Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000211-TA|BGIBMGA000211-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like
(124 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein. 75 2e-14
AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans hom... 75 2e-14
Z81143-3|CAB03519.2| 276|Caenorhabditis elegans Hypothetical pr... 74 3e-14
Z68008-6|CAA92001.1| 362|Caenorhabditis elegans Hypothetical pr... 74 3e-14
Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical pr... 66 9e-12
Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical pr... 66 9e-12
Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical pr... 66 9e-12
U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-1... 66 9e-12
U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable abnorm... 66 9e-12
U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein. 66 9e-12
U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein. 66 9e-12
Z47072-1|CAA87368.1| 252|Caenorhabditis elegans Hypothetical pr... 65 1e-11
X64904-1|CAA46108.1| 184|Caenorhabditis elegans unc-4 protein. 65 1e-11
AL132858-4|CAB60479.2| 338|Caenorhabditis elegans Hypothetical ... 63 6e-11
AL132858-3|CAB60478.2| 391|Caenorhabditis elegans Hypothetical ... 63 6e-11
AF381629-1|AAL12002.1| 223|Caenorhabditis elegans homeodomain p... 63 6e-11
AF381628-1|AAL12001.1| 372|Caenorhabditis elegans homeodomain p... 63 6e-11
AF381627-1|AAL12000.1| 332|Caenorhabditis elegans homeodomain p... 63 6e-11
Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical pr... 62 1e-10
X52812-1|CAB57216.1| 66|Caenorhabditis elegans protein ( Caeno... 62 1e-10
U50184-2|AAB93323.1| 344|Caenorhabditis elegans C.elegans homeo... 62 1e-10
U19995-1|AAA93063.1| 344|Caenorhabditis elegans ceh-10 protein. 62 1e-10
Z70780-17|CAA94830.3| 264|Caenorhabditis elegans Hypothetical p... 62 1e-10
Z70754-11|CAA94780.3| 264|Caenorhabditis elegans Hypothetical p... 62 1e-10
Z73422-5|CAE54882.1| 323|Caenorhabditis elegans Hypothetical pr... 57 4e-09
Z73422-4|CAA97770.1| 319|Caenorhabditis elegans Hypothetical pr... 57 4e-09
L37867-1|AAA63155.1| 319|Caenorhabditis elegans homeodomain pro... 57 4e-09
AF038608-13|AAC25819.1| 253|Caenorhabditis elegans Hypothetical... 57 4e-09
Z81046-3|CAB02821.1| 257|Caenorhabditis elegans Hypothetical pr... 54 2e-08
U39648-4|AAK39290.1| 220|Caenorhabditis elegans Hypothetical pr... 54 4e-08
AC006835-2|AAF40014.1| 229|Caenorhabditis elegans Hypothetical ... 53 5e-08
U64600-5|AAK39202.2| 223|Caenorhabditis elegans C.elegans homeo... 46 1e-05
Z82279-3|CAD62039.1| 106|Caenorhabditis elegans Hypothetical pr... 45 1e-05
Z82279-2|CAB05260.2| 256|Caenorhabditis elegans Hypothetical pr... 45 1e-05
AY151210-1|AAN72827.1| 106|Caenorhabditis elegans COG-1B protein. 45 1e-05
AY151209-1|AAN72826.1| 256|Caenorhabditis elegans COG-1A protein. 45 1e-05
U64600-4|AAK39201.1| 299|Caenorhabditis elegans C.elegans homeo... 45 2e-05
Z95623-1|CAB09133.1| 314|Caenorhabditis elegans Hypothetical pr... 43 6e-05
X17077-1|CAA34929.1| 202|Caenorhabditis elegans ceh-13 homeodom... 43 6e-05
AC006679-1|AAK84466.1| 202|Caenorhabditis elegans C.elegans hom... 43 6e-05
AC024847-9|AAR30201.1| 147|Caenorhabditis elegans C.elegans hom... 43 7e-05
X52810-1|CAB57215.1| 67|Caenorhabditis elegans protein ( Caeno... 42 1e-04
U55376-2|AAA98004.1| 132|Caenorhabditis elegans C.elegans homeo... 42 1e-04
Z73974-7|CAL90892.1| 283|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z73974-6|CAL90891.1| 215|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z73974-5|CAA98272.1| 346|Caenorhabditis elegans Hypothetical pr... 42 2e-04
X52811-1|CAB57217.1| 60|Caenorhabditis elegans protein ( Caeno... 42 2e-04
U10081-1|AAA20841.1| 346|Caenorhabditis elegans CEH-22 homeopro... 42 2e-04
U10080-1|AAA20840.1| 346|Caenorhabditis elegans CEH-22 homeopro... 42 2e-04
Z48621-10|CAA88539.1| 225|Caenorhabditis elegans Hypothetical p... 41 2e-04
AY246429-1|AAO91836.1| 209|Caenorhabditis elegans homeodomain p... 41 2e-04
AY246428-1|AAO91835.1| 209|Caenorhabditis elegans homeodomain p... 41 2e-04
AF286218-1|AAF88063.1| 225|Caenorhabditis elegans VAB-15 protein. 41 2e-04
AF003137-4|AAB93639.2| 209|Caenorhabditis elegans C.elegans hom... 41 2e-04
Z77133-5|CAB00867.3| 232|Caenorhabditis elegans Hypothetical pr... 40 4e-04
AY205144-1|AAO46042.1| 156|Caenorhabditis elegans NK-2 family h... 40 4e-04
AF039720-2|AAB96698.1| 180|Caenorhabditis elegans C.elegans hom... 40 4e-04
Z66494-8|CAA91264.1| 84|Caenorhabditis elegans Hypothetical pr... 40 5e-04
AF091459-1|AAC36745.1| 84|Caenorhabditis elegans homeodomain p... 40 5e-04
Z73428-3|CAA97809.1| 247|Caenorhabditis elegans Hypothetical pr... 40 7e-04
Z32680-4|CAA83601.1| 273|Caenorhabditis elegans Hypothetical pr... 40 7e-04
X96636-1|CAA65441.1| 263|Caenorhabditis elegans vab-7 protein. 40 7e-04
AJ312288-1|CAC41972.1| 278|Caenorhabditis elegans putative tran... 40 7e-04
Z48783-8|CAA88702.2| 308|Caenorhabditis elegans Hypothetical pr... 39 9e-04
Z48582-6|CAA88468.2| 308|Caenorhabditis elegans Hypothetical pr... 39 9e-04
U55856-2|AAA98021.1| 197|Caenorhabditis elegans Touch abnormal ... 38 0.002
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 38 0.003
L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeo... 36 0.006
AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene... 36 0.006
Z81085-1|CAB03112.3| 263|Caenorhabditis elegans Hypothetical pr... 36 0.008
Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical pr... 35 0.015
U49944-3|AAM51525.1| 341|Caenorhabditis elegans Mesodermal line... 35 0.015
U41545-3|ABN43093.1| 152|Caenorhabditis elegans Hypothetical pr... 35 0.015
AF026056-1|AAB81844.1| 298|Caenorhabditis elegans NK-2 class ho... 35 0.015
