Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000204-TA|BGIBMGA000204-PA|IPR003822|Paired amphipathic
helix, IPR013194|Histone deacetylase interacting
(1039 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY706204-1|AAU01916.1| 1162|Homo sapiens SIN3B long isoform prot... 407 e-112
AK027559-1|BAB55197.1| 1026|Homo sapiens protein ( Homo sapiens ... 382 e-105
AF418569-1|AAP97288.1| 1273|Homo sapiens MSIN3A protein. 382 e-105
AK096477-1|BAC04801.1| 810|Homo sapiens protein ( Homo sapiens ... 360 2e-98
AB014600-1|BAA31675.2| 1137|Homo sapiens KIAA0700 protein protein. 324 1e-87
AY044430-1|AAK95854.1| 621|Homo sapiens transcriptional co-repr... 208 1e-52
AK074903-1|BAC11280.1| 573|Homo sapiens protein ( Homo sapiens ... 155 8e-37
BC110821-1|AAI10822.1| 353|Homo sapiens SIN3B protein protein. 146 5e-34
BC063531-1|AAH63531.1| 353|Homo sapiens SIN3B protein protein. 146 5e-34
BC025026-1|AAH25026.1| 352|Homo sapiens SIN3B protein protein. 146 5e-34
BC018973-1|AAH18973.1| 417|Homo sapiens SIN3A protein protein. 38 0.19
AL117513-1|CAB55972.1| 361|Homo sapiens hypothetical protein pr... 38 0.19
BC005113-1|AAH05113.1| 420|Homo sapiens SIN3B protein protein. 35 1.7
AF086762-1|AAF28400.1| 1111|Homo sapiens C11orf9 protein. 35 1.7
AB023171-1|BAA76798.2| 1183|Homo sapiens KIAA0954 protein protein. 35 1.7
BC117557-1|AAI17558.1| 1098|Homo sapiens GON4L protein protein. 33 5.3
BC064933-1|AAH64933.1| 719|Homo sapiens GON4L protein protein. 33 5.3
AY335491-1|AAR01261.1| 2241|Homo sapiens GON4L isoform C protein. 33 5.3
AY335490-1|AAR01260.1| 2241|Homo sapiens GON4L isoform A protein. 33 5.3
AL162734-1|CAH71640.1| 1078|Homo sapiens novel protein protein. 33 5.3
AL139128-1|CAH69942.1| 1078|Homo sapiens novel protein protein. 33 5.3
AK000210-1|BAA91011.1| 697|Homo sapiens protein ( Homo sapiens ... 33 5.3
AB195687-1|BAF51556.1| 2240|Homo sapiens YY1AP-related protein1 ... 33 5.3
AB046826-1|BAB13432.1| 1095|Homo sapiens KIAA1606 protein protein. 33 5.3
L06845-1|AAA73901.1| 595|Homo sapiens cysteinyl-tRNA synthetase... 33 7.0
BT009913-1|AAP88915.1| 748|Homo sapiens cysteinyl-tRNA syntheta... 33 7.0
BC002880-1|AAH02880.1| 748|Homo sapiens cysteinyl-tRNA syntheta... 33 7.0
AK222614-1|BAD96334.1| 726|Homo sapiens cysteine-tRNA ligase is... 33 7.0
AF288207-1|AAG00579.1| 726|Homo sapiens cysteinyl-tRNA syntheta... 33 7.0
AF288206-1|AAG00578.1| 748|Homo sapiens cytoplasmic cysteinyl-t... 33 7.0
AB208814-1|BAD92051.1| 281|Homo sapiens cysteine-tRNA ligase is... 33 7.0
>AY706204-1|AAU01916.1| 1162|Homo sapiens SIN3B long isoform
protein.
Length = 1162
Score = 407 bits (1002), Expect = e-112
Identities = 238/546 (43%), Positives = 309/546 (56%), Gaps = 32/546 (5%)
Query: 206 EFNHAIEYVNKIKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQTEQEVYSQVAKL 265
EFN+AI YVNKIK+RF P+ Y+ FLEILH YQ+ + + + +E+EV+++VA L
Sbjct: 161 EFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVANL 220
Query: 266 FEHQEDLLAEFGQFLPDAKA--VTKPEPAHEHHPMTFPTXXXXXXXXXXXXXXCLSGATV 323
F QEDLL+EFGQFLP+AK T P H L +
Sbjct: 221 FRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTPEHSRKRSRPSLLRPVSA 280
Query: 324 -----------RDVSYSEAAKLATIHDYSFFERARKALRSQQVYDNFLRCLLLFTNEIIS 372
+D+S + K T+ ++SFF++ R+ L+SQ+VY+NFLRC+ LF E++S
Sbjct: 281 PAKKKMKLRGTKDLSIAAVGKYGTLQEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVS 340
Query: 373 SSELLSVTSPFLCRHPELQRWLHDFVGXXXXXXXXXXXXXXGYPWTNPIPVEPRPRY-ES 431
SELL + SPFL + PEL F+G G + I R S
Sbjct: 341 GSELLQLVSPFLGKFPELFAQFKSFLGVKELSFAPPMSDRSGDGISREIDYASCKRIGSS 400
Query: 432 VGALGAQMRNDRPQGDMAMDIDLSTCKRLGTSYCALPREAAARKCSGRTPLCKEVLNDTW 491
AL + + G A+ +L L S+ + + VLNDTW
Sbjct: 401 YRALPKTYQQPKCSGRTAICKELDHWTLLQGSWTDDYCMSKFKNTCWIPGYSAGVLNDTW 460
Query: 492 VSFPTWSEDSTFVTSRKTQYEEYIYRCEDERFELDVVIETNAATIRVLEGVQKKLSRMSG 551
VSFP+WSEDSTFV+S+KT YEE ++RCEDERFELDVV+ETN ATIRVLE VQKKLSRM+
Sbjct: 461 VSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAP 520
Query: 552 EDAARYRLDDCLGGHSPTVHQRALRRIYGDKVAVDIIAGXXXXXXXXXXXXXXXXXXKEE 611
ED ++RLDD LGG S + +RA+ RIYGDK A +II KEE
Sbjct: 521 EDQEKFRLDDSLGGTSEVIQRRAIYRIYGDK-APEIIESLKKNPVTAVPVVLKRLKAKEE 579
Query: 612 EWREAQKGFNKQWREQNEKYYLKSLDHQGINFKQNDLKAMRSKTLFNEVESAY------- 664
EWREAQ+GFNK WREQ EK YLKSLDHQ +NFKQND KA+RSK+L NE+ES Y
Sbjct: 580 EWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQH 639
Query: 665 ----AARRPGPHLVVDYNMQSRQEAIKIVRDTAELLIHHARRQTAIQKAEKRRIKQLLRH 720
+A PHL+ Y + RQ I+ D A L+ ++ +RQ AIQK ++ I QLL
Sbjct: 640 SEGRSAPSSEPHLIFVY--EDRQ----ILEDAAALISYYVKRQPAIQKEDQGTIHQLLHQ 693
Query: 721 FLPDLF 726
F+P LF
Sbjct: 694 FVPSLF 699
