Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000200-TA|BGIBMGA000200-PA|IPR001841|Zinc finger,
RING-type, IPR003892|Ubiquitin system component Cue
(622 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16806| Best HMM Match : CUE (HMM E-Value=1e-07) 60 7e-09
SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 2e-06
SB_39497| Best HMM Match : zf-C3HC4 (HMM E-Value=5.1e-12) 46 7e-05
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 46 1e-04
SB_24514| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-04
SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21) 43 8e-04
SB_23054| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0) 42 0.001
SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18) 42 0.002
SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.003
SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.005
SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 40 0.005
SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 40 0.005
SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 39 0.010
SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 39 0.014
SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23) 38 0.018
SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09) 38 0.024
SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23) 38 0.032
SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10) 38 0.032
SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.032
SB_39560| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00055) 37 0.042
SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.056
SB_698| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00037) 36 0.074
SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27) 36 0.074
SB_23934| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 36 0.074
SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08) 36 0.13
SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021) 35 0.17
SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14) 35 0.17
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) 35 0.17
SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19) 35 0.17
SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 35 0.22
SB_13966| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.22
SB_12329| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.22
SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20) 35 0.22
SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 34 0.30
SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08) 34 0.30
SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034) 34 0.30
SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 34 0.30
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.39
SB_31664| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.39
SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.39
SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.39
SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 33 0.52
SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21) 33 0.52
SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 33 0.52
SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08) 33 0.69
SB_31765| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.69
SB_13493| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00046) 33 0.69
SB_7109| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0029) 33 0.69
SB_33822| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0022) 33 0.69
SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12) 33 0.69
SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08) 33 0.69
SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11) 33 0.91
SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.91
SB_23995| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-05) 33 0.91
SB_15491| Best HMM Match : zf-C3HC4 (HMM E-Value=0.079) 33 0.91
SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09) 33 0.91
SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 32 1.2
SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 32 1.2
SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18) 32 1.2
SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 32 1.2
SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 32 1.2
SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 32 1.2
SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 32 1.2
SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 32 1.2
SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15) 32 1.2
SB_24433| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.2
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.2
SB_7967| Best HMM Match : zf-AD (HMM E-Value=3.4) 32 1.2
SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18) 32 1.2
SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.2
SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.6
SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.6
SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.6
SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 32 1.6
SB_42817| Best HMM Match : zf-C3HC4 (HMM E-Value=0.12) 32 1.6
SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.6
SB_52986| Best HMM Match : zf-C2H2 (HMM E-Value=0.0042) 31 2.1
SB_49426| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.1
SB_40091| Best HMM Match : CNH (HMM E-Value=8.5e-07) 31 2.1
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.1
SB_48401| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.1
SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 31 2.1
SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018) 31 2.1
SB_4080| Best HMM Match : zf-C3HC4 (HMM E-Value=0.23) 31 2.1
SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17) 31 2.8
SB_35671| Best HMM Match : zf-C3HC4 (HMM E-Value=0.01) 31 2.8
SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.8
SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.8
SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.8
SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15) 31 2.8
SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06) 31 2.8
SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.8
SB_11042| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00013) 31 2.8
SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.7
SB_57032| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.7
SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.7
SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.7
SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15) 31 3.7
SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.7
SB_23154| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.4
SB_20928| Best HMM Match : NHL (HMM E-Value=0) 29 8.4
SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.4
>SB_16806| Best HMM Match : CUE (HMM E-Value=1e-07)
Length = 322
Score = 59.7 bits (138), Expect = 7e-09
Identities = 24/34 (70%), Positives = 28/34 (82%)
Query: 57 MDEVMLWCSWFTLVGFLHLMGQLCKDRFEYLASS 90
M+EVM W +WFTL+GF HL QLCKDRFEYL S+
Sbjct: 1 MNEVMWWTAWFTLLGFFHLFAQLCKDRFEYLWSN 34
Score = 58.8 bits (136), Expect = 1e-08
Identities = 22/36 (61%), Positives = 30/36 (83%)
Query: 272 YPMASKEEVEKNQDNCAICWEPMKEARKLPCSHLFH 307
+P A+ EE+ +N D+CAICW+ M +ARKLPC+HLFH
Sbjct: 76 FPEATTEELLQNNDDCAICWDNMGKARKLPCNHLFH 111
Score = 31.9 bits (69), Expect = 1.6
Identities = 17/40 (42%), Positives = 18/40 (45%)
Query: 436 QVLGMFPQXXXXXXXXXXXXTRSAHLTLDNILEGRLQPPA 475
QV MFP T S LT DN LEGRL P+
Sbjct: 140 QVHAMFPHVPINIITEDLRQTHSIELTTDNFLEGRLAVPS 179
>SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 51.2 bits (117), Expect = 2e-06
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 274 MASKEEVEKNQDNCAIC---WEPMKEARKLPCSHLFHNSCVRQWVQQDASCPTCRRGL 328
+ K E + +C IC +E + +++PC HLFH C+ W+++ SCP CR L
Sbjct: 49 VTDKHLKELSTSSCPICLGDYEKGESTKQMPCDHLFHPGCILPWLEKTNSCPVCRHEL 106
>SB_39497| Best HMM Match : zf-C3HC4 (HMM E-Value=5.1e-12)
Length = 558
Score = 46.4 bits (105), Expect = 7e-05
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 261 RHRHLSTSPLHYPMASKEEVEKNQDNCAICWEPMKEARKL---PCSHLFHNSCVRQWVQQ 317
R H+ L + V + C IC E K + L PC H FH CV W+
Sbjct: 188 RSSHIEEDGLSETASLASHVTEKNPKCVICLEGFKNGQDLRIVPCRHEFHKECVDPWLLS 247
Query: 318 DASCPTC 324
+ +CP C
Sbjct: 248 NFTCPLC 254
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 45.6 bits (103), Expect = 1e-04
