GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000202-TA|BGIBMGA000202-PA|undefined
         (136 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.2  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   5.2  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          20   9.1  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           20   9.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 49   PDEDKEFYSALPGQLS 64
            PD DKE ++A   +LS
Sbjct: 2456 PDSDKEAFAAFVRELS 2471


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 8/26 (30%), Positives = 12/26 (46%)

Query: 110 NHGVGSCPENTVAIHGLCVERIEELD 135
           N     C  N    +G CV+RI + +
Sbjct: 104 NINTDDCSPNPCRNNGSCVDRIADFE 129


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)

Query: 58 ALPGQLSPTLDCDCEEYN 75
          ALP    P  D +C +YN
Sbjct: 41 ALPPITYPPSDWNCPQYN 58


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)

Query: 58 ALPGQLSPTLDCDCEEYN 75
          ALP    P  D +C +YN
Sbjct: 32 ALPPITYPPSDWNCPQYN 49


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.140    0.438 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,789
Number of Sequences: 317
Number of extensions: 832
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 136
length of database: 114,650
effective HSP length: 51
effective length of query: 85
effective length of database: 98,483
effective search space:  8371055
effective search space used:  8371055
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
S2: 39 (19.8 bits)