Score = 123 bits (296), Expect = 4e-27
Identities = 54/83 (65%), Positives = 67/83 (80%)
Query: 51 VEDALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGVITRVSNLFKGHPELIVGF 110
VEDAL+YLDQVK +F + P YN FL+IMKEFKSQ+IDTPGVI RVS LF HP+LIVGF
Sbjct: 41 VEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGF 100
Query: 111 NTFLPPGYKIEVQSNGQVSVSMP 133
N FLP GY+I++ NG++++ P
Sbjct: 101 NAFLPLGYRIDIPKNGKLNIQSP 123
Score = 53.2 bits (122), Expect = 5e-06
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 49 LKVEDALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPG----------VITRVSN 98
++ +A+SY++++K +F P++Y FL+I+ ++ + ++T G V T V+N
Sbjct: 160 VEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVAN 219
Query: 99 LFKGHPELIVGFNTFLPPGYKIEVQSNG 126
LF+G +L+ F FLP + NG
Sbjct: 220 LFRGQEDLLSEFGQFLPEAKRSLFTGNG 247
Score = 37.5 bits (83), Expect = 0.25
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 210 AIEYVNKIKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQTEQEVYSQVAKLFEHQ 269
A+ Y++++K RF P Y FLEI +KE +++ V +V++LF
Sbjct: 44 ALTYLDQVKIRFGSDPATYNGFLEI----------MKEFKSQSIDTPGVIRRVSQLFHEH 93
Query: 270 EDLLAEFGQFLP 281
DL+ F FLP
Sbjct: 94 PDLIVGFNAFLP 105
Score = 34.7 bits (76), Expect = 1.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 912 EYYXXXXXXXXXXXXXXMESSAFEDAAREMLGIKAYPAYTLDKLV 956
EYY ++ + +ED REM I AY +T+DKLV
Sbjct: 846 EYYPAFLDMVRSLLEGSIDPTQYEDTLREMFTIHAYVGFTMDKLV 890
>AK027559-1|BAB55197.1| 1026|Homo sapiens protein ( Homo sapiens
cDNA FLJ14653 fis, clone NT2RP2002252, highly similar to
Mus musculus (clone pVZmSin3A9) mSin3A9 mRNA. ).
Length = 1026
Score = 382 bits (941), Expect = e-105
Identities = 212/423 (50%), Positives = 270/423 (63%), Gaps = 48/423 (11%)
Query: 323 VRDVSYSEAAKLATIHDYSFFERARKALRSQQVYDNFLRCLLLFTNEIISSSELLSVTSP 382
++D S ++A+K + FF++ RKALRS + Y+NFLRCL +I + E++S
Sbjct: 447 LKDSSMADASKHGGGTESLFFDKVRKALRSAEAYENFLRCL------VIFNQEVIS---- 496
Query: 383 FLCRHPELQRWLHDFVGXXXXXXXXXXXXXXGYPWTNPIPVEPRPRYESVGALGAQMRND 442
EL + + F+G GY + +E P+ +
Sbjct: 497 ----RAELVQLVSPFLGKFPELFNWFKNFL-GYK--ESVHLETYPK-------------E 536
Query: 443 RPQGDMAMDIDLSTCKRLGTSYCALPREAAARKCSGRTPLCKEVLNDTWVSFPTWSEDST 502
R +AM+ID ++CKRLG+SY ALP+ KC+GRTPLCKEVLNDTWVSFP+WSEDST
Sbjct: 537 RATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDST 596
Query: 503 FVTSRKTQYEEYIYRCEDERFELDVVIETNAATIRVLEGVQKKLSRMSGEDAARYRLDDC 562
FV+S+KTQYEE+IYRCEDERFELDVV+ETN ATIRVLE +QKKLSR+S E+ A++RLD+
Sbjct: 597 FVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNT 656
Query: 563 LGGHSPTVHQRALRRIYGDKVAVDIIAGXXXXXXXXXXXXXXXXXXKEEEWREAQKGFNK 622
LGG S +H++AL+RIY DK A DII G KEEEWREAQ+GFNK
Sbjct: 657 LGGTSEVIHRKALQRIYADK-AADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNK 715
Query: 623 QWREQNEKYYLKSLDHQGINFKQNDLKAMRSKTLFNEVESAYAARRP-----------GP 671
WREQNEKYYLKSLDHQGINFKQND K +RSK+L NE+ES Y R+ GP
Sbjct: 716 VWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGVPVGP 775
Query: 672 HLVVDYNMQSRQEAIKIVRDTAELLIHHARRQTAIQKAEKRRIKQLLRHFLPDLFSHPRQ 731
HL + Y E +I+ D A L+IHH +RQT IQK +K +IKQ++ HF+PDL R
Sbjct: 776 HLSLAY------EDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFAQRG 829
Query: 732 PLS 734
LS
Sbjct: 830 DLS 832
Score = 247 bits (604), Expect = 2e-64
Identities = 142/269 (52%), Positives = 163/269 (60%), Gaps = 28/269 (10%)
Query: 45 QFQRLKVEDALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGVITRVSNLFKGHP 104
QFQRLKVEDALSYLDQVK +F +QPQVYNDFLDIMKEFKSQ+IDTPGVI+RVS LFKGHP
Sbjct: 117 QFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHP 176
Query: 105 ELIVGFNTFLPPGYKIEVQSNGQVSVSMPS-----PT-AIGSGVLLGVHHTQQPQL---- 154
+LI+GFNTFLPPGYKIEVQ+N V+V+ P PT I H QP
Sbjct: 177 DLIMGFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGIQPQPQPPPQHPSQPSAQSAP 236
Query: 155 VHLLPVP---------------HAEECRPVGPALQHLSHAAPDPALHHXXXXXXXXXXXX 199
P P H + P + S +P H
Sbjct: 237 APAQPAPQPPPAKVSKPSQLQAHTPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSL 296
Query: 200 XXXXXXEFNHAIEYVNKIKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQ---TEQ 256
EFNHAI YVNKIK+RF QPD YK FLEILH YQ+ R+ KE TEQ
Sbjct: 297 QNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQ 356
Query: 257 EVYSQVAKLFEHQEDLLAEFGQFLPDAKA 285
EVY+QVA+LF++QEDLL+EFGQFLPDA +
Sbjct: 357 EVYAQVARLFKNQEDLLSEFGQFLPDANS 385
Score = 37.9 bits (84), Expect = 0.19
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 912 EYYXXXXXXXXXXXXXXMESSAFEDAAREMLGIKAYPAYTLDKLVSIAV 960
+YY ++SS +ED+ REM I AY A+T+DKL+ V
Sbjct: 957 DYYPAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIV 1005
>AF418569-1|AAP97288.1| 1273|Homo sapiens MSIN3A protein.