AL031620-3|CAA20928.1| 310|Caenorhabditis elegans Hypothetical ... 34 0.026
U41017-5|AAC48216.2| 495|Caenorhabditis elegans C.elegans homeo... 33 0.045
L19249-1|AAC37167.1| 303|Caenorhabditis elegans homeobox protei... 33 0.045
L14429-3|AAA28218.1| 305|Caenorhabditis elegans C.elegans homeo... 33 0.045
AJ427855-1|CAD20808.1| 495|Caenorhabditis elegans CEH-21 protei... 33 0.045
AF023470-1|AAB86814.1| 183|Caenorhabditis elegans CEH-21 protein. 33 0.045
X17075-1|CAA34927.1| 75|Caenorhabditis elegans ceh-11 protein. 33 0.059
U56860-2|AAA98706.3| 225|Caenorhabditis elegans Defective phary... 33 0.059
L19247-1|AAC37166.1| 223|Caenorhabditis elegans homeobox protei... 33 0.059
L15201-6|AAP82660.1| 222|Caenorhabditis elegans Egg laying defe... 33 0.059
L15201-5|AAA27943.2| 219|Caenorhabditis elegans Egg laying defe... 33 0.059
L15201-4|AAN84878.1| 223|Caenorhabditis elegans Egg laying defe... 33 0.059
AY766389-1|AAV34757.1| 170|Caenorhabditis elegans PHA-2 protein. 33 0.059
Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical pr... 31 0.18
X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein ... 31 0.18
U72348-1|AAB17273.1| 355|Caenorhabditis elegans putative transc... 31 0.18
U39740-5|AAA80428.2| 355|Caenorhabditis elegans Lim domain fami... 31 0.18
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 31 0.24
M22751-1|AAA28106.1| 211|Caenorhabditis elegans protein ( C.ele... 31 0.31
L15201-2|AAA27945.2| 200|Caenorhabditis elegans Male abnormal p... 31 0.31
AF277990-1|AAG00458.1| 200|Caenorhabditis elegans MAB-5 protein. 31 0.31
Z46794-6|CAA86776.1| 416|Caenorhabditis elegans Hypothetical pr... 30 0.42
AL033514-1|CAA22081.2| 275|Caenorhabditis elegans Hypothetical ... 30 0.55
AF172092-1|AAD48876.1| 275|Caenorhabditis elegans homeodomain p... 30 0.55
U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain fami... 29 0.73
U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeo... 29 0.96
AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox ... 29 0.96
Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical pr... 29 1.3
U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative transc... 29 1.3
Z46241-10|CAH19082.1| 268|Caenorhabditis elegans Hypothetical p... 28 2.2
Z46241-9|CAA86322.2| 270|Caenorhabditis elegans Hypothetical pr... 28 2.2
X62782-1|CAA44619.1| 208|Caenorhabditis elegans pal-1 protein. 28 2.2
X57140-1|CAA40419.1| 71|Caenorhabditis elegans ceh-3 protein. 28 2.2
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 28 2.2
AF106584-6|AAC78220.1| 424|Caenorhabditis elegans Hypothetical ... 27 3.9
Z81545-5|CAB04440.1| 389|Caenorhabditis elegans Hypothetical pr... 27 5.1
U70857-8|AAB09173.2| 256|Caenorhabditis elegans C.elegans homeo... 27 5.1
U41550-4|AAP31434.2| 514|Caenorhabditis elegans Hypothetical pr... 26 6.8
U28993-8|AAK31496.1| 632|Caenorhabditis elegans C.elegans homeo... 26 6.8
U28993-7|AAL27244.1| 641|Caenorhabditis elegans C.elegans homeo... 26 6.8
>AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein.
Length = 237
Score = 74.5 bits (175), Expect = 2e-14
Identities = 34/49 (69%), Positives = 43/49 (87%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RK RR RTTFT+ QL ELER+F +T YPD++TREE+AMR++L+EARVQV
Sbjct: 147 RKQRRIRTTFTSGQLKELERSFCETHYPDIYTREEIAMRIDLTEARVQV 195
>AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans
homeobox protein 17 protein.
Length = 237
Score = 74.5 bits (175), Expect = 2e-14
Identities = 34/49 (69%), Positives = 43/49 (87%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RK RR RTTFT+ QL ELER+F +T YPD++TREE+AMR++L+EARVQV
Sbjct: 147 RKQRRIRTTFTSGQLKELERSFCETHYPDIYTREEIAMRIDLTEARVQV 195
>Z81143-3|CAB03519.2| 276|Caenorhabditis elegans Hypothetical
protein ZK265.4 protein.
Length = 276
Score = 74.1 bits (174), Expect = 3e-14
Identities = 33/49 (67%), Positives = 40/49 (81%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+K RR+RTTFTT+QLH LE AFDKT YPDV+ RE LA +++L E RVQV
Sbjct: 58 KKQRRNRTTFTTFQLHALEAAFDKTHYPDVYARETLAAKVQLPEVRVQV 106
>Z68008-6|CAA92001.1| 362|Caenorhabditis elegans Hypothetical
protein R08B4.2 protein.
Length = 362
Score = 74.1 bits (174), Expect = 3e-14
Identities = 36/54 (66%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
Query: 53 DAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
D G+ RK RR RTTF+ +QL ELE+ F +T YPDVFTREELA R++L+EARVQV
Sbjct: 111 DNGK-RKQRRYRTTFSAFQLDELEKVFARTHYPDVFTREELATRVQLTEARVQV 163
>Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical
protein F14F3.1c protein.
Length = 296
Score = 65.7 bits (153), Expect = 9e-12
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RK++R+RT+FT Q+ LE+ F++T YPDVF RE LA +++L EAR+QV
Sbjct: 56 RKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 104
>Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical
protein F14F3.1b protein.
Length = 269
Score = 65.7 bits (153), Expect = 9e-12
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RK++R+RT+FT Q+ LE+ F++T YPDVF RE LA +++L EAR+QV
Sbjct: 29 RKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 77
>Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical
protein F14F3.1a protein.
Length = 455
Score = 65.7 bits (153), Expect = 9e-12
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RK++R+RT+FT Q+ LE+ F++T YPDVF RE LA +++L EAR+QV
Sbjct: 215 RKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 263
>U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-18
protein.
Length = 261
Score = 65.7 bits (153), Expect = 9e-12
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RK++R+RT+FT Q+ LE+ F++T YPDVF RE LA +++L EAR+QV
Sbjct: 21 RKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 69
>U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable
abnormal-3 protein.