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 275 ASKEEVEKNQD--NCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDASCPTCR 325
A K VE+ +D +C +C E A L CSH F C++ W+++ +CP CR
Sbjct: 357 ARKSVVEEMEDEFSCIVCQELFIRATTLTCSHSFCEYCLQSWLRKRNTCPICR 409
>SB_24514| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 45.6 bits (103), Expect = 1e-04
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 285 DNCAICWEPMKEARKL---PCSHLFHNSCVRQWVQQ-DASCPTCRR 326
D CAIC + KE KL PC H +H CV W+ + +CP C+R
Sbjct: 299 DVCAICLDEYKEGDKLRILPCDHAYHCKCVDPWLTEGKRTCPVCKR 344
>SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21)
Length = 645
Score = 42.7 bits (96), Expect = 8e-04
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 274 MASKEEVEKNQDN--CAICWEPMKEARKLPCSHLFHNSCV---RQWVQQDASCPTCR 325
++S+ +EK ++ C++C E +E + LPC H F C+ +Q + + CPTCR
Sbjct: 7 ISSQSSIEKVREELTCSVCLEQFREPKMLPCFHTFCKECLEKTKQSFRGNLLCPTCR 63
>SB_23054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 42.3 bits (95), Expect = 0.001
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 287 CAICWEPMKEARKLPCSHLFHNSCVRQWVQQDASCP 322
C + P++ RKL C H+FH C+ W+ + CP
Sbjct: 215 CLSAYHPLQYVRKLQCRHVFHRDCIDSWLATQSICP 250
>SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)
Length = 695
Score = 42.3 bits (95), Expect = 0.001
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 263 RHLSTSPLHYPMASKEEVE------KNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQ 316
+HL T P + ++E+ E C IC E K+ R PC HL + C+ QW +
Sbjct: 155 QHLITPPDEHVKVTEEQYELYCEMGSTFQLCKICAENNKDVRIEPCGHLMCHLCLEQWQE 214
Query: 317 QDA-SCPTCR 325
+ CP CR
Sbjct: 215 KGGDGCPFCR 224
>SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18)
Length = 398
Score = 41.5 bits (93), Expect = 0.002
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 275 ASKEEVEKNQDNCAICWE---PMKEARKLPCSHLFHNSCVRQWVQQDASCPTCRR 326
A+K + +C IC E P R L C H + C+ +W++ + +CP CR+
Sbjct: 250 AAKGKKRYESKSCPICLEEFTPETPTRLLVCGHKYCEPCLSRWLENNTTCPICRK 304
>SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 41.1 bits (92), Expect = 0.003
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 287 CAICWEPMKEARKLPCSHLFHNSCVRQWVQQDA-SCPTCR 325
C IC E K+ R PC HL + C+ QW ++ CP CR
Sbjct: 381 CKICAENNKDVRIEPCGHLMCHLCLEQWQEKGGDGCPFCR 420
>SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 40.3 bits (90), Expect = 0.005
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 287 CAICWEPMKEARKLPCSHLFHNSCVRQWVQQ---DASCPTCRRGLAHG 331
CAIC E + + PC H F C+ +W+ Q + CP C+ ++ G
Sbjct: 160 CAICKEVLTQPIATPCDHYFCVLCICEWLDQTYNKSGCPVCKASISPG 207
>SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 262
Score = 40.3 bits (90), Expect = 0.005
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 287 CAICWEPMKEARKLPCSHLFHNSCVRQWVQQ---DASCPTCRRGLAHG 331
CAIC E + + PC H F C+ +W+ Q + CP C+ ++ G
Sbjct: 34 CAICKEVLTQPIATPCDHYFCVLCICEWLDQTYNKSGCPVCKASISPG 81
>SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 40.3 bits (90), Expect = 0.005
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 287 CAICWEPMKEARKLPCSHLFHNSCVRQWVQQ---DASCPTCRRGLAHG 331
CAIC E + + PC H F C+ +W+ Q + CP C+ ++ G
Sbjct: 160 CAICKEVLTQPIATPCDHYFCVLCICEWLDQTYNKSGCPVCKASISPG 207
>SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
Length = 306
Score = 39.1 bits (87), Expect = 0.010
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 10/62 (16%)
Query: 280 VEKNQDN--CAICWEPMKEARKLPCSHLFHNSCVRQWVQQ--------DASCPTCRRGLA 329
+EK N C IC E ++ A PC H F C+ W+ ASCP+CR L
Sbjct: 9 IEKVDPNLLCGICAEVLERAVLTPCGHSFCGVCLETWMNAKLEENEKCPASCPSCRADLY 68
Query: 330 HG 331
G
Sbjct: 69 QG 70
>SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 38.7 bits (86), Expect = 0.014
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 287 CAICWEPMKEARKLPCSHLFHNSCVRQWVQQ---DASCPTCRRGLA 329
CAIC E + + PC H F C+ +W+ Q + CP C+ ++
Sbjct: 160 CAICKEVLTQPIATPCDHYFCVLCICEWLDQTYNKSGCPVCKASIS 205
>SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23)
Length = 877
Score = 38.3 bits (85), Expect = 0.018
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 271 HYPMASKEEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWV--QQD--ASCPTCRR 326
H S++++ + Q C IC +++AR LPC H + C+ + +Q A CP+C R
