GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000210-TA|BGIBMGA000210-PA|undefined
         (222 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051494-1|AAK92918.1|  818|Drosophila melanogaster GH14774p pro...    30   2.2  
AF313621-1|AAL78208.1|  818|Drosophila melanogaster CTCF protein.      30   2.2  
AE014296-1240|AAF50573.2|  818|Drosophila melanogaster CG8591-PA...    30   2.2  

>AY051494-1|AAK92918.1|  818|Drosophila melanogaster GH14774p
           protein.
          Length = 818

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 153 IHRTWRRRLELEKKIKEDQASPG--NYSVMCSNPNRLLQTQPGDVTRGYSDDLPPTD 207
           I  T +++ EL+KK+K+  A PG    SV+ +  N+ +  +P   T   +   PP +
Sbjct: 95  IKTTPKKQKELQKKLKQAAAKPGKATRSVVSTATNKSINLRPAKSTPKATTSKPPPE 151


>AF313621-1|AAL78208.1|  818|Drosophila melanogaster CTCF protein.
          Length = 818

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 153 IHRTWRRRLELEKKIKEDQASPG--NYSVMCSNPNRLLQTQPGDVTRGYSDDLPPTD 207
           I  T +++ EL+KK+K+  A PG    SV+ +  N+ +  +P   T   +   PP +
Sbjct: 95  IKTTPKKQKELQKKLKQAAAKPGKATRSVVSTATNKSINLRPAKSTPKATTSKPPPE 151


>AE014296-1240|AAF50573.2|  818|Drosophila melanogaster CG8591-PA
           protein.
          Length = 818

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 153 IHRTWRRRLELEKKIKEDQASPG--NYSVMCSNPNRLLQTQPGDVTRGYSDDLPPTD 207
           I  T +++ EL+KK+K+  A PG    SV+ +  N+ +  +P   T   +   PP +
Sbjct: 95  IKTTPKKQKELQKKLKQAAAKPGKATRSVVSTATNKSINLRPAKSTPKATTSKPPPE 151


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.318    0.133    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,550,765
Number of Sequences: 52641
Number of extensions: 479278
Number of successful extensions: 1279
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1279
Number of HSP's gapped (non-prelim): 3
length of query: 222
length of database: 24,830,863
effective HSP length: 82
effective length of query: 140
effective length of database: 20,514,301
effective search space: 2872002140
effective search space used: 2872002140
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)