Length = 455
Score = 65.7 bits (153), Expect = 9e-12
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RK++R+RT+FT Q+ LE+ F++T YPDVF RE LA +++L EAR+QV
Sbjct: 215 RKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 263
>U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein.
Length = 296
Score = 65.7 bits (153), Expect = 9e-12
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RK++R+RT+FT Q+ LE+ F++T YPDVF RE LA +++L EAR+QV
Sbjct: 56 RKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 104
>U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein.
Length = 284
Score = 65.7 bits (153), Expect = 9e-12
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RK++R+RT+FT Q+ LE+ F++T YPDVF RE LA +++L EAR+QV
Sbjct: 44 RKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 92
>Z47072-1|CAA87368.1| 252|Caenorhabditis elegans Hypothetical
protein F26C11.2 protein.
Length = 252
Score = 65.3 bits (152), Expect = 1e-11
Identities = 31/48 (64%), Positives = 38/48 (79%)
Query: 59 KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
K RR+RT F+ +QL ELE AF+ + YPDVF RE LAMRL+L E+RVQV
Sbjct: 87 KRRRTRTNFSGWQLEELESAFEASHYPDVFMREALAMRLDLLESRVQV 134
>X64904-1|CAA46108.1| 184|Caenorhabditis elegans unc-4 protein.
Length = 184
Score = 65.3 bits (152), Expect = 1e-11
Identities = 31/48 (64%), Positives = 38/48 (79%)
Query: 59 KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
K RR+RT F+ +QL ELE AF+ + YPDVF RE LAMRL+L E+RVQV
Sbjct: 51 KRRRTRTNFSGWQLEELESAFEASHYPDVFMREALAMRLDLLESRVQV 98
>AL132858-4|CAB60479.2| 338|Caenorhabditis elegans Hypothetical
protein Y113G7A.6b protein.
Length = 338
Score = 62.9 bits (146), Expect = 6e-11
Identities = 30/52 (57%), Positives = 38/52 (73%)
Query: 55 GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
G RK RR RTTFT QL LE F KT+YPD+F RE++A +++L E+RVQV
Sbjct: 141 GFSRKQRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQV 192
>AL132858-3|CAB60478.2| 391|Caenorhabditis elegans Hypothetical
protein Y113G7A.6a protein.
Length = 391
Score = 62.9 bits (146), Expect = 6e-11
Identities = 30/52 (57%), Positives = 38/52 (73%)
Query: 55 GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
G RK RR RTTFT QL LE F KT+YPD+F RE++A +++L E+RVQV
Sbjct: 194 GFSRKQRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQV 245
>AF381629-1|AAL12002.1| 223|Caenorhabditis elegans homeodomain
protein TTX-1 protein.
Length = 223
Score = 62.9 bits (146), Expect = 6e-11
Identities = 30/52 (57%), Positives = 38/52 (73%)
Query: 55 GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
G RK RR RTTFT QL LE F KT+YPD+F RE++A +++L E+RVQV
Sbjct: 157 GFSRKQRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQV 208
>AF381628-1|AAL12001.1| 372|Caenorhabditis elegans homeodomain
protein TTX-1 protein.
Length = 372
Score = 62.9 bits (146), Expect = 6e-11
Identities = 30/52 (57%), Positives = 38/52 (73%)
Query: 55 GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
G RK RR RTTFT QL LE F KT+YPD+F RE++A +++L E+RVQV
Sbjct: 175 GFSRKQRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQV 226
>AF381627-1|AAL12000.1| 332|Caenorhabditis elegans homeodomain
protein TTX-1 protein.
Length = 332
Score = 62.9 bits (146), Expect = 6e-11
Identities = 30/52 (57%), Positives = 38/52 (73%)
Query: 55 GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
G RK RR RTTFT QL LE F KT+YPD+F RE++A +++L E+RVQV
Sbjct: 135 GFSRKQRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQV 186
>Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical
protein C37E2.5 protein.
Length = 278
Score = 62.1 bits (144), Expect = 1e-10
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 57 PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
PRK RR RTT++ QL LE F++TQYPDVF RE +A ++ L E+R+QV
Sbjct: 38 PRKNRRERTTYSRQQLEILETLFNETQYPDVFARERVADQIRLQESRIQV 87
>X52812-1|CAB57216.1| 66|Caenorhabditis elegans protein (
Caenorhabditis elegansceh-10 gene, unknown homeobox. ).
Length = 66
Score = 62.1 bits (144), Expect = 1e-10
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RK RR RT FT YQ+ ELE+AF + YPD++ RE LA + EL E R+QV
Sbjct: 5 RKKRRHRTIFTQYQIDELEKAFQDSHYPDIYAREVLAGKTELQEDRIQV 53
>U50184-2|AAB93323.1| 344|Caenorhabditis elegans C.elegans homeobox
protein 10 protein.
Length = 344
Score = 62.1 bits (144), Expect = 1e-10
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RK RR RT FT YQ+ ELE+AF + YPD++ RE LA + EL E R+QV
Sbjct: 134 RKKRRHRTIFTQYQIDELEKAFQDSHYPDIYAREVLAGKTELQEDRIQV 182
>U19995-1|AAA93063.1| 344|Caenorhabditis elegans ceh-10 protein.
Length = 344
Score = 62.1 bits (144), Expect = 1e-10
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RK RR RT FT YQ+ ELE+AF + YPD++ RE LA + EL E R+QV
Sbjct: 134 RKKRRHRTIFTQYQIDELEKAFQDSHYPDIYAREVLAGKTELQEDRIQV 182
>Z70780-17|CAA94830.3| 264|Caenorhabditis elegans Hypothetical
protein F58E6.10 protein.
Length = 264
Score = 61.7 bits (143), Expect = 1e-10
Identities = 28/46 (60%), Positives = 35/46 (76%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RR RTTFT QL EL+ AF K+ YPD++ REELA +L+EAR+QV
Sbjct: 86 RRHRTTFTQEQLQELDAAFQKSHYPDIYVREELARITKLNEARIQV 131
>Z70754-11|CAA94780.3| 264|Caenorhabditis elegans Hypothetical
protein F58E6.10 protein.
Length = 264
Score = 61.7 bits (143), Expect = 1e-10
Identities = 28/46 (60%), Positives = 35/46 (76%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RR RTTFT QL EL+ AF K+ YPD++ REELA +L+EAR+QV
Sbjct: 86 RRHRTTFTQEQLQELDAAFQKSHYPDIYVREELARITKLNEARIQV 131
>Z73422-5|CAE54882.1| 323|Caenorhabditis elegans Hypothetical
protein B0564.10b protein.
Length = 323
Score = 56.8 bits (131), Expect = 4e-09
Identities = 26/54 (48%), Positives = 39/54 (72%)
Query: 53 DAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+ G+ +K RR RT FT++QL ELE F + +YPD+ REE+A+ + L+E RV+V
Sbjct: 105 NGGKIQKPRRQRTHFTSHQLTELENWFSRNRYPDMACREEIAVWISLTEPRVRV 158
>Z73422-4|CAA97770.1| 319|Caenorhabditis elegans Hypothetical
protein B0564.10a protein.