Sbjct: 130 HRETGSQDDI-RQQLACGICHALLRDARVLPCLHTYCRRCIEDIILHRQSVRAHCPSCNR 188
>SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09)
Length = 310
Score = 37.9 bits (84), Expect = 0.024
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 287 CAICWEPMKEARKLPCSHLFHNSCVRQWVQQDASCPTCRRGL 328
C IC + ++E PC H + ++CV W+ +CP R+ L
Sbjct: 18 CCICRDVLEEPLMAPCEHSYCSACVLGWLTHYNTCPEDRQSL 59
>SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23)
Length = 581
Score = 37.5 bits (83), Expect = 0.032
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 287 CAICWEPMKEARKLPCSHLFHNSCVRQWV---QQDASCPTCRRGLAHG 331
C +C E R LPC H F C+ V SCP+CR +A G
Sbjct: 145 CPLCHEMFANPRLLPCLHTFCKRCLENLVPPRSHTLSCPSCRLDVALG 192
>SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10)
Length = 337
Score = 37.5 bits (83), Expect = 0.032
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 277 KEEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQ-DASCPTCR 325
++E + C IC + + E LPC H F C Q VQ+ + CP CR
Sbjct: 27 QDEKDIEDFTCPICLQLLVEPVVLPCEHEFCKMCFTQNVQEANLQCPMCR 76
>SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 37.5 bits (83), Expect = 0.032
Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 287 CAICWEPMKEARKLPCSHLFHNSCVRQWVQQDASCP-TCRR 326
C IC+ +++ C H+F + C+ W+ ++ +CP TC +
Sbjct: 57 CGICFGVLEDPLVTTCGHVFCSQCLVHWIAENGTCPLTCEQ 97
>SB_39560| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00055)
Length = 545
Score = 37.1 bits (82), Expect = 0.042
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 276 SKEEVEKNQDNCAIC---WEPMKEARKLPCSHLFHNSCVRQWVQ 316
S + + +C +C + ++ RKLPC+H FH+ C+ +W++
Sbjct: 350 SASNKDMSNGSCVVCMMDYTNREKLRKLPCNHDFHSKCIDRWLK 393
>SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 36.7 bits (81), Expect = 0.056
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 271 HYPMASKEEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQ---QDASCPTCRRG 327
H P N + C IC + ++A C HLF C+ +W++ + CP C+ G
Sbjct: 48 HNPSEDPNSANANFE-CNICLDTARDAVISMCGHLFCWPCLHRWLETRPNRSMCPVCKAG 106
Query: 328 LA 329
++
Sbjct: 107 IS 108
>SB_698| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00037)
Length = 303
Score = 36.3 bits (80), Expect = 0.074
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 285 DNCAICWEPMK---EARKLPCSHLFHNSCVRQWV-QQDASCP 322
D C IC E + LPC H FH++C+R W+ CP
Sbjct: 255 DVCLICMEEYAVGDSMKYLPCRHNFHSACIRTWLTYTSCKCP 296
>SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27)
Length = 1387
Score = 36.3 bits (80), Expect = 0.074
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 287 CAICWEPMKEARKLPCSHLFHNSCVRQWVQQ-----DASCPTCRRGL 328
C IC P K + LPC H + + CV++ V+ CP C R +
Sbjct: 659 CPICSRPFKSPKILPCLHTYCSDCVKEIVRSRLGKLTLQCPKCPRSV 705
>SB_23934| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
Length = 617
Score = 36.3 bits (80), Expect = 0.074
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 8/47 (17%)
Query: 287 CAICWEPMKEARKL---PCSHLFHNSCVRQWVQQDAS-----CPTCR 325
C IC + K L PC H FH C+ W+ D + CP CR
Sbjct: 560 CVICLDEFKPGCTLLGLPCGHSFHQHCIEVWLAGDNTAPHHCCPNCR 606
>SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08)
Length = 599
Score = 35.5 bits (78), Expect = 0.13
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 272 YPMASKEEVEKNQDN--CAICWEPMKEARKLPCSHLFHNSCVRQWVQQD----ASCPTCR 325
+ MA E N + C++C E ++ R L C H + C+ V+ SCP CR
Sbjct: 9 HSMADSETTPNNVSDVTCSLCLEQYQDPRVLACLHTYCRHCLESLVEHSKECTVSCPQCR 68
>SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021)
Length = 358
Score = 35.1 bits (77), Expect = 0.17
Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 272 YPMASKEEVEKNQDNCAIC---WEPMKEARKLPCSHLFHNSCVRQWVQ 316
Y + ++ + + + C +C +E + R LPC H +H C+ +W++
Sbjct: 278 YRVTAESKKQNDDARCVVCLVDFEEKQLVRTLPCLHEYHTRCIDKWLK 325
>SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14)
Length = 594
Score = 35.1 bits (77), Expect = 0.17
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 276 SKEEVEKNQD-NCAICWEPMKEARKLPCSHLFHNSCVRQWVQQD----ASCPTCR 325
S+E+V +D C +C E ++ R L C H + C+ V+ SCP CR
Sbjct: 4 SEEKVGDVKDVTCCLCLEQYQDPRVLACLHTYCRHCLESLVEHSKECTVSCPQCR 58
>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
Length = 654
Score = 35.1 bits (77), Expect = 0.17
