+QV
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQV 210


>AF176797-1|AAF37425.2|  365|Homo sapiens transcription factor VSX1
           protein.
          Length = 365

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 29/49 (59%), Positives = 36/49 (73%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK RR RT FT +QL ELE+AF +  YPDV+ RE LA++ EL E R+QV
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQV 210


>AF076215-1|AAC77454.1|  226|Homo sapiens prophet of Pit1 protein.
          Length = 226

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 30/52 (57%), Positives = 36/52 (69%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           GRP   RR RTTF+  QL +LE AF + QYPD++ RE LA    LSEAR+QV
Sbjct: 64  GRPHSRRRHRTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQV 115


>AF076214-1|AAC77453.1|  226|Homo sapiens prophet of Pit1 protein.
          Length = 226

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 30/52 (57%), Positives = 36/52 (69%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           GRP   RR RTTF+  QL +LE AF + QYPD++ RE LA    LSEAR+QV
Sbjct: 64  GRPHSRRRHRTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQV 115


>AF041141-1|AAC27900.1|  226|Homo sapiens pituitary specific
           homeodomain protein protein.
          Length = 226

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 30/52 (57%), Positives = 36/52 (69%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           GRP   RR RTTF+  QL +LE AF + QYPD++ RE LA    LSEAR+QV
Sbjct: 64  GRPHSRRRHRTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQV 115


>DQ854811-1|ABI23977.1|  236|Homo sapiens visual system homeobox 1
           transcript variant 5 protein.
          Length = 236

 Score = 62.5 bits (145), Expect = 4e-10
 Identities = 28/48 (58%), Positives = 35/48 (72%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
           RK RR RT FT +QL ELE+AF +  YPDV+ RE LA++ EL E R+Q
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209


>DQ854810-1|ABI23976.1|  218|Homo sapiens visual system homeobox 1
           transcript variant 4 protein.
          Length = 218

 Score = 62.5 bits (145), Expect = 4e-10
 Identities = 28/48 (58%), Positives = 35/48 (72%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
           RK RR RT FT +QL ELE+AF +  YPDV+ RE LA++ EL E R+Q
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209


>BC106010-1|AAI06011.1|  271|Homo sapiens paired-like homeodomain
           transcription factor 2 protein.
          Length = 271

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 28/56 (50%), Positives = 39/56 (69%)

Query: 51  AIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A D  + ++ RR RT FT+ QL ELE  F + +YPD+ TREE+A+   L+EARV+V
Sbjct: 30  AEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRV 85


>BC013998-1|AAH13998.1|  324|Homo sapiens paired-like homeodomain
           transcription factor 2 protein.
          Length = 324

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 28/56 (50%), Positives = 39/56 (69%)

Query: 51  AIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A D  + ++ RR RT FT+ QL ELE  F + +YPD+ TREE+A+   L+EARV+V
Sbjct: 83  AEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRV 138


>AF238048-1|AAK15048.1|  271|Homo sapiens paired-like homeodomain
           transcription factor 2 protein.
          Length = 271

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 28/56 (50%), Positives = 39/56 (69%)

Query: 51  AIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A D  + ++ RR RT FT+ QL ELE  F + +YPD+ TREE+A+   L+EARV+V
Sbjct: 30  AEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRV 85


>AF048722-1|AAC39718.1|  324|Homo sapiens ALL1 responsive protein
           ARP1c protein.
          Length = 324

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 28/56 (50%), Positives = 39/56 (69%)

Query: 51  AIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A D  + ++ RR RT FT+ QL ELE  F + +YPD+ TREE+A+   L+EARV+V
Sbjct: 83  AEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRV 138


>AF048721-1|AAC39717.1|  317|Homo sapiens ALL1 responsive protein
           ARP1b protein.
          Length = 317

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 28/56 (50%), Positives = 39/56 (69%)

Query: 51  AIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A D  + ++ RR RT FT+ QL ELE  F + +YPD+ TREE+A+   L+EARV+V
Sbjct: 76  AEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRV 131


>AF048720-1|AAC39716.1|  271|Homo sapiens ALL1 responsive protein
           ARP1a protein.
          Length = 271

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 28/56 (50%), Positives = 39/56 (69%)

Query: 51  AIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A D  + ++ RR RT FT+ QL ELE  F + +YPD+ TREE+A+   L+EARV+V
Sbjct: 30  AEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRV 85


>BC011642-1|AAH11642.1|  302|Homo sapiens paired-like homeodomain
           transcription factor 3 protein.
          Length = 302

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 28/54 (51%), Positives = 37/54 (68%)

Query: 53  DAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           D    +K RR RT FT+ QL ELE  F + +YPD+ TREE+A+   L+EARV+V
Sbjct: 55  DGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRV 108


>AL160011-2|CAH71624.1|  302|Homo sapiens paired-like homeodomain
           transcription factor 3 protein.
          Length = 302

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 28/54 (51%), Positives = 37/54 (68%)

Query: 53  DAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           D    +K RR RT FT+ QL ELE  F + +YPD+ TREE+A+   L+EARV+V
Sbjct: 55  DGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRV 108


>AF041339-1|AAC24502.1|  302|Homo sapiens homeodomain protein
           protein.
          Length = 302

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 28/54 (51%), Positives = 37/54 (68%)

Query: 53  DAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           D    +K RR RT FT+ QL ELE  F + +YPD+ TREE+A+   L+EARV+V
Sbjct: 55  DGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRV 108


>U69961-1|AAC16257.1|  271|Homo sapiens solurshin protein.
          Length = 271

 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 27/56 (48%), Positives = 39/56 (69%)

Query: 51  AIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A D  + ++ RR RT FT+ QL +LE  F + +YPD+ TREE+A+   L+EARV+V
Sbjct: 30  AEDPSKKKRQRRQRTHFTSQQLQQLEATFQRNRYPDMSTREEIAVWTNLTEARVRV 85


>U96402-1|AAC39544.1|  205|Homo sapiens GSC-2 protein.
          Length = 205

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 29/56 (51%), Positives = 35/56 (62%)

Query: 51  AIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A+  G  R+ RR RT F+  QL  LE  F + QYPDV TRE LA R+ L E RV+V
Sbjct: 117 AVGPGSQRRTRRHRTIFSEEQLQALEALFVQNQYPDVSTRERLAGRIRLREERVEV 172


>U70370-1|AAC51126.1|  314|Homo sapiens hindlimb expressed homeobox
           protein backfoot protein.
          Length = 314

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 27/56 (48%), Positives = 37/56 (66%)

Query: 51  AIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A D  + +K RR RT FT+ QL ELE  F + +YPD+  REE+A+   L+E RV+V
Sbjct: 80  ADDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRV 135