Length = 1273
Score = 382 bits (941), Expect = e-105
Identities = 212/423 (50%), Positives = 270/423 (63%), Gaps = 48/423 (11%)
Query: 323 VRDVSYSEAAKLATIHDYSFFERARKALRSQQVYDNFLRCLLLFTNEIISSSELLSVTSP 382
++D S ++A+K + FF++ RKALRS + Y+NFLRCL +I + E++S
Sbjct: 447 LKDSSMADASKHGGGTESLFFDKVRKALRSAEAYENFLRCL------VIFNQEVIS---- 496
Query: 383 FLCRHPELQRWLHDFVGXXXXXXXXXXXXXXGYPWTNPIPVEPRPRYESVGALGAQMRND 442
EL + + F+G GY + +E P+ +
Sbjct: 497 ----RAELVQLVSPFLGKFPELFNWFKNFL-GYK--ESVHLETYPK-------------E 536
Query: 443 RPQGDMAMDIDLSTCKRLGTSYCALPREAAARKCSGRTPLCKEVLNDTWVSFPTWSEDST 502
R +AM+ID ++CKRLG+SY ALP+ KC+GRTPLCKEVLNDTWVSFP+WSEDST
Sbjct: 537 RATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDST 596
Query: 503 FVTSRKTQYEEYIYRCEDERFELDVVIETNAATIRVLEGVQKKLSRMSGEDAARYRLDDC 562
FV+S+KTQYEE+IYRCEDERFELDVV+ETN ATIRVLE +QKKLSR+S E+ A++RLD+
Sbjct: 597 FVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNT 656
Query: 563 LGGHSPTVHQRALRRIYGDKVAVDIIAGXXXXXXXXXXXXXXXXXXKEEEWREAQKGFNK 622
LGG S +H++AL+RIY DK A DII G KEEEWREAQ+GFNK
Sbjct: 657 LGGTSEVIHRKALQRIYADK-AADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNK 715
Query: 623 QWREQNEKYYLKSLDHQGINFKQNDLKAMRSKTLFNEVESAYAARRP-----------GP 671
WREQNEKYYLKSLDHQGINFKQND K +RSK+L NE+ES Y R+ GP
Sbjct: 716 VWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGVPVGP 775
Query: 672 HLVVDYNMQSRQEAIKIVRDTAELLIHHARRQTAIQKAEKRRIKQLLRHFLPDLFSHPRQ 731
HL + Y E +I+ D A L+IHH +RQT IQK +K +IKQ++ HF+PDL R
Sbjct: 776 HLSLAY------EDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFAQRG 829
Query: 732 PLS 734
LS
Sbjct: 830 DLS 832
Score = 247 bits (604), Expect = 2e-64
Identities = 142/269 (52%), Positives = 163/269 (60%), Gaps = 28/269 (10%)
Query: 45 QFQRLKVEDALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGVITRVSNLFKGHP 104
QFQRLKVEDALSYLDQVK +F +QPQVYNDFLDIMKEFKSQ+IDTPGVI+RVS LFKGHP
Sbjct: 117 QFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHP 176
Query: 105 ELIVGFNTFLPPGYKIEVQSNGQVSVSMPS-----PT-AIGSGVLLGVHHTQQPQL---- 154
+LI+GFNTFLPPGYKIEVQ+N V+V+ P PT I H QP
Sbjct: 177 DLIMGFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGIQPQPQPPPQHPSQPSAQSAP 236
Query: 155 VHLLPVP---------------HAEECRPVGPALQHLSHAAPDPALHHXXXXXXXXXXXX 199
P P H + P + S +P H
Sbjct: 237 APAQPAPQPPPAKVSKPSQLQAHTPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSL 296
Query: 200 XXXXXXEFNHAIEYVNKIKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQ---TEQ 256
EFNHAI YVNKIK+RF QPD YK FLEILH YQ+ R+ KE TEQ
Sbjct: 297 QNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQ 356
Query: 257 EVYSQVAKLFEHQEDLLAEFGQFLPDAKA 285
EVY+QVA+LF++QEDLL+EFGQFLPDA +
Sbjct: 357 EVYAQVARLFKNQEDLLSEFGQFLPDANS 385
Score = 37.9 bits (84), Expect = 0.19
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 912 EYYXXXXXXXXXXXXXXMESSAFEDAAREMLGIKAYPAYTLDKLVSIAV 960
+YY ++SS +ED+ REM I AY A+T+DKL+ V
Sbjct: 957 DYYPAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIV 1005
>AK096477-1|BAC04801.1| 810|Homo sapiens protein ( Homo sapiens
cDNA FLJ39158 fis, clone OCBBF2002086, highly similar to
Transcriptional regulator, SIN3A. ).