Length = 319
Score = 56.8 bits (131), Expect = 4e-09
Identities = 26/54 (48%), Positives = 39/54 (72%)
Query: 53 DAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+ G+ +K RR RT FT++QL ELE F + +YPD+ REE+A+ + L+E RV+V
Sbjct: 105 NGGKIQKPRRQRTHFTSHQLTELENWFSRNRYPDMACREEIAVWISLTEPRVRV 158
>L37867-1|AAA63155.1| 319|Caenorhabditis elegans homeodomain
protein protein.
Length = 319
Score = 56.8 bits (131), Expect = 4e-09
Identities = 26/54 (48%), Positives = 39/54 (72%)
Query: 53 DAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+ G+ +K RR RT FT++QL ELE F + +YPD+ REE+A+ + L+E RV+V
Sbjct: 105 NGGKIQKPRRQRTHFTSHQLTELENWFSRNRYPDMACREEIAVWISLTEPRVRV 158
>AF038608-13|AAC25819.1| 253|Caenorhabditis elegans Hypothetical
protein C09G12.1 protein.
Length = 253
Score = 56.8 bits (131), Expect = 4e-09
Identities = 29/49 (59%), Positives = 34/49 (69%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
R+VRR RT F+ QL LE AF K QYPDV RE L + EL+EAR+QV
Sbjct: 89 RRVRRLRTAFSENQLELLEEAFLKCQYPDVQQRETLGKQTELAEARIQV 137
>Z81046-3|CAB02821.1| 257|Caenorhabditis elegans Hypothetical
protein C37E2.4 protein.
Length = 257
Score = 54.4 bits (125), Expect = 2e-08
Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 53 DAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
++GR R RR RT+F QL +LE+ F +TQYPDV RE LA + L + RVQV
Sbjct: 49 ESGR-RAGRRERTSFNRGQLDQLEKVFRETQYPDVHRREALAKAINLPDGRVQV 101
>U39648-4|AAK39290.1| 220|Caenorhabditis elegans Hypothetical
protein T13C5.4 protein.
Length = 220
Score = 53.6 bits (123), Expect = 4e-08
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 57 PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
P + +R+R TF Q+ E+E+ F + QYPD +RE+LA +++L E RVQ+
Sbjct: 41 PDRKKRNRITFDANQIDEMEKVFAENQYPDTMSREKLANKIQLHEERVQI 90
>AC006835-2|AAF40014.1| 229|Caenorhabditis elegans Hypothetical
protein ZK993.1 protein.
Length = 229
Score = 53.2 bits (122), Expect = 5e-08
Identities = 26/49 (53%), Positives = 32/49 (65%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
R+ RR RT F+ QL+ LE F T YPD TREELA++ L E RV+V
Sbjct: 107 RRKRRHRTIFSEEQLNILETTFSTTHYPDATTREELAVQCSLKEERVEV 155
>U64600-5|AAK39202.2| 223|Caenorhabditis elegans C.elegans homeobox
protein 31 protein.
Length = 223
Score = 45.6 bits (103), Expect = 1e-05
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQVGA 108
+K R++RT FT QL ELE F+K +Y V R ELA R+ L++ Q+GA
Sbjct: 36 KKARKARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTD--TQIGA 84
>Z82279-3|CAD62039.1| 106|Caenorhabditis elegans Hypothetical
protein R03C1.3b protein.
Length = 106
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/46 (43%), Positives = 34/46 (73%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
++SR TFT +Q+++LER F++T+Y R +LA L +SE++V+V
Sbjct: 20 KQSRPTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQVKV 65
>Z82279-2|CAB05260.2| 256|Caenorhabditis elegans Hypothetical
protein R03C1.3a protein.
Length = 256
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/46 (43%), Positives = 34/46 (73%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
++SR TFT +Q+++LER F++T+Y R +LA L +SE++V+V
Sbjct: 170 KQSRPTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQVKV 215
>AY151210-1|AAN72827.1| 106|Caenorhabditis elegans COG-1B protein.
Length = 106
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/46 (43%), Positives = 34/46 (73%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
++SR TFT +Q+++LER F++T+Y R +LA L +SE++V+V
Sbjct: 20 KQSRPTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQVKV 65
>AY151209-1|AAN72826.1| 256|Caenorhabditis elegans COG-1A protein.
Length = 256
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/46 (43%), Positives = 34/46 (73%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
++SR TFT +Q+++LER F++T+Y R +LA L +SE++V+V
Sbjct: 170 KQSRPTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQVKV 215
>U64600-4|AAK39201.1| 299|Caenorhabditis elegans C.elegans homeobox
protein 30 protein.
Length = 299
Score = 44.8 bits (101), Expect = 2e-05
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 55 GRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
G +K R++RT FT QL ELE F+K +Y V R +LA R+ L++ +V+
Sbjct: 152 GSCKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVK 202
>Z95623-1|CAB09133.1| 314|Caenorhabditis elegans Hypothetical
protein Y53C12C.1 protein.
Length = 314
Score = 43.2 bits (97), Expect = 6e-05
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
R SR+TFT QL LE F + YP R +L R L EAR+QV
Sbjct: 204 RLSRSTFTNEQLQSLEEVFLRDPYPSPNERADLVKRTNLPEARIQV 249
>X17077-1|CAA34929.1| 202|Caenorhabditis elegans ceh-13 homeodomain
protein protein.
Length = 202
Score = 43.2 bits (97), Expect = 6e-05
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 63 SRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+RT FTT+QL ELE+ F +Y + R E+A L+L EA+V++
Sbjct: 117 NRTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQVKI 160
>AC006679-1|AAK84466.1| 202|Caenorhabditis elegans C.elegans
homeobox protein 13 protein.
Length = 202
Score = 43.2 bits (97), Expect = 6e-05
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 63 SRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+RT FTT+QL ELE+ F +Y + R E+A L+L EA+V++
Sbjct: 117 NRTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQVKI 160
>AC024847-9|AAR30201.1| 147|Caenorhabditis elegans C.elegans
homeobox protein 9 protein.
Length = 147
Score = 42.7 bits (96), Expect = 7e-05
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 52 IDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
I+ + K +++RTTF+ Q+ ELE+ F+ +Y R ELA RL+++E +V++
Sbjct: 62 IEKCQKTKRKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKI 116
>X52810-1|CAB57215.1| 67|Caenorhabditis elegans protein (
Caenorhabditis elegansceh-1 gene, unknown homeobox. ).