>BC009412-1|AAH09412.1|  314|Homo sapiens paired-like homeodomain
           transcription factor 1 protein.
          Length = 314

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 27/56 (48%), Positives = 37/56 (66%)

Query: 51  AIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A D  + +K RR RT FT+ QL ELE  F + +YPD+  REE+A+   L+E RV+V
Sbjct: 80  ADDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRV 135


>BC003685-1|AAH03685.1|  314|Homo sapiens PITX1 protein protein.
          Length = 314

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 27/56 (48%), Positives = 37/56 (66%)

Query: 51  AIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A D  + +K RR RT FT+ QL ELE  F + +YPD+  REE+A+   L+E RV+V
Sbjct: 80  ADDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRV 135


>AF009650-1|AAB65251.1|  314|Homo sapiens paired-like homeodomain
           transcription factor protein.
          Length = 314

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 27/56 (48%), Positives = 37/56 (66%)

Query: 51  AIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A D  + +K RR RT FT+ QL ELE  F + +YPD+  REE+A+   L+E RV+V
Sbjct: 80  ADDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRV 135


>BC063580-1|AAH63580.1|  257|Homo sapiens goosecoid protein.
          Length = 257

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 27/59 (45%), Positives = 39/59 (66%)

Query: 48  QLEAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           +L+ ++    R+ RR RT FT  QL  LE  F +T+YPDV TRE+LA ++ L E +V+V
Sbjct: 148 ELQLLNQLHCRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEV 206


>AY177407-1|AAO18645.1|  257|Homo sapiens homeobox protein goosecoid
           protein.
          Length = 257

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 27/59 (45%), Positives = 39/59 (66%)

Query: 48  QLEAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           +L+ ++    R+ RR RT FT  QL  LE  F +T+YPDV TRE+LA ++ L E +V+V
Sbjct: 148 ELQLLNQLHCRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEV 206


>BC028970-1|AAH28970.1|  287|Homo sapiens distal-less homeobox 3
           protein.
          Length = 287

 Score = 51.6 bits (118), Expect = 7e-07
 Identities = 23/52 (44%), Positives = 37/52 (71%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           G+P+KVR+ RT +++YQL  L+R F K QY  +  R ELA +L L++ +V++
Sbjct: 124 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKI 175


>BC012361-1|AAH12361.1|  287|Homo sapiens distal-less homeobox 3
           protein.
          Length = 287

 Score = 51.6 bits (118), Expect = 7e-07
 Identities = 23/52 (44%), Positives = 37/52 (71%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           G+P+KVR+ RT +++YQL  L+R F K QY  +  R ELA +L L++ +V++
Sbjct: 124 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKI 175


>AF452638-2|AAL99504.1|  287|Homo sapiens distal-less homeo box 3
           protein.
          Length = 287

 Score = 51.6 bits (118), Expect = 7e-07
 Identities = 23/52 (44%), Positives = 37/52 (71%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           G+P+KVR+ RT +++YQL  L+R F K QY  +  R ELA +L L++ +V++
Sbjct: 124 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKI 175


>AF028233-1|AAC14397.1|  287|Homo sapiens distal-less homeobox
           protein protein.
          Length = 287

 Score = 51.6 bits (118), Expect = 7e-07
 Identities = 23/52 (44%), Positives = 37/52 (71%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           G+P+KVR+ RT +++YQL  L+R F K QY  +  R ELA +L L++ +V++
Sbjct: 124 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKI 175


>U51003-1|AAB40902.1|  328|Homo sapiens DLX-2 protein.
          Length = 328

 Score = 51.2 bits (117), Expect = 9e-07
 Identities = 23/52 (44%), Positives = 37/52 (71%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           G+P+KVR+ RT ++++QL  L+R F KTQY  +  R ELA  L L++ +V++
Sbjct: 147 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKI 198


>L07919-1|AAA19663.1|  244|Homo sapiens homeodomain protein DLX-2
           protein.
          Length = 244

 Score = 51.2 bits (117), Expect = 9e-07
 Identities = 23/52 (44%), Positives = 37/52 (71%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           G+P+KVR+ RT ++++QL  L+R F KTQY  +  R ELA  L L++ +V++
Sbjct: 63  GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKI 114


>BT006903-1|AAP35549.1|  289|Homo sapiens distal-less homeo box 5
           protein.
          Length = 289

 Score = 51.2 bits (117), Expect = 9e-07
 Identities = 23/52 (44%), Positives = 37/52 (71%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           G+P+KVR+ RT ++++QL  L+R F KTQY  +  R ELA  L L++ +V++
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKI 183


>BC032558-1|AAH32558.1|  328|Homo sapiens distal-less homeobox 2
           protein.
          Length = 328

 Score = 51.2 bits (117), Expect = 9e-07
 Identities = 23/52 (44%), Positives = 37/52 (71%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           G+P+KVR+ RT ++++QL  L+R F KTQY  +  R ELA  L L++ +V++
Sbjct: 147 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKI 198


>BC006226-1|AAH06226.1|  289|Homo sapiens distal-less homeobox 5
           protein.
          Length = 289

 Score = 51.2 bits (117), Expect = 9e-07
 Identities = 23/52 (44%), Positives = 37/52 (71%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           G+P+KVR+ RT ++++QL  L+R F KTQY  +  R ELA  L L++ +V++
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKI 183


>AK023493-1|BAB14587.1|  289|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13431 fis, clone PLACE1002532, highly similar to
           HOMEOBOX PROTEIN DLX-5. ).
          Length = 289

 Score = 51.2 bits (117), Expect = 9e-07
 Identities = 23/52 (44%), Positives = 37/52 (71%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           G+P+KVR+ RT ++++QL  L+R F KTQY  +  R ELA  L L++ +V++
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKI 183


>AC104801-1|AAY14956.1|  328|Homo sapiens unknown protein.
          Length = 328

 Score = 51.2 bits (117), Expect = 9e-07
 Identities = 23/52 (44%), Positives = 37/52 (71%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           G+P+KVR+ RT ++++QL  L+R F KTQY  +  R ELA  L L++ +V++
Sbjct: 147 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKI 198


>AC004774-2|AAC17833.1|  289|Homo sapiens unknown protein.
          Length = 289

 Score = 51.2 bits (117), Expect = 9e-07
 Identities = 23/52 (44%), Positives = 37/52 (71%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           G+P+KVR+ RT ++++QL  L+R F KTQY  +  R ELA  L L++ +V++
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKI 183


>BC103858-1|AAI03859.1|  184|Homo sapiens paired-like homeobox
           protein OTEX protein.
          Length = 184

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 2/58 (3%)