Length = 810
Score = 360 bits (885), Expect = 2e-98
Identities = 201/400 (50%), Positives = 255/400 (63%), Gaps = 48/400 (12%)
Query: 323 VRDVSYSEAAKLATIHDYSFFERARKALRSQQVYDNFLRCLLLFTNEIISSSELLSVTSP 382
++D S ++A+K + FF++ RKALRS + Y+NFLRCL +I + E++S
Sbjct: 447 LKDSSMADASKHGGGTESLFFDKVRKALRSAEAYENFLRCL------VIFNQEVIS---- 496
Query: 383 FLCRHPELQRWLHDFVGXXXXXXXXXXXXXXGYPWTNPIPVEPRPRYESVGALGAQMRND 442
EL + + F+G GY + +E P+ +
Sbjct: 497 ----RAELVQLVSPFLGKFPELFNWFKNFL-GYK--ESVHLETYPK-------------E 536
Query: 443 RPQGDMAMDIDLSTCKRLGTSYCALPREAAARKCSGRTPLCKEVLNDTWVSFPTWSEDST 502
R +AM+ID ++CKRLG+SY ALP+ KC+GRTPLCKEVLNDTWVSFP+WSEDST
Sbjct: 537 RATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDST 596
Query: 503 FVTSRKTQYEEYIYRCEDERFELDVVIETNAATIRVLEGVQKKLSRMSGEDAARYRLDDC 562
FV+S+KTQYEE+IYRCEDERFELDVV+ETN ATIRVLE +QKKLSR+S E+ A++RLD+
Sbjct: 597 FVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNT 656
Query: 563 LGGHSPTVHQRALRRIYGDKVAVDIIAGXXXXXXXXXXXXXXXXXXKEEEWREAQKGFNK 622
LGG S +H++AL+RIY DK A DII G KEEEWREAQ+GFNK
Sbjct: 657 LGGTSEVIHRKALQRIYADK-AADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNK 715
Query: 623 QWREQNEKYYLKSLDHQGINFKQNDLKAMRSKTLFNEVESAYAARRP-----------GP 671
WREQNEKYYLKSLDHQGINFKQND K +RSK+L NE+ES Y R+ GP
Sbjct: 716 VWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGVPVGP 775
Query: 672 HLVVDYNMQSRQEAIKIVRDTAELLIHHARRQTAIQKAEK 711
HL + Y E +I+ D A L+IHH +RQT IQK +K
Sbjct: 776 HLSLAY------EDKQILEDAAALIIHHVKRQTGIQKEDK 809
Score = 230 bits (563), Expect = 2e-59
Identities = 136/269 (50%), Positives = 157/269 (58%), Gaps = 28/269 (10%)
Query: 45 QFQRLKVEDALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGVITRVSNLFKGHP 104
QFQRLKVEDALSYLDQVK +F +QPQVYNDFLDIMKEFKSQ+IDTPGVI+RVS LFKGHP
Sbjct: 117 QFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHP 176
Query: 105 ELIVGFNTFLPPGYK--------IEVQSNGQVSV--------------SMPSPTAIGSGV 142
+LI+GFNTFLPPGYK + V + GQV PS + S
Sbjct: 177 DLIMGFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGTQPQPQPPPQHPSQPSAQSAP 236
Query: 143 LLGVHHTQQPQLVHLLPVP---HAEECRPVGPALQHLSHAAPDPALHHXXXXXXXXXXXX 199
Q P P H + P + S +P H
Sbjct: 237 APAQPAPQPPPAKVSKPSQLQAHTPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSL 296
Query: 200 XXXXXXEFNHAIEYVNKIKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQ---TEQ 256
EFNHAI YVNKIK+RF QPD YK FLEILH YQ+ R+ KE TEQ
Sbjct: 297 QNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQ 356
Query: 257 EVYSQVAKLFEHQEDLLAEFGQFLPDAKA 285
EVY+QVA+LF++QEDLL+EFGQFLPDA +
Sbjct: 357 EVYAQVARLFKNQEDLLSEFGQFLPDANS 385
>AB014600-1|BAA31675.2| 1137|Homo sapiens KIAA0700 protein protein.
Length = 1137
Score = 324 bits (795), Expect = 1e-87
Identities = 166/297 (55%), Positives = 205/297 (69%), Gaps = 18/297 (6%)
Query: 441 NDRPQGDMAMDIDLSTCKRLGTSYCALPREAAARKCSGRTPLCKEVLNDTWVSFPTWSED 500
+DR ++ +ID ++CKR+G+SY ALP+ KCSGRT +CKEVLNDTWVSFP+WSED
Sbjct: 385 SDRSGDGISREIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSED 444
Query: 501 STFVTSRKTQYEEYIYRCEDERFELDVVIETNAATIRVLEGVQKKLSRMSGEDAARYRLD 560
STFV+S+KT YEE ++RCEDERFELDVV+ETN ATIRVLE VQKKLSRM+ ED ++RLD
Sbjct: 445 STFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLD 504
Query: 561 DCLGGHSPTVHQRALRRIYGDKVAVDIIAGXXXXXXXXXXXXXXXXXXKEEEWREAQKGF 620
D LGG S + +RA+ RIYGDK A +II KEEEWREAQ+GF
Sbjct: 505 DSLGGTSEVIQRRAIYRIYGDK-APEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGF 563
Query: 621 NKQWREQNEKYYLKSLDHQGINFKQNDLKAMRSKTLFNEVESAY-----------AARRP 669
NK WREQ EK YLKSLDHQ +NFKQND KA+RSK+L NE+ES Y +A
Sbjct: 564 NKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHSEGRSAPSS 623
Query: 670 GPHLVVDYNMQSRQEAIKIVRDTAELLIHHARRQTAIQKAEKRRIKQLLRHFLPDLF 726
PHL+ Y + RQ I+ D A L+ ++ +RQ AIQK ++ I QLL F+P LF
Sbjct: 624 EPHLIFVY--EDRQ----ILEDAAALISYYVKRQPAIQKEDQGTIHQLLHQFVPSLF 674
Score = 154 bits (373), Expect = 2e-36
Identities = 86/209 (41%), Positives = 120/209 (57%), Gaps = 17/209 (8%)
Query: 206 EFNHAIEYVNKIKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQTEQEVYSQVAKL 265
EFN+AI YVNKIK+RF P+ Y+ FLEILH YQ+ + + + +E+EV+++VA L
Sbjct: 168 EFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVANL 227
Query: 266 FEHQEDLLAEFGQFLPDAK-------------AVTKPE--PAHEHHPMTFPTXXXXXXXX 310
F QEDLL+EFGQFLP+AK +V K E EH
Sbjct: 228 FRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTPEHSRKRSRPSLLRPVSA 287
Query: 311 XXXXXXCLSGATVRDVSYSEAAKLATIHDYSFFERARKALRSQQVYDNFLRCLLLFTNEI 370
L G +D+S + K T+ ++SFF++ R+ L+SQ+VY+NFLRC+ LF E+
Sbjct: 288 PAKKKMKLRG--TKDLSIAAVGKYGTLQEFSFFDKVRRVLKSQEVYENFLRCIALFNQEL 345
Query: 371 ISSSELLSVTSPFLCRHPELQRWLHDFVG 399
+S SELL + SPFL + PEL F+G
Sbjct: 346 VSGSELLQLVSPFLGKFPELFAQFKSFLG 374
Score = 123 bits (296), Expect = 4e-27
Identities = 54/83 (65%), Positives = 67/83 (80%)
Query: 51 VEDALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGVITRVSNLFKGHPELIVGF 110
VEDAL+YLDQVK +F + P YN FL+IMKEFKSQ+IDTPGVI RVS LF HP+LIVGF
Sbjct: 48 VEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGF 107
Query: 111 NTFLPPGYKIEVQSNGQVSVSMP 133
N FLP GY+I++ NG++++ P
Sbjct: 108 NAFLPLGYRIDIPKNGKLNIQSP 130
Score = 53.2 bits (122), Expect = 5e-06
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 49 LKVEDALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPG----------VITRVSN 98
++ +A+SY++++K +F P++Y FL+I+ ++ + ++T G V T V+N
Sbjct: 167 VEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVAN 226
Query: 99 LFKGHPELIVGFNTFLPPGYKIEVQSNG 126
LF+G +L+ F FLP + NG
Sbjct: 227 LFRGQEDLLSEFGQFLPEAKRSLFTGNG 254
Score = 37.5 bits (83), Expect = 0.25
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 210 AIEYVNKIKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQTEQEVYSQVAKLFEHQ 269
A+ Y++++K RF P Y FLEI +KE +++ V +V++LF
Sbjct: 51 ALTYLDQVKIRFGSDPATYNGFLEI----------MKEFKSQSIDTPGVIRRVSQLFHEH 100
Query: 270 EDLLAEFGQFLP 281
DL+ F FLP
Sbjct: 101 PDLIVGFNAFLP 112
Score = 34.7 bits (76), Expect = 1.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 912 EYYXXXXXXXXXXXXXXMESSAFEDAAREMLGIKAYPAYTLDKLV 956
EYY ++ + +ED REM I AY +T+DKLV
Sbjct: 821 EYYPAFLDMVRSLLEGSIDPTQYEDTLREMFTIHAYVGFTMDKLV 865
>AY044430-1|AAK95854.1| 621|Homo sapiens transcriptional
co-repressor Sin3A protein.
