GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000210-TA|BGIBMGA000210-PA|undefined
         (222 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9TY01 Cluster: Prion-like-(Q/n-rich)-domain-bearing pr...    35   1.8  
UniRef50_Q16XM4 Cluster: Cell adhesion molecule; n=2; Culicidae|...    34   3.2  
UniRef50_A2Y9U0 Cluster: Putative uncharacterized protein; n=1; ...    33   4.2  
UniRef50_Q6K422 Cluster: Putative uncharacterized protein P0523B...    33   5.6  
UniRef50_A5K8B6 Cluster: Putative uncharacterized protein; n=1; ...    33   7.4  
UniRef50_A6GG19 Cluster: Putative uncharacterized protein; n=2; ...    32   9.8  
UniRef50_A2Q7F3 Cluster: Similarity to isoamyl alcohol oxidase m...    32   9.8  

>UniRef50_Q9TY01 Cluster: Prion-like-(Q/n-rich)-domain-bearing
           protein protein 16; n=1; Caenorhabditis elegans|Rep:
           Prion-like-(Q/n-rich)-domain-bearing protein protein 16
           - Caenorhabditis elegans
          Length = 328

 Score = 34.7 bits (76), Expect = 1.8
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 5/81 (6%)

Query: 3   TVKVIADLTCLGACSANCSAGGEECGLGSGCPSEQTHFPAEVTSAGLRSRENSIKEGSNV 62
           T+   AD  C+  C A C A    CG+ +G   +Q+  PA  T A +  R       SN 
Sbjct: 102 TIANNADTNCISQCQAKCQA---RCGIQNGMGFQQS--PATTTDAPIVIRLEITSGSSNS 156

Query: 63  SCNFTFYQQGEIKFWFRNQNT 83
            C     QQ   +   +NQ T
Sbjct: 157 QCAPKCIQQCNNQCASQNQKT 177


>UniRef50_Q16XM4 Cluster: Cell adhesion molecule; n=2;
           Culicidae|Rep: Cell adhesion molecule - Aedes aegypti
           (Yellowfever mosquito)
          Length = 1019

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)

Query: 12  CLGACSANCSAGGEECGLGSGCPSEQTHFPAEVTSAGLRSRENSIKEGSNVSCNFT---F 68
           C  AC      G +E    S    EQ  FP  V++ G RS  +  + G +   N T    
Sbjct: 783 CCVACRKKRGPGADETDAKSHIQVEQNGFPGAVSNGGPRSHHHKSRNGISARMNITPNPL 842

Query: 69  YQQGEIKFWFRNQNTVTPNFTYPEPQRVS 97
            Q G+     +N+N +   F   +P R +
Sbjct: 843 AQDGD-----KNRNVMELRFLPTKPPRAT 866


>UniRef50_A2Y9U0 Cluster: Putative uncharacterized protein; n=1;
          Oryza sativa (indica cultivar-group)|Rep: Putative
          uncharacterized protein - Oryza sativa subsp. indica
          (Rice)
          Length = 190

 Score = 33.5 bits (73), Expect = 4.2
 Identities = 16/46 (34%), Positives = 22/46 (47%)

Query: 13 LGACSANCSAGGEECGLGSGCPSEQTHFPAEVTSAGLRSRENSIKE 58
          LG+  A   AGG + G G G P+   H P +   A    R+ S +E
Sbjct: 5  LGSQPAGVGAGGRDSGHGGGAPTSSAHAPIDDEEAPAAHRQASSRE 50


>UniRef50_Q6K422 Cluster: Putative uncharacterized protein
          P0523B07.9; n=1; Oryza sativa (japonica
          cultivar-group)|Rep: Putative uncharacterized protein
          P0523B07.9 - Oryza sativa subsp. japonica (Rice)
          Length = 155

 Score = 33.1 bits (72), Expect = 5.6
 Identities = 15/51 (29%), Positives = 24/51 (47%)

Query: 24 GEECGLGSGCPSEQTHFPAEVTSAGLRSRENSIKEGSNVSCNFTFYQQGEI 74
          G  CG G G  + +   PA  TS G + R  ++   + + C     QQG++
Sbjct: 22 GSGCGYGDGGRAARVLDPAAPTSGGGKGRPKTVDRTAKIECEMLEEQQGKL 72


>UniRef50_A5K8B6 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 1748

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 14/62 (22%), Positives = 28/62 (45%)

Query: 157  WRRRLELEKKIKEDQASPGNYSVMCSNPNRLLQTQPGDVTRGYSDDLPPTDETELTYEVP 216
            W    + EK + ++ A PG+   +CS+ N  ++            +LP  ++  L Y++ 
Sbjct: 1064 WMGNSQQEKSLGKNMALPGDTDTLCSSANPFVEDAANSALHWEGSNLPHGEQHPLQYDII 1123

Query: 217  LR 218
             R
Sbjct: 1124 YR 1125


>UniRef50_A6GG19 Cluster: Putative uncharacterized protein; n=2;
           Plesiocystis pacifica SIR-1|Rep: Putative
           uncharacterized protein - Plesiocystis pacifica SIR-1
          Length = 448

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 3/35 (8%)

Query: 12  CLGACSANCSAGGE-ECG--LGSGCPSEQTHFPAE 43
           C G+CSANC    E E G   G  C  E T+ PAE
Sbjct: 241 CAGSCSANCEGTCELEAGGECGGRCEGECTYMPAE 275


>UniRef50_A2Q7F3 Cluster: Similarity to isoamyl alcohol oxidase mreA
           - Aspergillus oryzae precursor; n=2; Trichocomaceae|Rep:
           Similarity to isoamyl alcohol oxidase mreA - Aspergillus
           oryzae precursor - Aspergillus niger
          Length = 661

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 72  GEIKFWFRNQNTVTPNFTYPEPQRVSIPWL-RRNQLQLQLTALW 114
           GE  + FR  + V PN T PE Q +  PW    N L +  T ++
Sbjct: 418 GETDYNFRMVSFVAPNMTVPETQNLLKPWFDTLNSLNVSFTPIY 461


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.133    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 252,624,790
Number of Sequences: 1657284
Number of extensions: 9867083
Number of successful extensions: 20678
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 20671
Number of HSP's gapped (non-prelim): 11
length of query: 222
length of database: 575,637,011
effective HSP length: 98
effective length of query: 124
effective length of database: 413,223,179
effective search space: 51239674196
effective search space used: 51239674196
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 70 (32.3 bits)