Query: 51  AIDAGRPRKV--RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A++  +P  +  R  RT FT  Q+ ELE  F  TQYPDV TR ELA  L ++E +V+V
Sbjct: 92  AMEGPQPENMQPRTRRTKFTLLQVEELESVFRHTQYPDVPTRRELAENLGVTEDKVRV 149


>BC103857-1|AAI03858.1|  184|Homo sapiens paired-like homeobox
           protein OTEX protein.
          Length = 184

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 2/58 (3%)

Query: 51  AIDAGRPRKV--RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A++  +P  +  R  RT FT  Q+ ELE  F  TQYPDV TR ELA  L ++E +V+V
Sbjct: 92  AMEGPQPENMQPRTRRTKFTLLQVEELESVFRHTQYPDVPTRRELAENLGVTEDKVRV 149


>BC069529-1|AAH69529.1|  184|Homo sapiens paired-like homeobox
           protein OTEX protein.
          Length = 184

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 2/58 (3%)

Query: 51  AIDAGRPRKV--RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A++  +P  +  R  RT FT  Q+ ELE  F  TQYPDV TR ELA  L ++E +V+V
Sbjct: 92  AMEGPQPENMQPRTRRTKFTLLQVEELESVFRHTQYPDVPTRRELAENLGVTEDKVRV 149


>BC069324-1|AAH69324.1|  184|Homo sapiens paired-like homeobox
           protein OTEX protein.
          Length = 184

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 2/58 (3%)

Query: 51  AIDAGRPRKV--RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A++  +P  +  R  RT FT  Q+ ELE  F  TQYPDV TR ELA  L ++E +V+V
Sbjct: 92  AMEGPQPENMQPRTRRTKFTLLQVEELESVFRHTQYPDVPTRRELAENLGVTEDKVRV 149


>AY099086-1|AAM22794.1|  184|Homo sapiens paired-like homeobox
           protein OTEX protein.
          Length = 184

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 2/58 (3%)

Query: 51  AIDAGRPRKV--RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A++  +P  +  R  RT FT  Q+ ELE  F  TQYPDV TR ELA  L ++E +V+V
Sbjct: 92  AMEGPQPENMQPRTRRTKFTLLQVEELESVFRHTQYPDVPTRRELAENLGVTEDKVRV 149


>AB208823-1|BAD92060.1|  234|Homo sapiens distal-less homeo box 2
           variant protein.
          Length = 234

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 23/50 (46%), Positives = 35/50 (70%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARV 104
           G+P+KVR+ RT ++++QL  L+R F KTQY  +  R ELA  L L++ +V
Sbjct: 164 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQV 213


>BC113441-1|AAI13442.1|  232|Homo sapiens Mix1 homeobox-like 1
           (Xenopus laevis) protein.
          Length = 232

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 23/46 (50%), Positives = 30/46 (65%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR RT+F+  QL  LE  F +T+YPD+  RE LA    L E+R+QV
Sbjct: 87  RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQV 132


>BC111974-1|AAI11975.1|  232|Homo sapiens Mix-like homeobox protein
           1 protein.
          Length = 232

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 23/46 (50%), Positives = 30/46 (65%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR RT+F+  QL  LE  F +T+YPD+  RE LA    L E+R+QV
Sbjct: 87  RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQV 132


>AL592045-3|CAH71924.1|  232|Homo sapiens Mix1 homeobox-like 1
           (Xenopus laevis) protein.
          Length = 232

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 23/46 (50%), Positives = 30/46 (65%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR RT+F+  QL  LE  F +T+YPD+  RE LA    L E+R+QV
Sbjct: 87  RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQV 132


>AF284337-1|AAG14458.1|  221|Homo sapiens SEBOX protein.
          Length = 221

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 26/46 (56%), Positives = 30/46 (65%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR RTTF+  QL ELERAF    YP++ T E LA    L EA+VQV
Sbjct: 51  RRKRTTFSKGQLLELERAFAAWPYPNISTHEHLAWVTCLPEAKVQV 96


>AF218357-1|AAK01479.1|  232|Homo sapiens homeodomain protein MIX
           protein.
          Length = 232

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 23/46 (50%), Positives = 30/46 (65%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR RT+F+  QL  LE  F +T+YPD+  RE LA    L E+R+QV
Sbjct: 87  RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQV 132


>AF211891-1|AAG35776.1|  232|Homo sapiens Mix.1 homeobox-like
           protein protein.
          Length = 232

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 23/46 (50%), Positives = 30/46 (65%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR RT+F+  QL  LE  F +T+YPD+  RE LA    L E+R+QV
Sbjct: 87  RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQV 132


>AC005023-1|AAC78617.1|  148|Homo sapiens WUGSC:H_GS421I03.1
           protein.
          Length = 148

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 2/57 (3%)

Query: 51  AIDAGRPRKV--RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
           A++  +P  +  R  RT FT  Q+ ELE  F  TQYPDV TR ELA  L ++E +V+
Sbjct: 92  AMEGPQPENMQPRTRRTKFTLLQVEELESVFRHTQYPDVPTRRELAENLGVTEDKVR 148


>AJ001481-1|CAA04776.1|  170|Homo sapiens DUX1 protein.
          Length = 170

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 23/50 (46%), Positives = 31/50 (62%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           P+K RR RT  T  Q   L RAF+K ++P +  REELA    L E+R+Q+
Sbjct: 91  PQKGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQI 140



 Score = 35.9 bits (79), Expect = 0.037
 Identities = 17/46 (36%), Positives = 25/46 (54%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR     T  Q   L   F++  YP + T+EELA  +++ E RVQ+
Sbjct: 20  RRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPEPRVQI 65


>AF133131-2|AAD33598.1|  170|Homo sapiens homeobox protein DUX5
           protein.
          Length = 170

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 23/50 (46%), Positives = 31/50 (62%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           P+K RR RT  T  Q   L RAF+K ++P +  REELA    L E+R+Q+
Sbjct: 91  PQKGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQI 140



 Score = 35.9 bits (79), Expect = 0.037
 Identities = 17/46 (36%), Positives = 25/46 (54%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR     T  Q   L   F++  YP + T+EELA  +++ E RVQ+
Sbjct: 20  RRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPEPRVQI 65


>AF133131-1|AAL02243.1|  197|Homo sapiens homeobox protein DUX3
           protein.
          Length = 197

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 23/50 (46%), Positives = 31/50 (62%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           P+K RR RT  T  Q   L RAF+K ++P +  REELA    L E+R+Q+
Sbjct: 118 PQKGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQI 167



 Score = 35.9 bits (79), Expect = 0.037
 Identities = 17/46 (36%), Positives = 25/46 (54%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR     T  Q   L   F++  YP + T+EELA  +++ E RVQ+
Sbjct: 47  RRMILLSTPSQSDALRACFERNLYPGIATKEELAQGIDIPEPRVQI 92