Length = 621
Score = 208 bits (507), Expect = 1e-52
Identities = 130/270 (48%), Positives = 153/270 (56%), Gaps = 29/270 (10%)
Query: 45 QFQRLKVEDALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGVITRVSNLFKGHP 104
QFQRLKVEDALSYLDQVK +F +QPQVYNDFLDIMKEFKSQ+IDTP VI+RVS+ KG P
Sbjct: 117 QFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPRVISRVSHYSKGPP 176
Query: 105 ELIVGF-NTFLPPGYKIEVQSNGQVSVSMPS-----PT-AIGSGVLLGVHHTQQPQL--- 154
LI+G + F P K+EVQ+N V+V+ P PT I H QP
Sbjct: 177 ILIMGIQHLFAPWATKMEVQTNDMVNVTTPGQVHQIPTHGIQPQPQPPPQHPSQPSAQSA 236
Query: 155 -VHLLPVP---------------HAEECRPVGPALQHLSHAAPDPALHHXXXXXXXXXXX 198
P P H + P + S +P H
Sbjct: 237 PAPAQPAPQPPPAKVSKPSQLQAHTPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPS 296
Query: 199 XXXXXXXEFNHAIEYVNKIKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQ---TE 255
EFNHAI YVNKIK+RF QPD YK FLEILH YQ+ R+ KE TE
Sbjct: 297 LQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTE 356
Query: 256 QEVYSQVAKLFEHQEDLLAEFGQFLPDAKA 285
QEVY+QVA+LF++QEDLL+EFGQFLPDA +
Sbjct: 357 QEVYAQVARLFKNQEDLLSEFGQFLPDANS 386
Score = 145 bits (351), Expect = 8e-34
Identities = 87/203 (42%), Positives = 120/203 (59%), Gaps = 30/203 (14%)
Query: 323 VRDVSYSEAAKLATIHDYSFFERARKALRSQQVYDNFLRCLLLFTNEIISSSELLSVTSP 382
++D S ++A+K + FF++ RKALRS + Y+NFLRCL +I + E++S
Sbjct: 448 LKDSSMADASKHGGGTESLFFDKVRKALRSAEAYENFLRCL------VIFNQEVIS---- 497
Query: 383 FLCRHPELQRWLHDFVGXXXXXXXXXXXXXXGYPWTNPIPVEPRPRYESVGALGAQMRND 442
EL + + F+G GY + +E P+ D
Sbjct: 498 ----RAELVQLVSPFLGKFPELFNWFKNFL-GYK--ESVHLETYPK-------------D 537
Query: 443 RPQGDMAMDIDLSTCKRLGTSYCALPREAAARKCSGRTPLCKEVLNDTWVSFPTWSEDST 502
R +AM+ID ++CKRLG+SY AL + KC+GRT +CKEVLNDTWVSFP+WSED T
Sbjct: 538 RATEGIAMEIDYASCKRLGSSYRALGKSYQQPKCTGRTGVCKEVLNDTWVSFPSWSEDCT 597
Query: 503 FVTSRKTQYEEYIYRCEDERFEL 525
FV+S+KTQYEE+IYRCEDERF+L
Sbjct: 598 FVSSKKTQYEEHIYRCEDERFDL 620
>AK074903-1|BAC11280.1| 573|Homo sapiens protein ( Homo sapiens
cDNA FLJ90422 fis, clone NT2RP3000378, weakly similar to
PAIRED AMPHIPATHIC HELIX PROTEIN. ).
Length = 573
Score = 155 bits (376), Expect = 8e-37
Identities = 79/137 (57%), Positives = 94/137 (68%), Gaps = 17/137 (12%)
Query: 609 KEEEWREAQKGFNKQWREQNEKYYLKSLDHQGINFKQNDLKAMRSKTLFNEVESAYAARR 668
KEEEWREAQ+GFNK WREQNEKYYLKSLDHQGINFKQND K +RSK+L NE+ES Y R+
Sbjct: 2 KEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQ 61
Query: 669 P-----------GPHLVVDYNMQSRQEAIKIVRDTAELLIHHARRQTAIQKAEKRRIKQL 717
GPHL + Y E +I+ D A L+IHH +RQT IQK +K +IKQ+
Sbjct: 62 EQATEENAGVPVGPHLSLAY------EDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQI 115
Query: 718 LRHFLPDLFSHPRQPLS 734
+ HF+PDL R LS
Sbjct: 116 MHHFIPDLLFAQRGDLS 132
Score = 37.9 bits (84), Expect = 0.19
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 912 EYYXXXXXXXXXXXXXXMESSAFEDAAREMLGIKAYPAYTLDKLVSIAV 960
+YY ++SS +ED+ REM I AY A+T+DKL+ V
Sbjct: 257 DYYPAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIV 305
>BC110821-1|AAI10822.1| 353|Homo sapiens SIN3B protein protein.