Length = 67
Score = 41.9 bits (94), Expect = 1e-04
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 60 VRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+RR+RT FT QL LE F ++Y V R LA++L+LSE +V++
Sbjct: 1 MRRARTAFTYEQLVALENKFKTSRYLSVVERLNLAIQLQLSETQVKI 47
>U55376-2|AAA98004.1| 132|Caenorhabditis elegans C.elegans homeobox
protein 1 protein.
Length = 132
Score = 41.9 bits (94), Expect = 1e-04
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 60 VRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+RR+RT FT QL LE F ++Y V R LA++L+LSE +V++
Sbjct: 1 MRRARTAFTYEQLVALENKFKTSRYLSVVERLNLAIQLQLSETQVKI 47
>Z73974-7|CAL90892.1| 283|Caenorhabditis elegans Hypothetical
protein F29F11.5c protein.
Length = 283
Score = 41.5 bits (93), Expect = 2e-04
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 50 EAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
E D RK R+ R FT Q +ELER F +Y RE LAM++ L+ +V++
Sbjct: 116 EEDDGTGKRKKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKI 172
>Z73974-6|CAL90891.1| 215|Caenorhabditis elegans Hypothetical
protein F29F11.5b protein.
Length = 215
Score = 41.5 bits (93), Expect = 2e-04
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 50 EAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
E D RK R+ R FT Q +ELER F +Y RE LAM++ L+ +V++
Sbjct: 48 EEDDGTGKRKKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKI 104
>Z73974-5|CAA98272.1| 346|Caenorhabditis elegans Hypothetical
protein F29F11.5a protein.
Length = 346
Score = 41.5 bits (93), Expect = 2e-04
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 50 EAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
E D RK R+ R FT Q +ELER F +Y RE LAM++ L+ +V++
Sbjct: 179 EEDDGTGKRKKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKI 235
>X52811-1|CAB57217.1| 60|Caenorhabditis elegans protein (
Caenorhabditis elegansceh-9 gene, unknown homeobox. ).
Length = 60
Score = 41.5 bits (93), Expect = 2e-04
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+++RTTF+ Q+ ELE+ F+ +Y R ELA RL+++E +V++
Sbjct: 2 KKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKI 47
>U10081-1|AAA20841.1| 346|Caenorhabditis elegans CEH-22
homeoprotein protein.
Length = 346
Score = 41.5 bits (93), Expect = 2e-04
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 50 EAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
E D RK R+ R FT Q +ELER F +Y RE LAM++ L+ +V++
Sbjct: 179 EEDDGTGKRKKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKI 235
>U10080-1|AAA20840.1| 346|Caenorhabditis elegans CEH-22
homeoprotein protein.
Length = 346
Score = 41.5 bits (93), Expect = 2e-04
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 50 EAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
E D RK R+ R FT Q +ELER F +Y RE LAM++ L+ +V++
Sbjct: 179 EEDDGTGKRKKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKI 235
>Z48621-10|CAA88539.1| 225|Caenorhabditis elegans Hypothetical
protein R07B1.1 protein.
Length = 225
Score = 41.1 bits (92), Expect = 2e-04
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
R+ RT F+T QL LER F QY + R E + L+L+E +V++
Sbjct: 130 RKPRTPFSTQQLISLERKFQSKQYLSIAERAEFSASLQLTETQVKI 175
>AY246429-1|AAO91836.1| 209|Caenorhabditis elegans homeodomain
protein CEH-2 protein.
Length = 209
Score = 41.1 bits (92), Expect = 2e-04
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RK +R RT F+ QL +LE+AF+ Y R++LA +L L+E +V+V
Sbjct: 124 RKNKRIRTAFSASQLIQLEKAFEGNHYVVGNERKQLAAKLSLTETQVKV 172
>AY246428-1|AAO91835.1| 209|Caenorhabditis elegans homeodomain
protein CEH-2 protein.
Length = 209
Score = 41.1 bits (92), Expect = 2e-04
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RK +R RT F+ QL +LE+AF+ Y R++LA +L L+E +V+V
Sbjct: 124 RKNKRIRTAFSASQLIQLEKAFEGNHYVVGNERKQLAAKLSLTETQVKV 172
>AF286218-1|AAF88063.1| 225|Caenorhabditis elegans VAB-15 protein.
Length = 225
Score = 41.1 bits (92), Expect = 2e-04
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
R+ RT F+T QL LER F QY + R E + L+L+E +V++
Sbjct: 130 RKPRTPFSTQQLISLERKFQSKQYLSIAERAEFSASLQLTETQVKI 175
>AF003137-4|AAB93639.2| 209|Caenorhabditis elegans C.elegans
homeobox protein 2 protein.
Length = 209
Score = 41.1 bits (92), Expect = 2e-04
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RK +R RT F+ QL +LE+AF+ Y R++LA +L L+E +V+V
Sbjct: 124 RKNKRIRTAFSASQLIQLEKAFEGNHYVVGNERKQLAAKLSLTETQVKV 172
>Z77133-5|CAB00867.3| 232|Caenorhabditis elegans Hypothetical
protein K03A11.3 protein.
Length = 232
Score = 40.3 bits (90), Expect = 4e-04
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 50 EAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+ I+ ++ R+ R FT +Q++ELE F K +Y REELA L L+ +V++
Sbjct: 125 DTINLRSQQQKRKPRVLFTQHQVNELEERFKKQRYVTATEREELAQCLGLTATQVKI 181
>AY205144-1|AAO46042.1| 156|Caenorhabditis elegans NK-2 family
homeodomain factorCEH-28 protein.
Length = 156
Score = 40.3 bits (90), Expect = 4e-04
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 50 EAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+ I+ ++ R+ R FT +Q++ELE F K +Y REELA L L+ +V++
Sbjct: 81 DTINLRSQQQKRKPRVLFTQHQVNELEERFKKQRYVTATEREELAQCLGLTATQVKI 137
>AF039720-2|AAB96698.1| 180|Caenorhabditis elegans C.elegans
homeobox protein 12 protein.
Length = 180
Score = 40.3 bits (90), Expect = 4e-04
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 59 KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
K+RR RT F++ QL +LE+ F +Y R +LA +L LSE ++++
Sbjct: 109 KMRRPRTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKI 156
>Z66494-8|CAA91264.1| 84|Caenorhabditis elegans Hypothetical
protein C34C6.8 protein.
Length = 84
Score = 39.9 bits (89), Expect = 5e-04
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 59 KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
++ R RTTFT QL+ LE F ++QY RE LA L L E +V++
Sbjct: 22 RIPRRRTTFTVEQLYLLEMYFAQSQYVGCDERERLARILSLDEYQVKI 69
>AF091459-1|AAC36745.1| 84|Caenorhabditis elegans homeodomain
protein CEH-7 protein.
Length = 84
Score = 39.9 bits (89), Expect = 5e-04
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 59 KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
++ R RTTFT QL+ LE F ++QY RE LA L L E +V++
Sbjct: 22 RIPRRRTTFTVEQLYLLEMYFAQSQYVGCDERERLARILSLDEYQVKI 69
>Z73428-3|CAA97809.1| 247|Caenorhabditis elegans Hypothetical
protein M142.4 protein.