>AL354735-5|CAI16566.1|  327|Homo sapiens BarH-like 1 (Drosophila)
           protein.
          Length = 327

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 22/50 (44%), Positives = 35/50 (70%)

Query: 56  RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
           R +K R++RT FT +QL +LER+F++ +Y  V  R ELA  L L++ +V+
Sbjct: 174 RLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVK 223


>AK054797-1|BAB70807.1|  327|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30235 fis, clone BRACE2001973, highly similar to
           BarH-like 1. ).
          Length = 327

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 22/50 (44%), Positives = 35/50 (70%)

Query: 56  RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
           R +K R++RT FT +QL +LER+F++ +Y  V  R ELA  L L++ +V+
Sbjct: 174 RLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVK 223


>AJ237816-1|CAB92439.1|  171|Homo sapiens BARHL1 protein protein.
          Length = 171

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 22/50 (44%), Positives = 35/50 (70%)

Query: 56  RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
           R +K R++RT FT +QL +LER+F++ +Y  V  R ELA  L L++ +V+
Sbjct: 18  RLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVK 67


>AF321618-1|AAK52674.1|  327|Homo sapiens BARHL1 protein.
          Length = 327

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 22/50 (44%), Positives = 35/50 (70%)

Query: 56  RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
           R +K R++RT FT +QL +LER+F++ +Y  V  R ELA  L L++ +V+
Sbjct: 174 RLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVK 223


>BC126441-1|AAI26442.1|  387|Homo sapiens BarH-like 2 (Drosophila)
           protein.
          Length = 387

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 20/50 (40%), Positives = 36/50 (72%)

Query: 56  RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
           R +K R++RT F+ +QL++LER+F++ +Y  V  R +LA  L L++ +V+
Sbjct: 228 RAKKPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVK 277


>BC126439-1|AAI26440.1|  387|Homo sapiens BarH-like 2 (Drosophila)
           protein.
          Length = 387

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 20/50 (40%), Positives = 36/50 (72%)

Query: 56  RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
           R +K R++RT F+ +QL++LER+F++ +Y  V  R +LA  L L++ +V+
Sbjct: 228 RAKKPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVK 277


>AY338397-1|AAQ01189.1|  387|Homo sapiens BARH-like 2 protein
           protein.
          Length = 387

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 20/50 (40%), Positives = 36/50 (72%)

Query: 56  RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
           R +K R++RT F+ +QL++LER+F++ +Y  V  R +LA  L L++ +V+
Sbjct: 228 RAKKPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVK 277


>AF133130-2|AAD33597.1|  170|Homo sapiens homeobox protein DUX3
           protein.
          Length = 170

 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 23/50 (46%), Positives = 31/50 (62%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           P+K RR RT  T  Q   L RAF+K ++P +  REELA    L E+R+Q+
Sbjct: 91  PQKGRRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQL 140



 Score = 34.7 bits (76), Expect = 0.085
 Identities = 16/46 (34%), Positives = 25/46 (54%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR     T  Q   L   F++  YP + T+E+LA  +++ E RVQ+
Sbjct: 20  RRMILLSTPSQSDALRACFERNLYPGIATKEQLAQGIDIPEPRVQI 65


>AF133130-1|AAL02242.1|  197|Homo sapiens homeobox protein DUX3
           protein.
          Length = 197

 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 23/50 (46%), Positives = 31/50 (62%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           P+K RR RT  T  Q   L RAF+K ++P +  REELA    L E+R+Q+
Sbjct: 118 PQKGRRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQL 167



 Score = 34.7 bits (76), Expect = 0.085
 Identities = 16/46 (34%), Positives = 25/46 (54%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR     T  Q   L   F++  YP + T+E+LA  +++ E RVQ+
Sbjct: 47  RRMILLSTPSQSDALRACFERNLYPGIATKEQLAQGIDIPEPRVQI 92


>Y17791-1|CAB56166.1|  290|Homo sapiens VAX2 protein protein.
          Length = 290

 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 3/57 (5%)

Query: 50  EAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           + +D  RP+   R+RT+FT  QL+ LE  F + QY     R ELA +L LSE +V+V
Sbjct: 95  KGLDLDRPK---RTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKV 148


>U82811-1|AAB88275.1|  185|Homo sapiens HANF protein.
          Length = 185

 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 21/46 (45%), Positives = 27/46 (58%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR RT FT  Q+  LE  F    YP +  RE+LA +L L E R+Q+
Sbjct: 109 RRPRTAFTQNQIEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQI 154


>U65437-1|AAB39561.1|   79|Homo sapiens homeodomain-containing
           protein protein.
          Length = 79

 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 21/46 (45%), Positives = 27/46 (58%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR RT FT  Q+  LE  F    YP +  RE+LA +L L E R+Q+
Sbjct: 3   RRPRTAFTQNQIEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQI 48


>BT007035-1|AAP35683.1|  290|Homo sapiens ventral anterior homeobox
           2 protein.
          Length = 290

 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 3/57 (5%)

Query: 50  EAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           + +D  RP+   R+RT+FT  QL+ LE  F + QY     R ELA +L LSE +V+V
Sbjct: 95  KGLDLDRPK---RTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKV 148


>BC112089-1|AAI12090.1|  185|Homo sapiens HESX homeobox 1 protein.
          Length = 185

 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 21/46 (45%), Positives = 27/46 (58%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR RT FT  Q+  LE  F    YP +  RE+LA +L L E R+Q+
Sbjct: 109 RRPRTAFTQNQIEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQI 154


>BC093979-1|AAH93979.1|  185|Homo sapiens HESX homeobox 1 protein.
          Length = 185

 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 21/46 (45%), Positives = 27/46 (58%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR RT FT  Q+  LE  F    YP +  RE+LA +L L E R+Q+
Sbjct: 109 RRPRTAFTQNQIEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQI 154


>BC069515-1|AAH69515.1|  185|Homo sapiens HESX homeobox 1 protein.
          Length = 185

 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 21/46 (45%), Positives = 27/46 (58%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR RT FT  Q+  LE  F    YP +  RE+LA +L L E R+Q+
Sbjct: 109 RRPRTAFTQNQIEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQI 154


>BC006336-1|AAH06336.1|  290|Homo sapiens ventral anterior homeobox
           2 protein.
          Length = 290

 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 3/57 (5%)

Query: 50  EAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           + +D  RP+   R+RT+FT  QL+ LE  F + QY     R ELA +L LSE +V+V
Sbjct: 95  KGLDLDRPK---RTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKV 148