Length = 353
Score = 146 bits (353), Expect = 5e-34
Identities = 81/194 (41%), Positives = 113/194 (58%), Gaps = 17/194 (8%)
Query: 206 EFNHAIEYVNKIKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQTEQEVYSQVAKL 265
EFN+AI YVNKIK+RF P+ Y+ FLEILH YQ+ + + + +E+EV+++VA L
Sbjct: 161 EFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVANL 220
Query: 266 FEHQEDLLAEFGQFLPDAK-------------AVTKPE--PAHEHHPMTFPTXXXXXXXX 310
F QEDLL+EFGQFLP+AK +V K E EH
Sbjct: 221 FRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTPEHSRKRSRPSLLRPVSA 280
Query: 311 XXXXXXCLSGATVRDVSYSEAAKLATIHDYSFFERARKALRSQQVYDNFLRCLLLFTNEI 370
L G +D+S + K T+ ++SFF++ R+ L+SQ+VY+NFLRC+ LF E+
Sbjct: 281 PAKKKMKLRG--TKDLSIAAVGKYGTLQEFSFFDKVRRVLKSQEVYENFLRCIALFNQEL 338
Query: 371 ISSSELLSVTSPFL 384
+S SELL + SPFL
Sbjct: 339 VSGSELLQLVSPFL 352
Score = 123 bits (296), Expect = 4e-27
Identities = 54/83 (65%), Positives = 67/83 (80%)
Query: 51 VEDALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGVITRVSNLFKGHPELIVGF 110
VEDAL+YLDQVK +F + P YN FL+IMKEFKSQ+IDTPGVI RVS LF HP+LIVGF
Sbjct: 41 VEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGF 100
Query: 111 NTFLPPGYKIEVQSNGQVSVSMP 133
N FLP GY+I++ NG++++ P
Sbjct: 101 NAFLPLGYRIDIPKNGKLNIQSP 123
Score = 53.2 bits (122), Expect = 5e-06
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 49 LKVEDALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPG----------VITRVSN 98
++ +A+SY++++K +F P++Y FL+I+ ++ + ++T G V T V+N
Sbjct: 160 VEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVAN 219
Query: 99 LFKGHPELIVGFNTFLPPGYKIEVQSNG 126
LF+G +L+ F FLP + NG
Sbjct: 220 LFRGQEDLLSEFGQFLPEAKRSLFTGNG 247
Score = 37.5 bits (83), Expect = 0.25
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 210 AIEYVNKIKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQTEQEVYSQVAKLFEHQ 269
A+ Y++++K RF P Y FLEI +KE +++ V +V++LF
Sbjct: 44 ALTYLDQVKIRFGSDPATYNGFLEI----------MKEFKSQSIDTPGVIRRVSQLFHEH 93
Query: 270 EDLLAEFGQFLP 281
DL+ F FLP
Sbjct: 94 PDLIVGFNAFLP 105
>BC063531-1|AAH63531.1| 353|Homo sapiens SIN3B protein protein.
Length = 353
Score = 146 bits (353), Expect = 5e-34
Identities = 81/194 (41%), Positives = 113/194 (58%), Gaps = 17/194 (8%)
Query: 206 EFNHAIEYVNKIKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQTEQEVYSQVAKL 265
EFN+AI YVNKIK+RF P+ Y+ FLEILH YQ+ + + + +E+EV+++VA L
Sbjct: 161 EFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVANL 220
Query: 266 FEHQEDLLAEFGQFLPDAK-------------AVTKPE--PAHEHHPMTFPTXXXXXXXX 310
F QEDLL+EFGQFLP+AK +V K E EH
Sbjct: 221 FRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTPEHSRKRSRPSLLRPVSA 280
Query: 311 XXXXXXCLSGATVRDVSYSEAAKLATIHDYSFFERARKALRSQQVYDNFLRCLLLFTNEI 370
L G +D+S + K T+ ++SFF++ R+ L+SQ+VY+NFLRC+ LF E+
Sbjct: 281 PAKKKMKLRG--TKDLSIAAVGKYGTLQEFSFFDKVRRVLKSQEVYENFLRCIALFNQEL 338
Query: 371 ISSSELLSVTSPFL 384
+S SELL + SPFL
Sbjct: 339 VSGSELLQLVSPFL 352
Score = 123 bits (296), Expect = 4e-27
Identities = 54/83 (65%), Positives = 67/83 (80%)
Query: 51 VEDALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGVITRVSNLFKGHPELIVGF 110
VEDAL+YLDQVK +F + P YN FL+IMKEFKSQ+IDTPGVI RVS LF HP+LIVGF
Sbjct: 41 VEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGF 100
Query: 111 NTFLPPGYKIEVQSNGQVSVSMP 133
N FLP GY+I++ NG++++ P
Sbjct: 101 NAFLPLGYRIDIPKNGKLNIQSP 123
Score = 53.2 bits (122), Expect = 5e-06
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 49 LKVEDALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPG----------VITRVSN 98
++ +A+SY++++K +F P++Y FL+I+ ++ + ++T G V T V+N
Sbjct: 160 VEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVAN 219
Query: 99 LFKGHPELIVGFNTFLPPGYKIEVQSNG 126
LF+G +L+ F FLP + NG
Sbjct: 220 LFRGQEDLLSEFGQFLPEAKRSLFTGNG 247
Score = 37.5 bits (83), Expect = 0.25
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 210 AIEYVNKIKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQTEQEVYSQVAKLFEHQ 269
A+ Y++++K RF P Y FLEI +KE +++ V +V++LF
Sbjct: 44 ALTYLDQVKIRFGSDPATYNGFLEI----------MKEFKSQSIDTPGVIRRVSQLFHEH 93
Query: 270 EDLLAEFGQFLP 281
DL+ F FLP
Sbjct: 94 PDLIVGFNAFLP 105
>BC025026-1|AAH25026.1| 352|Homo sapiens SIN3B protein protein.