Length = 247
Score = 39.5 bits (88), Expect = 7e-04
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 59 KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
++RR RT F+ Q+ LER F K Y TR ELA L L E ++V
Sbjct: 67 QMRRYRTAFSREQIGRLEREFAKENYVSRKTRGELAAELNLPEGTIKV 114
>Z32680-4|CAA83601.1| 273|Caenorhabditis elegans Hypothetical
protein C28A5.4 protein.
Length = 273
Score = 39.5 bits (88), Expect = 7e-04
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+K+R+ RT + + QL L++ F KTQY + R LA L LS+ +V++
Sbjct: 100 KKMRKPRTIYNSSQLQMLQKKFQKTQYLALPDRAALAHELGLSQTQVKI 148
>X96636-1|CAA65441.1| 263|Caenorhabditis elegans vab-7 protein.
Length = 263
Score = 39.5 bits (88), Expect = 7e-04
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 59 KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
++RR RT F+ Q+ LER F K Y TR ELA L L E ++V
Sbjct: 83 QMRRYRTAFSREQIGRLEREFAKENYVSRKTRGELAAELNLPEGTIKV 130
>AJ312288-1|CAC41972.1| 278|Caenorhabditis elegans putative
transcription factor protein.
Length = 278
Score = 39.5 bits (88), Expect = 7e-04
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+K+R+ RT + + QL L++ F KTQY + R LA L LS+ +V++
Sbjct: 105 KKMRKPRTIYNSSQLQMLQKKFQKTQYLALPDRAALAHELGLSQTQVKI 153
>Z48783-8|CAA88702.2| 308|Caenorhabditis elegans Hypothetical
protein F27E5.2 protein.
Length = 308
Score = 39.1 bits (87), Expect = 9e-04
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARV 104
RR+RT+FT QL LE AF YP RE ++ LSE ++
Sbjct: 188 RRNRTSFTAEQLDVLENAFRADTYPHANARESISKETGLSEEKI 231
>Z48582-6|CAA88468.2| 308|Caenorhabditis elegans Hypothetical
protein F27E5.2 protein.
Length = 308
Score = 39.1 bits (87), Expect = 9e-04
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARV 104
RR+RT+FT QL LE AF YP RE ++ LSE ++
Sbjct: 188 RRNRTSFTAEQLDVLENAFRADTYPHANARESISKETGLSEEKI 231
>U55856-2|AAA98021.1| 197|Caenorhabditis elegans Touch abnormal
protein 1 protein.
Length = 197
Score = 38.3 bits (85), Expect = 0.002
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
R++RT F+ QL LER F+ +Y R ELA L LSE +V+
Sbjct: 121 RKARTVFSDQQLQGLERRFESQRYLSTPERIELANALNLSETQVK 165
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 37.5 bits (83), Expect = 0.003
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELS 100
R +RT FT +QL L++ FDK YP E L+ +L+LS
Sbjct: 1040 RANRTRFTDFQLRTLQQFFDKQAYPKDDDLEALSKKLQLS 1079
>L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeobox
protein 16 protein.
Length = 187
Score = 36.3 bits (80), Expect = 0.006
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 54 AGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+G + +R RT FT QL L+ F +++Y R+ELA L L+E+++++
Sbjct: 81 SGSSEEEKRPRTAFTGDQLDRLKTEFRESRYLTEKRRQELAHELGLNESQIKI 133
>AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene 16
protein.
Length = 187
Score = 36.3 bits (80), Expect = 0.006
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 54 AGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+G + +R RT FT QL L+ F +++Y R+ELA L L+E+++++
Sbjct: 81 SGSSEEEKRPRTAFTGDQLDRLKTEFRESRYLTEKRRQELAHELGLNESQIKI 133
>Z81085-1|CAB03112.3| 263|Caenorhabditis elegans Hypothetical
protein F46F3.1 protein.
Length = 263
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
R+ R F+ Q+H LER F +Y RE LA + LS +V++
Sbjct: 99 RKRRVLFSPQQVHVLERKFQINRYLSAADRENLAKSINLSATQVKI 144
>Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical
protein F55B12.1 protein.
Length = 299
Score = 35.1 bits (77), Expect = 0.015
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
R+ R F+ Q++ELER F + +Y RE+LA + L+ +V++
Sbjct: 151 RKRRVLFSQAQVYELERRFKQAKYLTAPEREQLANSIRLTPTQVKI 196
>U49944-3|AAM51525.1| 341|Caenorhabditis elegans Mesodermal lineage
specificationprotein 2 protein.
Length = 341
Score = 35.1 bits (77), Expect = 0.015
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 53 DAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
D + RK +++RT F+ Q+ +LE F+ +Y R LA +L L+E +V++
Sbjct: 195 DPSQNRK-KKTRTVFSRSQVSQLEMMFECKRYLSSQERSNLAQKLHLTETQVKI 247
>U41545-3|ABN43093.1| 152|Caenorhabditis elegans Hypothetical
protein C02F12.10 protein.
Length = 152
Score = 35.1 bits (77), Expect = 0.015
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 57 PRKVRR--SRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
P++ R RTTFT+ Q+ LE F K +Y R ELA +EL+E +V+
Sbjct: 36 PKRSNRPTKRTTFTSEQVTLLELEFAKNEYICKDRRGELAQTIELTECQVK 86
>AF026056-1|AAB81844.1| 298|Caenorhabditis elegans NK-2 class
homeodomain protein protein.
Length = 298
Score = 35.1 bits (77), Expect = 0.015
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
R+ R F+ Q++ELER F + +Y RE+LA + L+ +V++
Sbjct: 151 RKRRVLFSQAQVYELERRFKQAKYLTAPEREQLANSIRLTPTQVKI 196
>AL031620-3|CAA20928.1| 310|Caenorhabditis elegans Hypothetical
protein C18B12.3 protein.
Length = 310
Score = 34.3 bits (75), Expect = 0.026
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
RR RT FT Q LE +F ++ YPD ++ +A L++ E R+ V
Sbjct: 181 RRFRTNFTELQSTFLEDSFKESHYPDHKAKKYMADFLKIPEDRITV 226
>U41017-5|AAC48216.2| 495|Caenorhabditis elegans C.elegans homeobox
protein 21 protein.
Length = 495
Score = 33.5 bits (73), Expect = 0.045
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 50 EAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARV 104
E A R + V+ R TFT QL L+++F + P R++L+ LEL + V
Sbjct: 381 EPTPAKRKKTVKVIRLTFTETQLKSLQKSFQQNHRPTREMRQKLSATLELDFSTV 435
>L19249-1|AAC37167.1| 303|Caenorhabditis elegans homeobox protein
protein.