>AL731557-2|CAI14825.1|  334|Homo sapiens ventral anterior homeobox
           1 protein.
          Length = 334

 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 3/57 (5%)

Query: 50  EAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           + +D  RP+   R+RT+FT  QL+ LE  F + QY     R ELA +L LSE +V+V
Sbjct: 93  KGLDLDRPK---RTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKV 146


>AF059734-1|AAC24523.1|  185|Homo sapiens homeodomain transcription
           factor protein.
          Length = 185

 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 21/46 (45%), Positives = 27/46 (58%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR RT FT  Q+  LE  F    YP +  RE+LA +L L E R+Q+
Sbjct: 109 RRPRTAFTQNQIEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQI 154


>X90828-1|CAA62342.1|  280|Homo sapiens Lbx1 transcription factor
           protein.
          Length = 280

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 20/48 (41%), Positives = 33/48 (68%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARV 104
           P+K R+SRT FT +Q++ELE+ F   +Y     R+++A +L L+ A+V
Sbjct: 121 PKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQV 168


>BC069156-1|AAH69156.1|  281|Homo sapiens ladybird homeobox 1
           protein.
          Length = 281

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 20/48 (41%), Positives = 33/48 (68%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARV 104
           P+K R+SRT FT +Q++ELE+ F   +Y     R+++A +L L+ A+V
Sbjct: 122 PKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQV 169


>AL135794-1|CAH72508.2|  281|Homo sapiens Ladybird homeobox homolog
           1 (Drosophila) protein.
          Length = 281

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 20/48 (41%), Positives = 33/48 (68%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARV 104
           P+K R+SRT FT +Q++ELE+ F   +Y     R+++A +L L+ A+V
Sbjct: 122 PKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQV 169


>X68879-1|CAA48750.1|  153|Homo sapiens EMX1 protein.
          Length = 153

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 24/49 (48%), Positives = 31/49 (63%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK +R RT F+  QL  LERAF+K  Y     R++LA  L LSE +V+V
Sbjct: 53  RKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKV 101


>U18977-1|AAA87408.1|  135|Homo sapiens protein ( Human D4S2463
           homeobox-like gene, partial cds. ).
          Length = 135

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 22/50 (44%), Positives = 30/50 (60%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           P + RR RT  T  Q   L RAF+K ++P +  REELA    L E+R+Q+
Sbjct: 73  PPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQI 122



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 18/46 (39%), Positives = 25/46 (54%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR R  +T  Q   L   F++  YP + TRE LA  + + E RVQ+
Sbjct: 2   RRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQI 47


>D38024-1|BAA07227.1|  853|Homo sapiens facioscapulohumeral muscular
           dystrophy protein.
          Length = 853

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 22/50 (44%), Positives = 30/50 (60%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           P + RR RT  T  Q   L RAF+K ++P +  REELA    L E+R+Q+
Sbjct: 553 PPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQI 602



 Score = 39.1 bits (87), Expect = 0.004
 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 5/57 (8%)

Query: 50  EAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           EA   GRPR     R  +T  Q   L   F++  YP + TRE LA  + + E RVQ+
Sbjct: 476 EARGRGRPR-----RLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQI 527


>BC045762-1|AAH45762.2|  290|Homo sapiens empty spiracles homeobox 1
           protein.
          Length = 290

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 24/49 (48%), Positives = 31/49 (63%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK +R RT F+  QL  LERAF+K  Y     R++LA  L LSE +V+V
Sbjct: 190 RKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKV 238


>BC037242-1|AAH37242.1|  119|Homo sapiens empty spiracles homeobox 1
           protein.
          Length = 119

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 24/49 (48%), Positives = 31/49 (63%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK +R RT F+  QL  LERAF+K  Y     R++LA  L LSE +V+V
Sbjct: 19  RKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKV 67


>AY500824-1|AAS15569.1|  374|Homo sapiens double homeobox 4c
           protein.
          Length = 374

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 22/50 (44%), Positives = 30/50 (60%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           P + RR RT  T  Q   L RAF+K ++P +  REELA    L E+R+Q+
Sbjct: 91  PPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQI 140



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 18/46 (39%), Positives = 25/46 (54%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR R  +T  Q   L   F++  YP + TRE LA  + + E RVQ+
Sbjct: 20  RRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQI 65


>AY257976-1|AAO91939.1|  255|Homo sapiens transcription factor DLX1
           protein.
          Length = 255

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 20/52 (38%), Positives = 34/52 (65%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           G+ +K+R+ RT +++ QL  L R F +TQY  +  R ELA  L L++ +V++
Sbjct: 123 GKGKKIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKI 174


>AY044051-1|AAK91509.1|  424|Homo sapiens double homeobox protein
           DUX10 protein.
          Length = 424

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 22/50 (44%), Positives = 30/50 (60%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           P + RR RT  T  Q   L RAF+K ++P +  REELA    L E+R+Q+
Sbjct: 91  PPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQI 140



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 18/46 (39%), Positives = 25/46 (54%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR R  +T  Q   L   F++  YP + TRE LA  + + E RVQ+
Sbjct: 20  RRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQI 65


>AF117653-2|AAD54068.2|  424|Homo sapiens double homeobox protein
           protein.
          Length = 424

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 22/50 (44%), Positives = 30/50 (60%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           P + RR RT  T  Q   L RAF+K ++P +  REELA    L E+R+Q+
Sbjct: 91  PPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQI 140



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 18/46 (39%), Positives = 25/46 (54%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR R  +T  Q   L   F++  YP + TRE LA  + + E RVQ+
Sbjct: 20  RRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQI 65


>AF117653-1|AAD54067.2|  424|Homo sapiens double homeobox protein
           protein.
          Length = 424

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 22/50 (44%), Positives = 30/50 (60%)

Query: 57  PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           P + RR RT  T  Q   L RAF+K ++P +  REELA    L E+R+Q+
Sbjct: 91  PPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQI 140



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 18/46 (39%), Positives = 25/46 (54%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR R  +T  Q   L   F++  YP + TRE LA  + + E RVQ+
Sbjct: 20  RRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQI 65


>AC015976-2|AAY14732.1|  235|Homo sapiens unknown protein.
          Length = 235

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 20/52 (38%), Positives = 34/52 (65%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           G+ +K+R+ RT +++ QL  L R F +TQY  +  R ELA  L L++ +V++
Sbjct: 103 GKGKKIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKI 154


>AC012366-2|AAY14744.1|  257|Homo sapiens unknown protein.
          Length = 257

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 24/49 (48%), Positives = 31/49 (63%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK +R RT F+  QL  LERAF+K  Y     R++LA  L LSE +V+V
Sbjct: 157 RKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKV 205