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 276 SKEEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDASCPTCRRGL 328
S E+ + C +C PC H+F +C+ + + CP CR L
Sbjct: 368 SAMEMTVEEFECTLCCRLFYNPVTTPCGHVFCRACLNRSLDHRPGCPICRSSL 420
>SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19)
Length = 320
Score = 35.1 bits (77), Expect = 0.17
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 284 QDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDASCPTCRRGLA 329
Q +C +C + +LPC H+F C++ + C CR+ ++
Sbjct: 68 QPDCPVCLQQASYPVRLPCGHMFCFLCIKGVALRSRKCAICRQPIS 113
>SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 346
Score = 34.7 bits (76), Expect = 0.22
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 287 CAICWEPMKEARKLPCSHLFHNSCVRQWVQQD--ASCPTCR 325
C IC ++ A C H F SC+ W+ + SCP+CR
Sbjct: 18 CNICVGVLENAITTICGHSFCESCLETWLSRPEVQSCPSCR 58
>SB_13966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 34.7 bits (76), Expect = 0.22
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 283 NQDNCAICWEPMK-EARKLPCSHLFHNSCVRQWVQQDASCPTC 324
N C +C P+ A C H FH C + + D CP C
Sbjct: 70 NGSKCNLCSRPLDLPAVHFLCLHSFHQPCFEGYAENDNECPIC 112
>SB_12329| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 34.7 bits (76), Expect = 0.22
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Query: 277 KEEVEKNQDN--CAICWEPMKEARKLPCSHLFHNSCVRQWVQQDASCPTCRRGLAH 330
+E++ K +D C +C + A +PC H+ C Q +CP CR + H
Sbjct: 134 QEKLSKLEDGLRCKVCMDEQINAVLIPCGHMV---CCEQCAMNLEACPVCRGAIDH 186
>SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)
Length = 470
Score = 34.7 bits (76), Expect = 0.22
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 282 KNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS----CPTCR 325
+++ CAIC E + R LPC H F C+ + CP C+
Sbjct: 10 EDEVTCAICIEHFTDPRLLPCLHTFCRHCLEDLAEHSGKGKLVCPLCK 57
>SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 604
Score = 34.3 bits (75), Expect = 0.30
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 274 MASKEEVEKNQDN--CAICWEPMKEARKLPCSHLFHNSCVRQWV----QQDASCPTCR 325
MA E K+ + C++C E ++ R L C H + C+ V ++ SCP CR
Sbjct: 2 MADSETKPKDVSDVTCSLCLEQYQDPRVLACLHTYCRHCLESLVEHSQERTVSCPQCR 59
>SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08)
Length = 688
Score = 34.3 bits (75), Expect = 0.30
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 302 CSHLFHNSCVRQWVQQDASCPTCRRGLA 329
C H+F C+ W ++ +CP CR +A
Sbjct: 499 CKHIFCEDCISLWFDREQTCPMCRARVA 526
>SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034)
Length = 671
Score = 34.3 bits (75), Expect = 0.30
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 292 EPMKEARKLPCSHLFHNSCVRQWVQQDASCPTCR 325
E +KE P H+F + C+ W++ + CPTCR
Sbjct: 108 EKVKEPVVCPNQHVFCSPCLDLWLRTNRYCPTCR 141
>SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 462
Score = 34.3 bits (75), Expect = 0.30
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 274 MASKEEVEKNQDN--CAICWEPMKEARKLPCSHLFHNSCVRQWV----QQDASCPTCR 325
MA E K+ + C++C E ++ R L C H + C+ V ++ SCP CR
Sbjct: 2 MADSETKPKDVSDVTCSLCLEQYQDPRVLACLHTYCRHCLESLVEHSQERTVSCPQCR 59
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 33.9 bits (74), Expect = 0.39
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 287 CAICWEPMKEARKL-PCSHLFHNSCVRQWVQQDASCPTC 324
C +C + +A + C H F SC+ W+Q CP C
Sbjct: 1366 CVLCGGYLVDATTIVECLHSFCRSCIVSWLQASYHCPVC 1404
>SB_31664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 223
Score = 33.9 bits (74), Expect = 0.39
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 287 CAICWEPMKE--ARKLPCSHLFHNSCVRQWVQQDASCPTCRRGL 328
C+IC E +++ + +L C H H CV + + A+CP CRR L
Sbjct: 27 CSICLEEVQKETSAELECGHGNHLKCVLRL--RSATCPVCRRPL 68
>SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 33.9 bits (74), Expect = 0.39
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 287 CAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS---CPTCR 325
C IC E + LPC H F +C+ + ++ CPTC+
Sbjct: 17 CGICQETYNNPKVLPCLHSFCQNCLDKSIRSQERVLVCPTCQ 58
>SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 33.9 bits (74), Expect = 0.39
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Query: 278 EEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCV-----RQWVQQDASCPTCR 325