Length = 303
Score = 33.5 bits (73), Expect = 0.045
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
R++RT + T Q +LE F Y RE LA RL LS ++V++
Sbjct: 210 RKARTIYGTTQTQQLEDMFKGQMYVVGAERENLAQRLGLSPSQVRI 255
>L14429-3|AAA28218.1| 305|Caenorhabditis elegans C.elegans homeobox
protein 23 protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.045
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
R++RT + T Q +LE F Y RE LA RL LS ++V++
Sbjct: 212 RKARTIYGTTQTQQLEDMFKGQMYVVGAERENLAQRLGLSPSQVRI 257
>AJ427855-1|CAD20808.1| 495|Caenorhabditis elegans CEH-21 protein
protein.
Length = 495
Score = 33.5 bits (73), Expect = 0.045
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 50 EAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARV 104
E A R + V+ R TFT QL L+++F + P R++L+ LEL + V
Sbjct: 381 EPTPAKRKKTVKVIRLTFTETQLKSLQKSFQQNHRPTREMRQKLSATLELDFSTV 435
>AF023470-1|AAB86814.1| 183|Caenorhabditis elegans CEH-21 protein.
Length = 183
Score = 33.5 bits (73), Expect = 0.045
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 50 EAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARV 104
E A R + V+ R TFT QL L+++F + P R++L+ LEL + V
Sbjct: 69 EPTPAKRKKTVKVIRLTFTETQLKSLQKSFQQNHRPTREMRQKLSATLELDFSTV 123
>X17075-1|CAA34927.1| 75|Caenorhabditis elegans ceh-11 protein.
Length = 75
Score = 33.1 bits (72), Expect = 0.059
Identities = 13/46 (28%), Positives = 27/46 (58%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
++ R T+ YQ LE F ++ Y REEL ++ +L++ ++++
Sbjct: 3 KKGRQTYQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKI 48
>U56860-2|AAA98706.3| 225|Caenorhabditis elegans Defective pharynx
development protein2 protein.
Length = 225
Score = 33.1 bits (72), Expect = 0.059
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 57 PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
P+K + + FT Q LE FD +Y R++LA L LSE +V+
Sbjct: 132 PQKRKGGQIRFTNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQVK 180
>L19247-1|AAC37166.1| 223|Caenorhabditis elegans homeobox protein
protein.
Length = 223
Score = 33.1 bits (72), Expect = 0.059
Identities = 13/46 (28%), Positives = 27/46 (58%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
++ R T+ YQ LE F ++ Y REEL ++ +L++ ++++
Sbjct: 113 KKGRQTYQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKI 158
>L15201-6|AAP82660.1| 222|Caenorhabditis elegans Egg laying
defective protein 5,isoform c protein.
Length = 222
Score = 33.1 bits (72), Expect = 0.059
Identities = 13/46 (28%), Positives = 27/46 (58%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
++ R T+ YQ LE F ++ Y REEL ++ +L++ ++++
Sbjct: 112 KKGRQTYQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKI 157
>L15201-5|AAA27943.2| 219|Caenorhabditis elegans Egg laying
defective protein 5,isoform a protein.
Length = 219
Score = 33.1 bits (72), Expect = 0.059
Identities = 13/46 (28%), Positives = 27/46 (58%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
++ R T+ YQ LE F ++ Y REEL ++ +L++ ++++
Sbjct: 109 KKGRQTYQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKI 154
>L15201-4|AAN84878.1| 223|Caenorhabditis elegans Egg laying
defective protein 5,isoform b protein.
Length = 223
Score = 33.1 bits (72), Expect = 0.059
Identities = 13/46 (28%), Positives = 27/46 (58%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
++ R T+ YQ LE F ++ Y REEL ++ +L++ ++++
Sbjct: 113 KKGRQTYQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKI 158
>AY766389-1|AAV34757.1| 170|Caenorhabditis elegans PHA-2 protein.
Length = 170
Score = 33.1 bits (72), Expect = 0.059
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 57 PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
P+K + + FT Q LE FD +Y R++LA L LSE +V+
Sbjct: 77 PQKRKGGQIRFTNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQVK 125
>Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical
protein ZC247.3 protein.
Length = 405
Score = 31.5 bits (68), Expect = 0.18
Identities = 20/54 (37%), Positives = 24/54 (44%)
Query: 53 DAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
D K R RTT QL L+ AF T P RE+LA L+ +QV
Sbjct: 234 DDSNSAKRRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQV 287
>X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein
protein.
Length = 382
Score = 31.5 bits (68), Expect = 0.18
Identities = 20/54 (37%), Positives = 24/54 (44%)
Query: 53 DAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
D K R RTT QL L+ AF T P RE+LA L+ +QV
Sbjct: 211 DDSNSAKRRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQV 264
>U72348-1|AAB17273.1| 355|Caenorhabditis elegans putative
transcription factor LIM-4 protein.
Length = 355
Score = 31.5 bits (68), Expect = 0.18
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 59 KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
K +R RTTF QL L+ F++ PD E++A LS+ QV
Sbjct: 238 KTKRVRTTFAEDQLSVLQTYFNRDSNPDGADLEKIASMTGLSKRVTQV 285
>U39740-5|AAA80428.2| 355|Caenorhabditis elegans Lim domain family
protein 4 protein.
Length = 355
Score = 31.5 bits (68), Expect = 0.18
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 59 KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
K +R RTTF QL L+ F++ PD E++A LS+ QV
Sbjct: 238 KTKRVRTTFAEDQLSVLQTYFNRDSNPDGADLEKIASMTGLSKRVTQV 285
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 31.1 bits (67), Expect = 0.24
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 57 PRKVRRSR-TTFTTYQLHELERAFDKTQYPDVFT 89
PRKVR+ + TT TT E E +D+ +YP+V T
Sbjct: 2278 PRKVRKMKSTTTTTTTPAEPEYYYDEEEYPEVIT 2311
>M22751-1|AAA28106.1| 211|Caenorhabditis elegans protein (
C.elegans DNA-bindingprotein (mab5) mRNA, 3' end. ).
Length = 211
Score = 30.7 bits (66), Expect = 0.31
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+R+R T++ Q ELE+ F +Y R+E++ L L+E +V++
Sbjct: 129 KRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKI 174
>L15201-2|AAA27945.2| 200|Caenorhabditis elegans Male abnormal
protein 5 protein.
Length = 200
Score = 30.7 bits (66), Expect = 0.31
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+R+R T++ Q ELE+ F +Y R+E++ L L+E +V++
Sbjct: 118 KRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKI 163
>AF277990-1|AAG00458.1| 200|Caenorhabditis elegans MAB-5 protein.
Length = 200
Score = 30.7 bits (66), Expect = 0.31
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+R+R T++ Q ELE+ F +Y R+E++ L L+E +V++
Sbjct: 118 KRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKI 163
>Z46794-6|CAA86776.1| 416|Caenorhabditis elegans Hypothetical
protein R06F6.6 protein.