>BC064363-1|AAH64363.1|  254|Homo sapiens BARX1 protein protein.
          Length = 254

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 4/62 (6%)

Query: 48  QLEAIDAGRP----RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEAR 103
           +LEA   G P    +K RRSRT FT  QL  LE+ F+K +Y     R +LA  L LS+ +
Sbjct: 126 KLEAAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQ 185

Query: 104 VQ 105
           V+
Sbjct: 186 VK 187


>BC036189-1|AAH36189.2|  255|Homo sapiens distal-less homeobox 1
           protein.
          Length = 255

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 20/52 (38%), Positives = 33/52 (63%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           G+ +K+R+ RT + + QL  L R F +TQY  +  R ELA  L L++ +V++
Sbjct: 123 GKGKKIRKPRTIYCSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKI 174


>AL357073-1|CAH71535.1|  225|Homo sapiens BarH-like homeobox 1
           protein.
          Length = 225

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 4/62 (6%)

Query: 48  QLEAIDAGRP----RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEAR 103
           +LEA   G P    +K RRSRT FT  QL  LE+ F+K +Y     R +LA  L LS+ +
Sbjct: 97  KLEAAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQ 156

Query: 104 VQ 105
           V+
Sbjct: 157 VK 158


>AF213356-1|AAG23738.1|  225|Homo sapiens homeobox transcription
           factor BARX1 protein.
          Length = 225

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 4/62 (6%)

Query: 48  QLEAIDAGRP----RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEAR 103
           +LEA   G P    +K RRSRT FT  QL  LE+ F+K +Y     R +LA  L LS+ +
Sbjct: 97  KLEAAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQ 156

Query: 104 VQ 105
           V+
Sbjct: 157 VK 158


>L32607-2|AAA83547.1|   60|Homo sapiens protein ( Human
           homeobox-like gene. ).
          Length = 60

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 21/46 (45%), Positives = 28/46 (60%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RR RT  T  Q   L RAF+K ++P +  REELA    L E+R+Q+
Sbjct: 2   RRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQI 47


>BC075090-1|AAH75090.1|  304|Homo sapiens GS homeobox 2 protein.
          Length = 304

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 23/54 (42%), Positives = 30/54 (55%)

Query: 53  DAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           DA +    +R RT FT+ QL ELER F    Y     R E+A  L LSE +V++
Sbjct: 195 DASQVPNGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKI 248


>BC075089-1|AAH75089.1|  304|Homo sapiens homeobox protein GSH-2
           protein.
          Length = 304

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 23/54 (42%), Positives = 30/54 (55%)

Query: 53  DAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           DA +    +R RT FT+ QL ELER F    Y     R E+A  L LSE +V++
Sbjct: 195 DASQVPNGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKI 248


>AF439445-1|AAM08285.1|  304|Homo sapiens homeobox protein GSH-2
           protein.
          Length = 304

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 23/54 (42%), Positives = 30/54 (55%)

Query: 53  DAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           DA +    +R RT FT+ QL ELER F    Y     R E+A  L LSE +V++
Sbjct: 195 DASQVPNGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKI 248


>AF306344-1|AAK00880.1|  304|Homo sapiens homeobox protein 2
           protein.
          Length = 304

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 23/54 (42%), Positives = 30/54 (55%)

Query: 53  DAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           DA +    +R RT FT+ QL ELER F    Y     R E+A  L LSE +V++
Sbjct: 195 DASQVPNGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKI 248


>AB028838-1|BAB84822.1|  304|Homo sapiens homeobox protein GSH-2
           protein.
          Length = 304

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 23/54 (42%), Positives = 30/54 (55%)

Query: 53  DAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           DA +    +R RT FT+ QL ELER F    Y     R E+A  L LSE +V++
Sbjct: 195 DASQVPNGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKI 248


>U10492-1|AAA19983.1|  254|Homo sapiens Mox1 protein.
          Length = 254

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K R+ RT FT  QL ELE  F    Y     R E+A+ L+LSE +V+V
Sbjct: 170 KARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKV 217


>L11239-1|AAA36002.1|  139|Homo sapiens homeobox protein protein.
          Length = 139

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 21/48 (43%), Positives = 31/48 (64%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RR RT FT+ QL ELE+ F   +Y  +  R ++A  L+LSE +V++
Sbjct: 36  KSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKI 83


>BC109381-1|AAI09382.1|  175|Homo sapiens DLX6 protein protein.
          Length = 175

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 19/52 (36%), Positives = 33/52 (63%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           G+ +K+R+ RT +++ QL  L   F +TQY  +  R ELA  L L++ +V++
Sbjct: 44  GKGKKIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKI 95


>BC103690-1|AAI03691.1|  175|Homo sapiens DLX6 protein protein.
          Length = 175

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 19/52 (36%), Positives = 33/52 (63%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           G+ +K+R+ RT +++ QL  L   F +TQY  +  R ELA  L L++ +V++
Sbjct: 44  GKGKKIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKI 95


>BC103689-1|AAI03690.1|  175|Homo sapiens DLX6 protein protein.
          Length = 175

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 19/52 (36%), Positives = 33/52 (63%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           G+ +K+R+ RT +++ QL  L   F +TQY  +  R ELA  L L++ +V++
Sbjct: 44  GKGKKIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKI 95


>BC103688-1|AAI03689.1|  175|Homo sapiens DLX6 protein protein.
          Length = 175

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 19/52 (36%), Positives = 33/52 (63%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           G+ +K+R+ RT +++ QL  L   F +TQY  +  R ELA  L L++ +V++
Sbjct: 44  GKGKKIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKI 95


>BC069506-1|AAH69506.1|  254|Homo sapiens mesenchyme homeobox 1
           protein.
          Length = 254

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K R+ RT FT  QL ELE  F    Y     R E+A+ L+LSE +V+V
Sbjct: 170 KARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKV 217


>BC069474-1|AAH69474.1|  254|Homo sapiens mesenchyme homeobox 1
           protein.
          Length = 254

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K R+ RT FT  QL ELE  F    Y     R E+A+ L+LSE +V+V
Sbjct: 170 KARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKV 217


>BC069363-1|AAH69363.1|  175|Homo sapiens DLX6 protein protein.
          Length = 175

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 19/52 (36%), Positives = 33/52 (63%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           G+ +K+R+ RT +++ QL  L   F +TQY  +  R ELA  L L++ +V++
Sbjct: 44  GKGKKIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKI 95


>AC004774-1|AAC17832.1|  175|Homo sapiens unknown protein.
          Length = 175

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 19/52 (36%), Positives = 33/52 (63%)

Query: 55  GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           G+ +K+R+ RT +++ QL  L   F +TQY  +  R ELA  L L++ +V++
Sbjct: 44  GKGKKIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKI 95


