Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000211-TA|BGIBMGA000211-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like
(124 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 80 7e-18
AY563109-1|AAS99587.1| 46|Tribolium castaneum aristaless protein. 73 6e-16
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 69 2e-14
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 66 9e-14
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 45 2e-07
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 39 2e-05
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 38 2e-05
X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein. 38 3e-05
AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein. 38 3e-05
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 38 4e-05
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 37 5e-05
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 37 5e-05
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 35 2e-04
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 35 2e-04
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 35 2e-04
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 35 2e-04
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 35 2e-04
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 35 2e-04
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 35 2e-04
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 35 2e-04
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 35 2e-04
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 35 2e-04
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 35 2e-04
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 35 2e-04
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 35 3e-04
AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax prot... 35 3e-04
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 34 3e-04
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 34 3e-04
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 34 3e-04
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 34 3e-04
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 34 3e-04
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 34 3e-04
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 34 3e-04
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 33 8e-04
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 33 8e-04
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 33 8e-04
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 33 8e-04
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 33 8e-04
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 32 0.002
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 31 0.004
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 29 0.010
AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle pr... 20 8.0
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 79.8 bits (188), Expect = 7e-18
Identities = 35/49 (71%), Positives = 44/49 (89%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RK RRSRTTFT +QL ELE+AF++TQYPD++TREELA R +L+EAR+QV
Sbjct: 218 RKQRRSRTTFTAHQLDELEKAFERTQYPDIYTREELAQRTKLTEARIQV 266
>AY563109-1|AAS99587.1| 46|Tribolium castaneum aristaless protein.
Length = 46
Score = 73.3 bits (172), Expect = 6e-16
Identities = 32/43 (74%), Positives = 39/43 (90%)
Query: 64 RTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RTTFT+YQL ELE+AF +T YPDVFTREELAM++ L+EAR+QV
Sbjct: 1 RTTFTSYQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQV 43
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 68.5 bits (160), Expect = 2e-14
Identities = 32/53 (60%), Positives = 39/53 (73%)
Query: 54 AGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
AG RK RR RTTFT QL LE F KT+YPD+F REE+A+++ L E+RVQV
Sbjct: 63 AGNQRKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQV 115
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 66.1 bits (154), Expect = 9e-14
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 57 PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
PRK RR RTTFT QL LE F KT+YPD+F REE+A+++ L E+RVQV
Sbjct: 124 PRKQRRERTTFTRAQLDLLEGLFAKTRYPDIFMREEVAVKINLPESRVQV 173
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 44.8 bits (101), Expect = 2e-07
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 55 GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
G+ +K+R+ RT +++ QL +L R F +TQY + R ELA L L++ +V++
Sbjct: 116 GKGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKI 167
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 38.7 bits (86), Expect = 2e-05
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
R+ RT FTT QL LE+ F QY + R E + L L+E +V++
Sbjct: 116 RKPRTPFTTQQLLALEKKFRDKQYLSIAERAEFSSSLRLTEPQVKI 161
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 38.3 bits (85), Expect = 2e-05
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+ +RR RT FT QL LE+ F K Y R ELA +L L E+ ++V
Sbjct: 69 QNIRRYRTAFTREQLARLEKEFFKENYVSRPRRCELAAQLNLPESTIKV 117
>X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein.
Length = 251
Score = 37.9 bits (84), Expect = 3e-05
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 56 RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+P +R+RT +T+ QL ELER F +Y R ++A L LSE ++++
Sbjct: 84 KPTAGKRARTAYTSAQLVELEREFHHGKYLSRPRRIQIAENLNLSERQIKI 134
>AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein.
Length = 246
Score = 37.9 bits (84), Expect = 3e-05
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 56 RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+P +R+RT +T+ QL ELER F +Y R ++A L LSE ++++
Sbjct: 75 KPTAGKRARTAYTSAQLVELEREFHHGKYLSRPRRIQIAENLNLSERQIKI 125
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 37.5 bits (83), Expect = 4e-05
Identities = 21/57 (36%), Positives = 29/57 (50%)
Query: 50 EAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
E + + +R T FT+ QL ELER F Y R E+A L LSE +V++
Sbjct: 107 ERLTPSKDASSKRIXTAFTSTQLLELEREFASNMYLSRLRRIEIATCLRLSEKQVKI 163
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 37.1 bits (82), Expect = 5e-05
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+R+RT +T+ QL ELER F +++Y R ++A L L+E ++++
Sbjct: 86 KRARTAYTSSQLVELEREFHRSKYLCRPRRIQMAQNLNLTERQIKI 131
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 37.1 bits (82), Expect = 5e-05
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+R+RT +T+ QL ELER F +++Y R ++A L L+E ++++
Sbjct: 106 KRARTAYTSSQLVELEREFHRSKYLCRPRRIQMAQNLNLTERQIKI 151
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 35.1 bits (77), Expect = 2e-04
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+R RT +T +Q+ ELE+ F +Y R E+A L LSE ++++
Sbjct: 234 KRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKI 279
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 35.1 bits (77), Expect = 2e-04
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+R RT +T +Q+ ELE+ F +Y R E+A L LSE ++++
Sbjct: 234 KRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKI 279
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 35.1 bits (77), Expect = 2e-04
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+R+R T+T YQ ELE+ F +Y R E+A L L+E ++++
Sbjct: 184 KRTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAESLRLTERQIKI 229
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 35.1 bits (77), Expect = 2e-04
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 64 RTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RT FT QL ELE+ F +Y R E+A L+L+E +V++
Sbjct: 257 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKI 299
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 35.1 bits (77), Expect = 2e-04
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RR RT +T QL ELE+ F +Y R E+A L+L+E +V+V
Sbjct: 5 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKV 50
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 35.1 bits (77), Expect = 2e-04