Length = 352
Score = 146 bits (353), Expect = 5e-34
Identities = 81/194 (41%), Positives = 113/194 (58%), Gaps = 17/194 (8%)
Query: 206 EFNHAIEYVNKIKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQTEQEVYSQVAKL 265
EFN+AI YVNKIK+RF P+ Y+ FLEILH YQ+ + + + +E+EV+++VA L
Sbjct: 160 EFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVANL 219
Query: 266 FEHQEDLLAEFGQFLPDAK-------------AVTKPE--PAHEHHPMTFPTXXXXXXXX 310
F QEDLL+EFGQFLP+AK +V K E EH
Sbjct: 220 FRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTPEHSRKRSRPSLLRPVSA 279
Query: 311 XXXXXXCLSGATVRDVSYSEAAKLATIHDYSFFERARKALRSQQVYDNFLRCLLLFTNEI 370
L G +D+S + K T+ ++SFF++ R+ L+SQ+VY+NFLRC+ LF E+
Sbjct: 280 PAKKKMKLRG--TKDLSIAAVGKYGTLQEFSFFDKVRRVLKSQEVYENFLRCIALFNQEL 337
Query: 371 ISSSELLSVTSPFL 384
+S SELL + SPFL
Sbjct: 338 VSGSELLQLVSPFL 351
Score = 123 bits (296), Expect = 4e-27
Identities = 54/83 (65%), Positives = 67/83 (80%)
Query: 51 VEDALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGVITRVSNLFKGHPELIVGF 110
VEDAL+YLDQVK +F + P YN FL+IMKEFKSQ+IDTPGVI RVS LF HP+LIVGF
Sbjct: 40 VEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGF 99
Query: 111 NTFLPPGYKIEVQSNGQVSVSMP 133
N FLP GY+I++ NG++++ P
Sbjct: 100 NAFLPLGYRIDIPKNGKLNIQSP 122
Score = 53.2 bits (122), Expect = 5e-06
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 49 LKVEDALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPG----------VITRVSN 98
++ +A+SY++++K +F P++Y FL+I+ ++ + ++T G V T V+N
Sbjct: 159 VEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVAN 218
Query: 99 LFKGHPELIVGFNTFLPPGYKIEVQSNG 126
LF+G +L+ F FLP + NG
Sbjct: 219 LFRGQEDLLSEFGQFLPEAKRSLFTGNG 246
Score = 37.5 bits (83), Expect = 0.25
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 210 AIEYVNKIKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQTEQEVYSQVAKLFEHQ 269
A+ Y++++K RF P Y FLEI +KE +++ V +V++LF
Sbjct: 43 ALTYLDQVKIRFGSDPATYNGFLEI----------MKEFKSQSIDTPGVIRRVSQLFHEH 92
Query: 270 EDLLAEFGQFLP 281
DL+ F FLP
Sbjct: 93 PDLIVGFNAFLP 104
>BC018973-1|AAH18973.1| 417|Homo sapiens SIN3A protein protein.
Length = 417
Score = 37.9 bits (84), Expect = 0.19
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 912 EYYXXXXXXXXXXXXXXMESSAFEDAAREMLGIKAYPAYTLDKLVSIAV 960
+YY ++SS +ED+ REM I AY A+T+DKL+ V
Sbjct: 101 DYYPAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIV 149
>AL117513-1|CAB55972.1| 361|Homo sapiens hypothetical protein
protein.
Length = 361
Score = 37.9 bits (84), Expect = 0.19
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 912 EYYXXXXXXXXXXXXXXMESSAFEDAAREMLGIKAYPAYTLDKLVSIAV 960
+YY ++SS +ED+ REM I AY A+T+DKL+ V
Sbjct: 45 DYYPAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIV 93
>BC005113-1|AAH05113.1| 420|Homo sapiens SIN3B protein protein.
Length = 420
Score = 34.7 bits (76), Expect = 1.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 912 EYYXXXXXXXXXXXXXXMESSAFEDAAREMLGIKAYPAYTLDKLV 956
EYY ++ + +ED REM I AY +T+DKLV
Sbjct: 104 EYYPAFLDMVRSLLEGSIDPTQYEDTLREMFTIHAYVGFTMDKLV 148
>AF086762-1|AAF28400.1| 1111|Homo sapiens C11orf9 protein.
Length = 1111
Score = 34.7 bits (76), Expect = 1.7
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 115 PPGYKIEVQSNGQVSVSMPSP--TAIGSGVL-LGVHHTQQPQLVHLLPVPHAEECRPVGP 171
PP Y + +Q + + P P A+G G++ +HHTQQ Q++H L H E P P
Sbjct: 186 PPHYPV-LQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAEL-PTHP 243
Query: 172 ALQHLSHAAPDPALH 186
+ + +P L+
Sbjct: 244 SKKRKHSESPPSTLN 258
>AB023171-1|BAA76798.2| 1183|Homo sapiens KIAA0954 protein protein.
Length = 1183
Score = 34.7 bits (76), Expect = 1.7
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 115 PPGYKIEVQSNGQVSVSMPSP--TAIGSGVL-LGVHHTQQPQLVHLLPVPHAEECRPVGP 171
PP Y + +Q + + P P A+G G++ +HHTQQ Q++H L H E P P
Sbjct: 227 PPHYPV-LQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAEL-PTHP 284
Query: 172 ALQHLSHAAPDPALH 186
+ + +P L+
Sbjct: 285 SKKRKHSESPPSTLN 299
>BC117557-1|AAI17558.1| 1098|Homo sapiens GON4L protein protein.
Length = 1098
Score = 33.1 bits (72), Expect = 5.3
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 54 ALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGV--ITRVSNLFKGHPELIVGFN 111
A +YL +V+ P Y DFL ++ EF+S T V + L + P+L+ F
Sbjct: 827 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRRTAVDLYKSLQILLQDWPQLLKDFA 886
Query: 112 TFLPP 116
FL P
Sbjct: 887 AFLLP 891
>BC064933-1|AAH64933.1| 719|Homo sapiens GON4L protein protein.
Length = 719
Score = 33.1 bits (72), Expect = 5.3
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 54 ALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGV--ITRVSNLFKGHPELIVGFN 111
A +YL +V+ P Y DFL ++ EF+S T V + L + P+L+ F
Sbjct: 110 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRRTAVDLYKSLQILLQDWPQLLKDFA 169
Query: 112 TFLPP 116
FL P
Sbjct: 170 AFLLP 174
>AY335491-1|AAR01261.1| 2241|Homo sapiens GON4L isoform C protein.
Length = 2241
Score = 33.1 bits (72), Expect = 5.3
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 54 ALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGV--ITRVSNLFKGHPELIVGFN 111
A +YL +V+ P Y DFL ++ EF+S T V + L + P+L+ F
Sbjct: 1631 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRRTAVDLYKSLQILLQDWPQLLKDFA 1690
Query: 112 TFLPP 116
FL P
Sbjct: 1691 AFLLP 1695
>AY335490-1|AAR01260.1| 2241|Homo sapiens GON4L isoform A protein.