>U31468-1|AAC03241.1|  347|Homo sapiens homeobox protein protein.
          Length = 347

 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 21/48 (43%), Positives = 31/48 (64%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RR RT FT+ QL ELE+ F   +Y  +  R ++A  L+LSE +V++
Sbjct: 245 KNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKI 292


>U02080-1|AAA17406.1|  133|Homo sapiens homeobox protein protein.
          Length = 133

 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 21/48 (43%), Positives = 31/48 (64%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RR RT FT+ QL ELE+ F   +Y  +  R ++A  L+LSE +V++
Sbjct: 31  KNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKI 78


>AF118452-1|AAD39907.1|  348|Homo sapiens homeobox protein GBX2
           protein.
          Length = 348

 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 21/48 (43%), Positives = 31/48 (64%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RR RT FT+ QL ELE+ F   +Y  +  R ++A  L+LSE +V++
Sbjct: 246 KNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKI 293


>AC079135-1|AAX93240.1|  348|Homo sapiens unknown protein.
          Length = 348

 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 21/48 (43%), Positives = 31/48 (64%)

Query: 59  KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           K RR RT FT+ QL ELE+ F   +Y  +  R ++A  L+LSE +V++
Sbjct: 246 KNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKI 293


>X68880-1|CAA48751.1|  158|Homo sapiens EMX2 protein.
          Length = 158

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 22/49 (44%), Positives = 30/49 (61%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK +R RT F+  QL  LE AF+K  Y     R++LA  L L+E +V+V
Sbjct: 58  RKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKV 106


>BC101696-1|AAI01697.1|  186|Homo sapiens ventral anterior homeobox
           1 protein.
          Length = 186

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 50  EAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEAR 103
           + +D  RP+   R+RT+FT  QL+ LE  F + QY     R ELA +L LSE +
Sbjct: 93  KGLDLDRPK---RTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 143


>BC101694-1|AAI01695.1|  186|Homo sapiens ventral anterior homeobox
           1 protein.
          Length = 186

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 50  EAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEAR 103
           + +D  RP+   R+RT+FT  QL+ LE  F + QY     R ELA +L LSE +
Sbjct: 93  KGLDLDRPK---RTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 143


>BC040321-1|AAH40321.1|  356|Homo sapiens LIM homeobox 8 protein.
          Length = 356

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 20/54 (37%), Positives = 30/54 (55%)

Query: 53  DAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           D   P+  +R+RT+FT  QL  ++  F +   PD  T ++LA R  LS   +QV
Sbjct: 218 DVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQV 271


>AL731557-1|CAI14824.1|  186|Homo sapiens ventral anterior homeobox
           1 protein.
          Length = 186

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 50  EAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEAR 103
           + +D  RP+   R+RT+FT  QL+ LE  F + QY     R ELA +L LSE +
Sbjct: 93  KGLDLDRPK---RTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 143


>AK127095-1|BAC86826.1|  186|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45152 fis, clone BRAWH3042568, highly  similar
           to Mus musculus ventral anterior homeobox containing
           gene 1 (Vax1). ).
          Length = 186

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 50  EAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEAR 103
           + +D  RP+   R+RT+FT  QL+ LE  F + QY     R ELA +L LSE +
Sbjct: 93  KGLDLDRPK---RTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQ 143


>AK055041-1|BAB70842.1|  252|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30479 fis, clone BRAWH1000168, highly similar to
           Homeotic protein emx2. ).
          Length = 252

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 22/49 (44%), Positives = 30/49 (61%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK +R RT F+  QL  LE AF+K  Y     R++LA  L L+E +V+V
Sbjct: 152 RKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKV 200


>AF301598-1|AAK95496.1|  252|Homo sapiens empty spiracles-like
           protein protein.
          Length = 252

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 22/49 (44%), Positives = 30/49 (61%)

Query: 58  RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           RK +R RT F+  QL  LE AF+K  Y     R++LA  L L+E +V+V
Sbjct: 152 RKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKV 200


>X69295-1|CAA49156.1|  267|Homo sapiens transcription factor
           protein.
          Length = 267

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 20/46 (43%), Positives = 28/46 (60%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           R+ RT FTT QL  LER F + QY  +  R E +  L L+E +V++
Sbjct: 143 RKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKI 188


>S75361-1|AAB33867.1|  267|Homo sapiens Msx-2 homolog protein.
          Length = 267

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 20/46 (43%), Positives = 28/46 (60%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           R+ RT FTT QL  LER F + QY  +  R E +  L L+E +V++
Sbjct: 143 RKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKI 188


>S75308-1|AAD14169.1|  267|Homo sapiens Msx-2 homolog protein.
          Length = 267

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 20/46 (43%), Positives = 28/46 (60%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           R+ RT FTT QL  LER F + QY  +  R E +  L L+E +V++
Sbjct: 143 RKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKI 188


>M97676-1|AAA52683.1|  297|Homo sapiens homeobox protein protein.
          Length = 297

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 20/46 (43%), Positives = 28/46 (60%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           R+ RT FTT QL  LER F + QY  +  R E +  L L+E +V++
Sbjct: 167 RKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKI 212


>M76732-1|AAA58665.1|  297|Homo sapiens HOX7 protein.
          Length = 297

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 20/46 (43%), Positives = 28/46 (60%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           R+ RT FTT QL  LER F + QY  +  R E +  L L+E +V++
Sbjct: 167 RKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKI 212


>L22499-1|AAB42178.1|  267|Homo sapiens Msx2 protein.
          Length = 267

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 20/46 (43%), Positives = 28/46 (60%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           R+ RT FTT QL  LER F + QY  +  R E +  L L+E +V++
Sbjct: 143 RKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKI 188


>D89377-1|BAA13949.1|  267|Homo sapiens MSX-2 protein.
          Length = 267

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 20/46 (43%), Positives = 28/46 (60%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           R+ RT FTT QL  LER F + QY  +  R E +  L L+E +V++
Sbjct: 143 RKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKI 188


>D31771-1|BAA06549.1|  267|Homo sapiens MSX-2 protein.
          Length = 267

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 20/46 (43%), Positives = 28/46 (60%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           R+ RT FTT QL  LER F + QY  +  R E +  L L+E +V++
Sbjct: 143 RKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKI 188


>D14970-1|BAA03611.1|  172|Homo sapiens HOX-8 protein protein.
          Length = 172

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 20/46 (43%), Positives = 28/46 (60%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           R+ RT FTT QL  LER F + QY  +  R E +  L L+E +V++
Sbjct: 48  RKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKI 93


>BT009814-1|AAP88816.1|  267|Homo sapiens msh homeo box homolog 2
           (Drosophila) protein.
          Length = 267

