GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000202-TA|BGIBMGA000202-PA|undefined
         (136 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X86685-1|CAA60383.1| 1283|Drosophila melanogaster neurexin IV pr...    28   4.9  
BT011472-1|AAR99130.1| 1284|Drosophila melanogaster RE18634p pro...    28   4.9  
AE014296-2104|AAF49951.1| 1284|Drosophila melanogaster CG6827-PA...    28   4.9  
AE014296-2103|AAN12252.1| 1366|Drosophila melanogaster CG6827-PB...    28   4.9  

>X86685-1|CAA60383.1| 1283|Drosophila melanogaster neurexin IV
           protein.
          Length = 1283

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 103 KKSLYFINHG-VGSCPENTVAIHGLCVERIE 132
           K+ LY I+ G VG C  N    +G C+ER +
Sbjct: 951 KRGLYGISTGCVGRCESNPCLNNGTCIERYD 981


>BT011472-1|AAR99130.1| 1284|Drosophila melanogaster RE18634p
           protein.
          Length = 1284

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 103 KKSLYFINHG-VGSCPENTVAIHGLCVERIE 132
           K+ LY I+ G VG C  N    +G C+ER +
Sbjct: 952 KRGLYGISTGCVGRCESNPCLNNGTCIERYD 982


>AE014296-2104|AAF49951.1| 1284|Drosophila melanogaster CG6827-PA,
           isoform A protein.
          Length = 1284

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 103 KKSLYFINHG-VGSCPENTVAIHGLCVERIE 132
           K+ LY I+ G VG C  N    +G C+ER +
Sbjct: 952 KRGLYGISTGCVGRCESNPCLNNGTCIERYD 982


>AE014296-2103|AAN12252.1| 1366|Drosophila melanogaster CG6827-PB,
            isoform B protein.
          Length = 1366

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 103  KKSLYFINHG-VGSCPENTVAIHGLCVERIE 132
            K+ LY I+ G VG C  N    +G C+ER +
Sbjct: 1034 KRGLYGISTGCVGRCESNPCLNNGTCIERYD 1064


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.320    0.140    0.438 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,524,863
Number of Sequences: 52641
Number of extensions: 169648
Number of successful extensions: 676
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 676
Number of HSP's gapped (non-prelim): 4
length of query: 136
length of database: 24,830,863
effective HSP length: 78
effective length of query: 58
effective length of database: 20,724,865
effective search space: 1202042170
effective search space used: 1202042170
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)