Length = 2241
Score = 33.1 bits (72), Expect = 5.3
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 54 ALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGV--ITRVSNLFKGHPELIVGFN 111
A +YL +V+ P Y DFL ++ EF+S T V + L + P+L+ F
Sbjct: 1631 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRRTAVDLYKSLQILLQDWPQLLKDFA 1690
Query: 112 TFLPP 116
FL P
Sbjct: 1691 AFLLP 1695
>AL162734-1|CAH71640.1| 1078|Homo sapiens novel protein protein.
Length = 1078
Score = 33.1 bits (72), Expect = 5.3
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 54 ALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGV--ITRVSNLFKGHPELIVGFN 111
A +YL +V+ P Y DFL ++ EF+S T V + L + P+L+ F
Sbjct: 469 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRRTAVDLYKSLQILLQDWPQLLKDFA 528
Query: 112 TFLPP 116
FL P
Sbjct: 529 AFLLP 533
>AL139128-1|CAH69942.1| 1078|Homo sapiens novel protein protein.
Length = 1078
Score = 33.1 bits (72), Expect = 5.3
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 54 ALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGV--ITRVSNLFKGHPELIVGFN 111
A +YL +V+ P Y DFL ++ EF+S T V + L + P+L+ F
Sbjct: 469 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRRTAVDLYKSLQILLQDWPQLLKDFA 528
Query: 112 TFLPP 116
FL P
Sbjct: 529 AFLLP 533
>AK000210-1|BAA91011.1| 697|Homo sapiens protein ( Homo sapiens
cDNA FLJ20203 fis, clone COLF1334. ).
Length = 697
Score = 33.1 bits (72), Expect = 5.3
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 54 ALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGV--ITRVSNLFKGHPELIVGFN 111
A +YL +V+ P Y DFL ++ EF+S T V + L + P+L+ F
Sbjct: 88 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRRTAVDLYKSLQILLQDWPQLLKDFA 147
Query: 112 TFLPP 116
FL P
Sbjct: 148 AFLLP 152
>AB195687-1|BAF51556.1| 2240|Homo sapiens YY1AP-related protein1
protein.
Length = 2240
Score = 33.1 bits (72), Expect = 5.3
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 54 ALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGV--ITRVSNLFKGHPELIVGFN 111
A +YL +V+ P Y DFL ++ EF+S T V + L + P+L+ F
Sbjct: 1631 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRRTAVDLYKSLQILLQDWPQLLKDFA 1690
Query: 112 TFLPP 116
FL P
Sbjct: 1691 AFLLP 1695
>AB046826-1|BAB13432.1| 1095|Homo sapiens KIAA1606 protein protein.
Length = 1095
Score = 33.1 bits (72), Expect = 5.3
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 54 ALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGV--ITRVSNLFKGHPELIVGFN 111
A +YL +V+ P Y DFL ++ EF+S T V + L + P+L+ F
Sbjct: 486 AQAYLTRVREALQHIPGKYEDFLQVIYEFESSTQRRTAVDLYKSLQILLQDWPQLLKDFA 545
Query: 112 TFLPP 116
FL P
Sbjct: 546 AFLLP 550
>L06845-1|AAA73901.1| 595|Homo sapiens cysteinyl-tRNA synthetase
protein.
Length = 595
Score = 32.7 bits (71), Expect = 7.0
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 217 IKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQTEQEVYSQVAKLFEHQEDLLAEF 276
+K + PDK + I HA Q L++ + T +EV S V L E +DLL+++
Sbjct: 95 VKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVNSCVEVLLEEAKDLLSDW 154
>BT009913-1|AAP88915.1| 748|Homo sapiens cysteinyl-tRNA synthetase
protein.
Length = 748
Score = 32.7 bits (71), Expect = 7.0
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 217 IKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQTEQEVYSQVAKLFEHQEDLLAEF 276
+K + PDK + I HA Q L++ + T +EV S V L E +DLL+++
Sbjct: 138 VKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVNSCVEVLLEEAKDLLSDW 197
>BC002880-1|AAH02880.1| 748|Homo sapiens cysteinyl-tRNA synthetase
protein.
Length = 748
Score = 32.7 bits (71), Expect = 7.0
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 217 IKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQTEQEVYSQVAKLFEHQEDLLAEF 276
+K + PDK + I HA Q L++ + T +EV S V L E +DLL+++
Sbjct: 138 VKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVNSCVEVLLEEAKDLLSDW 197
>AK222614-1|BAD96334.1| 726|Homo sapiens cysteine-tRNA ligase
isoform a variant protein.
Length = 726
Score = 32.7 bits (71), Expect = 7.0
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 217 IKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQTEQEVYSQVAKLFEHQEDLLAEF 276
+K + PDK + I HA Q L++ + T +EV S V L E +DLL+++
Sbjct: 138 VKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVNSCVEVLLEEAKDLLSDW 197
>AF288207-1|AAG00579.1| 726|Homo sapiens cysteinyl-tRNA synthetase
protein.
Length = 726
Score = 32.7 bits (71), Expect = 7.0
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 217 IKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQTEQEVYSQVAKLFEHQEDLLAEF 276
+K + PDK + I HA Q L++ + T +EV S V L E +DLL+++
Sbjct: 138 VKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVNSCVEVLLEEAKDLLSDW 197
>AF288206-1|AAG00578.1| 748|Homo sapiens cytoplasmic cysteinyl-tRNA
synthetase protein.
Length = 748
Score = 32.7 bits (71), Expect = 7.0
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 217 IKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQTEQEVYSQVAKLFEHQEDLLAEF 276
+K + PDK + I HA Q L++ + T +EV S V L E +DLL+++
Sbjct: 138 VKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVNSCVEVLLEEAKDLLSDW 197
>AB208814-1|BAD92051.1| 281|Homo sapiens cysteine-tRNA ligase
isoform b variant protein.
Length = 281
Score = 32.7 bits (71), Expect = 7.0
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 217 IKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQTEQEVYSQVAKLFEHQEDLLAEF 276
+K + PDK + I HA Q L++ + T +EV S V L E +DLL+++
Sbjct: 158 VKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVNSCVEVLLEEAKDLLSDW 217
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.318 0.134 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,623,352
Number of Sequences: 224733
Number of extensions: 4602218
Number of successful extensions: 13873
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 13737
Number of HSP's gapped (non-prelim): 114
length of query: 1039
length of database: 73,234,838
effective HSP length: 97
effective length of query: 942
effective length of database: 51,435,737
effective search space: 48452464254
effective search space used: 48452464254
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 70 (32.3 bits)
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