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 20/46 (43%), Positives = 28/46 (60%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           R+ RT FTT QL  LER F + QY  +  R E +  L L+E +V++
Sbjct: 143 RKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKI 188


>BC111572-1|AAI11573.1|  279|Homo sapiens BarH-like homeobox 2
           protein.
          Length = 279

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 22/50 (44%), Positives = 30/50 (60%)

Query: 56  RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
           R +K RRSRT FT  QL  LE+ F K +Y     R +LA  L L++ +V+
Sbjct: 129 RQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVK 178


>BC111432-1|AAI11433.1|  279|Homo sapiens BarH-like homeobox 2
           protein.
          Length = 279

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 22/50 (44%), Positives = 30/50 (60%)

Query: 56  RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
           R +K RRSRT FT  QL  LE+ F K +Y     R +LA  L L++ +V+
Sbjct: 129 RQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVK 178


>BC069378-1|AAH69378.1|  279|Homo sapiens BarH-like homeobox 2
           protein.
          Length = 279

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 22/50 (44%), Positives = 30/50 (60%)

Query: 56  RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
           R +K RRSRT FT  QL  LE+ F K +Y     R +LA  L L++ +V+
Sbjct: 129 RQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVK 178


>BC067353-1|AAH67353.1|  297|Homo sapiens MSX1 protein protein.
          Length = 297

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 20/46 (43%), Positives = 28/46 (60%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           R+ RT FTT QL  LER F + QY  +  R E +  L L+E +V++
Sbjct: 167 RKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKI 212


>BC021719-1|AAH21719.1|  288|Homo sapiens PEPP subfamily gene 2
           protein.
          Length = 288

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 18/40 (45%), Positives = 24/40 (60%)

Query: 67  FTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           FT  QL ELER F + Q+P  F R  LA  + ++E  VQ+
Sbjct: 141 FTPLQLQELERIFQREQFPSEFLRRRLARSMNVTELAVQI 180


>BC021285-1|AAH21285.4|  303|Homo sapiens msh homeobox 1 protein.
          Length = 303

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 20/46 (43%), Positives = 28/46 (60%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           R+ RT FTT QL  LER F + QY  +  R E +  L L+E +V++
Sbjct: 173 RKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKI 218


>BC015509-1|AAH15509.1|  267|Homo sapiens msh homeobox 2 protein.
          Length = 267

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 20/46 (43%), Positives = 28/46 (60%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           R+ RT FTT QL  LER F + QY  +  R E +  L L+E +V++
Sbjct: 143 RKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKI 188


>AL590526-1|CAC36519.1|  288|Homo sapiens hypothetical protein
           protein.
          Length = 288

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 18/40 (45%), Positives = 24/40 (60%)

Query: 67  FTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           FT  QL ELER F + Q+P  F R  LA  + ++E  VQ+
Sbjct: 141 FTPLQLQELERIFQREQFPSEFLRRRLARSMNVTELAVQI 180


>AK058125-1|BAB71675.1|  288|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25396 fis, clone TST02591. ).
          Length = 288

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 18/40 (45%), Positives = 24/40 (60%)

Query: 67  FTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           FT  QL ELER F + Q+P  F R  LA  + ++E  VQ+
Sbjct: 141 FTPLQLQELERIFQREQFPSEFLRRRLARSMNVTELAVQI 180


>AJ243512-1|CAB50736.1|  279|Homo sapiens Barx2 protein protein.
          Length = 279

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 22/50 (44%), Positives = 30/50 (60%)

Query: 56  RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
           R +K RRSRT FT  QL  LE+ F K +Y     R +LA  L L++ +V+
Sbjct: 129 RQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVK 178


>AF426432-1|AAL17870.1|  297|Homo sapiens muscle segment homeobox 1
           protein.
          Length = 297

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 20/46 (43%), Positives = 28/46 (60%)

Query: 61  RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           R+ RT FTT QL  LER F + QY  +  R E +  L L+E +V++
Sbjct: 167 RKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKI 212


>AF317219-1|AAL02160.1|  288|Homo sapiens homeobox protein protein.
          Length = 288

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 18/40 (45%), Positives = 24/40 (60%)

Query: 67  FTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           FT  QL ELER F + Q+P  F R  LA  + ++E  VQ+
Sbjct: 141 FTPLQLQELERIFQREQFPSEFLRRRLARSMNVTELAVQI 180


>AF171222-1|AAF09453.1|  254|Homo sapiens BARX2 protein.
          Length = 254

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 22/50 (44%), Positives = 30/50 (60%)

Query: 56  RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
           R +K RRSRT FT  QL  LE+ F K +Y     R +LA  L L++ +V+
Sbjct: 104 RQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVK 153


>AF031924-1|AAC04705.1|  254|Homo sapiens barx2 protein.
          Length = 254

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 22/50 (44%), Positives = 30/50 (60%)

Query: 56  RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
           R +K RRSRT FT  QL  LE+ F K +Y     R +LA  L L++ +V+
Sbjct: 104 RQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVK 153


>BC111966-1|AAI11967.1|  333|Homo sapiens bagpipe homeobox 1
           protein.
          Length = 333

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)

Query: 54  AGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A +PRK +RSR  F+  Q+ ELER F+  +Y     R +LA  L+L+E +V++
Sbjct: 201 APKPRK-KRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKI 252


>AF009802-1|AAB82784.1|  333|Homo sapiens homeodomain protein
           protein.
          Length = 333

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)

Query: 54  AGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A +PRK +RSR  F+  Q+ ELER F+  +Y     R +LA  L+L+E +V++
Sbjct: 201 APKPRK-KRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKI 252


>AF009801-1|AAB82783.1|  333|Homo sapiens homeodomain protein
           protein.
          Length = 333

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)

Query: 54  AGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A +PRK +RSR  F+  Q+ ELER F+  +Y     R +LA  L+L+E +V++
Sbjct: 201 APKPRK-KRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKI 252


>AF005260-1|AAC39536.1|  333|Homo sapiens homeodomain-containing
           protein BAPX1 protein.
          Length = 333

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)

Query: 54  AGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
           A +PRK +RSR  F+  Q+ ELER F+  +Y     R +LA  L+L+E +V++
Sbjct: 201 APKPRK-KRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKI 252


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.319    0.132    0.364 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,690,537
Number of Sequences: 224733
Number of extensions: 215906
Number of successful extensions: 1021
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 440
Number of HSP's gapped (non-prelim): 580
length of query: 124
length of database: 73,234,838
effective HSP length: 81
effective length of query: 43
effective length of database: 55,031,465
effective search space: 2366352995
effective search space used: 2366352995
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)

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