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+R+R T+T YQ ELE+ F +Y R E+A L L+E ++++
Sbjct: 184 KRTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAESLRLTERQIKI 229
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 35.1 bits (77), Expect = 2e-04
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 50 EAIDA-GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+A DA G+ R + R +T +Q ELE+ F ++Y + + ELA L LSE +V++
Sbjct: 145 DAPDAIGKTRTKDKYRVVYTDHQRVELEKEFYYSRYITIRRKAELANSLGLSERQVKI 202
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 35.1 bits (77), Expect = 2e-04
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+R RT +T +Q+ ELE+ F +Y R E+A L LSE ++++
Sbjct: 234 KRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKI 279
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 35.1 bits (77), Expect = 2e-04
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+R+R T+T YQ ELE+ F +Y R E+A L L+E ++++
Sbjct: 184 KRTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAESLRLTERQIKI 229
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 35.1 bits (77), Expect = 2e-04
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 64 RTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RT FT QL ELE+ F +Y R E+A L+L+E +V++
Sbjct: 46 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKI 88
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 35.1 bits (77), Expect = 2e-04
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 64 RTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RT FT QL ELE+ F +Y R E+A L+L+E +V++
Sbjct: 46 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKI 88
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 35.1 bits (77), Expect = 2e-04
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RR RT +T QL ELE+ F +Y R E+A L+L+E +V+V
Sbjct: 136 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKV 181
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 34.7 bits (76), Expect = 3e-04
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RR R T+T YQ ELE+ F Y R E+A L L+E ++++
Sbjct: 224 RRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKI 269
>AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax
protein.
Length = 96
Score = 34.7 bits (76), Expect = 3e-04
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RR R T+T YQ ELE+ F Y R E+A L L+E ++++
Sbjct: 6 RRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKI 51
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 34.3 bits (75), Expect = 3e-04
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 59 KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+ +R RT++T YQ ELE+ F +Y R E+A L L+E ++++
Sbjct: 219 ETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 266
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 34.3 bits (75), Expect = 3e-04
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 59 KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+ +R RT++T YQ ELE+ F +Y R E+A L L+E ++++
Sbjct: 219 ETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 266
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 34.3 bits (75), Expect = 3e-04
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 59 KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+ +R RT++T YQ ELE+ F +Y R E+A L L+E ++++
Sbjct: 219 ETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 266
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 34.3 bits (75), Expect = 3e-04
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 59 KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+ +R RT++T YQ ELE+ F +Y R E+A L L+E ++++
Sbjct: 175 ETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 222
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 34.3 bits (75), Expect = 3e-04
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 59 KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+ +R RT++T YQ ELE+ F +Y R E+A L L+E ++++
Sbjct: 219 ETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 266
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 34.3 bits (75), Expect = 3e-04
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 59 KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+ +R RT++T YQ ELE+ F +Y R E+A L L+E ++++
Sbjct: 7 ETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 54
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 34.3 bits (75), Expect = 3e-04
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 59 KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+ +R RT++T YQ ELE+ F +Y R E+A L L+E ++++
Sbjct: 219 ETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 266
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 33.1 bits (72), Expect = 8e-04
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 55 GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
G PR RR R T+T +Q ELE+ F Y R E+A L L+E ++++
Sbjct: 3 GCPR--RRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKI 52
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 33.1 bits (72), Expect = 8e-04
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+R R T+T YQ ELE+ F +Y R E+A L L+E ++++
Sbjct: 243 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 288
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 33.1 bits (72), Expect = 8e-04
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+R R T+T YQ ELE+ F +Y R E+A L L+E ++++
Sbjct: 245 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 290
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 33.1 bits (72), Expect = 8e-04
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 55 GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
G PR RR R T+T +Q ELE+ F Y R E+A L L+E ++++
Sbjct: 154 GCPR--RRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKI 203
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 33.1 bits (72), Expect = 8e-04
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 55 GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
G PR RR R T+T +Q ELE+ F Y R E+A L L+E ++++
Sbjct: 213 GCPR--RRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKI 262
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 31.9 bits (69), Expect = 0.002
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 60 VRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
VR+ R ++ +Q ELE+ F Y R ELA L L+E +V++
Sbjct: 243 VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQVKI 289
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 30.7 bits (66), Expect = 0.004
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 50 EAIDA-GRPRKVRRSRTTFTTYQLHELERAFD-KTQYPDVFTREELAMRLELSEARVQV 106
+A DA G+ R + R +T Q ELE+ F ++Y + + ELA L LSE ++++
Sbjct: 145 DAPDAIGKTRTKDKYRVVYTDLQRIELEKEFTFVSKYITIKRKSELAENLGLSERQIKI 203
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 29.5 bits (63), Expect = 0.010
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 59 KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELS 100
+ +R RT++T YQ ELE+ F +Y R E+A L L+
Sbjct: 219 ETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 260
>AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle
protein.
Length = 361
Score = 19.8 bits (39), Expect = 8.0
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARV 104
R+ RR+ + + L+E + YP +EELA + ++ ++V
Sbjct: 231 RRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQV 277
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.319 0.132 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,565
Number of Sequences: 317
Number of extensions: 367
Number of successful extensions: 42
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of query: 124
length of database: 114,650
effective HSP length: 50
effective length of query: 74
effective length of database: 98,800
effective search space: 7311200
effective search space used: 7311200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.9 bits)
S2: 39 (19.8 bits)
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