Length = 416
Score = 30.3 bits (65), Expect = 0.42
Identities = 19/47 (40%), Positives = 24/47 (51%)
Query: 59 KVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
K RR RTTF+ Q LE + Y R LA L+LSE +V+
Sbjct: 129 KSRRKRTTFSPEQATRLEAEYIGDSYMAREKRHLLAQSLKLSENQVK 175
>AL033514-1|CAA22081.2| 275|Caenorhabditis elegans Hypothetical
protein Y75B8A.1 protein.
Length = 275
Score = 29.9 bits (64), Expect = 0.55
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 60 VRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+R+ R +T Q ELE+ F Y R ELA L L+E +V++
Sbjct: 199 MRKKRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQVKI 245
>AF172092-1|AAD48876.1| 275|Caenorhabditis elegans homeodomain
protein PHP-3 protein.
Length = 275
Score = 29.9 bits (64), Expect = 0.55
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 60 VRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+R+ R +T Q ELE+ F Y R ELA L L+E +V++
Sbjct: 199 MRKKRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQVKI 245
>U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain family
protein 6 protein.
Length = 287
Score = 29.5 bits (63), Expect = 0.73
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+R RT Q + + AF+++ P RE+LA LS VQV
Sbjct: 164 KRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQV 209
>U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeobox
protein 14 protein.
Length = 351
Score = 29.1 bits (62), Expect = 0.96
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+R RTT + L L++A+ + P RE+LA L VQV
Sbjct: 181 KRPRTTISAKSLETLKQAYQTSSKPARHVREQLASETGLDMRVVQV 226
>AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox
protein CEH-14 protein.
Length = 351
Score = 29.1 bits (62), Expect = 0.96
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
+R RTT + L L++A+ + P RE+LA L VQV
Sbjct: 181 KRPRTTISAKSLETLKQAYQTSSKPARHVREQLASETGLDMRVVQV 226
>Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical
protein C40H5.5 protein.
Length = 409
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
++ +R RT+F +QL ++ F PD ++LA + L++ +QV
Sbjct: 290 QRSKRMRTSFKHHQLRAMKTYFALNHNPDAKDLKQLAAKTNLTKRVLQV 338
>U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative
transcription factor TTX-3 protein.
Length = 409
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 58 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
++ +R RT+F +QL ++ F PD ++LA + L++ +QV
Sbjct: 290 QRSKRMRTSFKHHQLRAMKTYFALNHNPDAKDLKQLAAKTNLTKRVLQV 338
>Z46241-10|CAH19082.1| 268|Caenorhabditis elegans Hypothetical
protein C38D4.6b protein.
Length = 268
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/51 (25%), Positives = 27/51 (52%)
Query: 56 RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
R R + R ++ YQ ELE+ F + + + +L+ L L+E ++++
Sbjct: 200 RVRTADKYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKI 250
>Z46241-9|CAA86322.2| 270|Caenorhabditis elegans Hypothetical
protein C38D4.6a protein.
Length = 270
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/51 (25%), Positives = 27/51 (52%)
Query: 56 RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
R R + R ++ YQ ELE+ F + + + +L+ L L+E ++++
Sbjct: 202 RVRTADKYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKI 252
>X62782-1|CAA44619.1| 208|Caenorhabditis elegans pal-1 protein.
Length = 208
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/51 (25%), Positives = 27/51 (52%)
Query: 56 RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
R R + R ++ YQ ELE+ F + + + +L+ L L+E ++++
Sbjct: 140 RVRTADKYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKI 190
>X57140-1|CAA40419.1| 71|Caenorhabditis elegans ceh-3 protein.
Length = 71
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/51 (25%), Positives = 27/51 (52%)
Query: 56 RPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQV 106
R R + R ++ YQ ELE+ F + + + +L+ L L+E ++++
Sbjct: 5 RVRTADKYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKI 55
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans homeobox
protein 44,isoform a protein.
Length = 1273
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 64 RTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQ 105
RT T YQ L F Q+P E+++++L++S VQ
Sbjct: 1107 RTVITDYQKDTLRFVFVNEQHPSNELCEQISLKLDMSLRTVQ 1148
>AF106584-6|AAC78220.1| 424|Caenorhabditis elegans Hypothetical
protein F54A5.1 protein.
Length = 424
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 48 QLEAIDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELA 94
+LE G RR R F + LE F +T +PD+ R E+A
Sbjct: 203 RLETNGDGELIPQRRERYVFRPILIRMLESFFTQTPFPDLPRRVEIA 249
>Z81545-5|CAB04440.1| 389|Caenorhabditis elegans Hypothetical
protein F49H6.5 protein.
Length = 389
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 71 QLHELERAFDKTQYPDVFTREELAMRLELSE 101
++ E+ERA + + D+F RE +R+ L+E
Sbjct: 52 KIQEIERAKGQLPFFDMFMREHTYLRISLTE 82
>U70857-8|AAB09173.2| 256|Caenorhabditis elegans C.elegans homeobox
protein 34 protein.
Length = 256
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 67 FTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARV 104
F + + L A+ K QYP V + LA + ELS +V
Sbjct: 141 FKSKSRNVLRDAYKKCQYPSVEDKRRLAQQTELSIIQV 178
>U41550-4|AAP31434.2| 514|Caenorhabditis elegans Hypothetical
protein R04A9.5 protein.
Length = 514
Score = 26.2 bits (55), Expect = 6.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 75 LERAFDKTQYPDVFTREELAMRLELSEARVQ 105
L + F K P V RE++A +L LSE +V+
Sbjct: 406 LNKYFAKNNKPGVRQREKIAKKLGLSERQVR 436
>U28993-8|AAK31496.1| 632|Caenorhabditis elegans C.elegans homeobox
protein 38,isoform a protein.
Length = 632
Score = 26.2 bits (55), Expect = 6.8
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELA--MRLELS 100
+R R FT Q L+ F +TQ P ++ +A +RL+LS
Sbjct: 419 KRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLS 460
>U28993-7|AAL27244.1| 641|Caenorhabditis elegans C.elegans homeobox
protein 38,isoform b protein.
Length = 641
Score = 26.2 bits (55), Expect = 6.8
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 61 RRSRTTFTTYQLHELERAFDKTQYPDVFTREELA--MRLELS 100
+R R FT Q L+ F +TQ P ++ +A +RL+LS
Sbjct: 428 KRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLS 469
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.132 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,713,383
Number of Sequences: 27539
Number of extensions: 38775
Number of successful extensions: 219
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 106
Number of HSP's gapped (non-prelim): 114
length of query: 124
length of database: 12,573,161
effective HSP length: 73
effective length of query: 51
effective length of database: 10,562,814
effective search space: 538703514
effective search space used: 538703514
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)
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