EE + + C IC E K+ R LPC H F C+ R + CP C+
Sbjct: 7 EERLQKEVECPICLERFKDPRVLPCLHTFCYECLVGLASRYKTEGKWPCPQCK 59
>SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 858
Score = 33.5 bits (73), Expect = 0.52
Identities = 22/84 (26%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
Query: 287 CAICWEPMKEARKLP-CSHLFHNSCVRQWVQQDASCPTCRR--GLAHGAXXXXXXXXXHN 343
C IC E + L C H F C+ + + CPTCR G+ G +
Sbjct: 678 CPICLETITYPETLQGCGHTFCRPCITEASKSSKLCPTCRDPFGVQQGNMPWGTMNWKID 737
Query: 344 HLFHFDGTTVSGHFIPVKYYINST 367
H H G G + Y+ T
Sbjct: 738 HYKHLPGYERWGTIVIFYYFPGGT 761
>SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21)
Length = 380
Score = 33.5 bits (73), Expect = 0.52
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 285 DNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDASCPTC 324
+ C IC +P+ + C+H+F C+ ++ + P C
Sbjct: 63 EECPICLDPLDDPSITRCAHVFCTGCLTDVIENEGLAPRC 102
>SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 911
Score = 33.5 bits (73), Expect = 0.52
Identities = 22/84 (26%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
Query: 287 CAICWEPMKEARKLP-CSHLFHNSCVRQWVQQDASCPTCRR--GLAHGAXXXXXXXXXHN 343
C IC E + L C H F C+ + + CPTCR G+ G +
Sbjct: 753 CPICLETITYPETLQGCGHTFCRPCITEASKSSKLCPTCRDPFGVQQGNMPWGTMNWKID 812
Query: 344 HLFHFDGTTVSGHFIPVKYYINST 367
H H G G + Y+ T
Sbjct: 813 HYKHLPGYERWGTIVIFYYFPGGT 836
>SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08)
Length = 584
Score = 33.1 bits (72), Expect = 0.69
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 276 SKEEVEKNQD-NCAICWEPMKEARKLPCSHLFHNSCVRQWVQ----QDASCPTCR 325
S+E+V +D C +C E ++ R L C H + C+ + SCP CR
Sbjct: 4 SEEKVGDVKDVTCCLCLEQYQDPRVLACLHTYCRHCLESLAEHSQGDSISCPQCR 58
>SB_31765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 33.1 bits (72), Expect = 0.69
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 279 EVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDASCPTCRRGLAHG 331
EV K+ C IC E + + + +H +C+ Q + ++SCP C+ L+ G
Sbjct: 104 EVRKDDFYCPICSELLDKPVETIFTHNACGACLTQALAVNSSCPVCKTILSSG 156
>SB_13493| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00046)
Length = 488
Score = 33.1 bits (72), Expect = 0.69
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 287 CAICWEPMKEAR--KLPCSHLFHNSCVRQWVQQDASCPTCRRGL 328
C+IC E +++ +L C H H CV + + A+CP CRR L
Sbjct: 290 CSICLEEVQKETSVELECGHGNHLKCVLRL--RSATCPVCRRPL 331
>SB_7109| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0029)
Length = 232
Score = 33.1 bits (72), Expect = 0.69
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 279 EVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDASCPTCRRGLAHG 331
E+ K+ C IC E + + + +H +C+ Q + ++SCP C+ L+ G
Sbjct: 78 EIRKDDFYCPICCELLDKPVETIFTHNACGACLTQALAVNSSCPVCKTILSSG 130
>SB_33822| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0022)
Length = 229
Score = 33.1 bits (72), Expect = 0.69
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 279 EVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDASCPTCRRGLAHG 331
EV K+ C IC E + + + +H +C+ Q + ++SCP C+ L+ G
Sbjct: 125 EVRKDDFYCPICSELLDKPVETIFTHNACGACLTQALAVNSSCPVCKTILSSG 177
>SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12)
Length = 203
Score = 33.1 bits (72), Expect = 0.69
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 278 EEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCV-----RQWVQQDASCPTCR 325
E ++K + C IC E K+ R LPC H F C+ R + CP C+
Sbjct: 8 ERLQKEVE-CPICLERFKDPRVLPCLHTFCYECLVGLASRYKTEGKWPCPQCK 59
>SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08)
Length = 1631
Score = 33.1 bits (72), Expect = 0.69
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 265 LSTSPLHYPMASKEEVEKNQDNCAICWEPMKEARKLP-CSHLFHNSCVRQWVQQDAS--- 320
++ S + P + V++ + +C +C E +E LP C H C++ +++
Sbjct: 1 MAASSIESPDMRAKSVQREEISCPVCLEVFEEPLVLPSCGHSVCLQCLQNMTKRNPPSLL 60
Query: 321 CPTCR 325
CP CR
Sbjct: 61 CPVCR 65
>SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)
Length = 471
Score = 32.7 bits (71), Expect = 0.91
Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 264 HLSTSPLHYPMASKEEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDASCPT 323
+L + P ++ E+++ + C +C+ + E C H F C+ + + CP
Sbjct: 309 NLENGDIRSPASNTEQLDDFE--CKLCFNLLLEPVTSLCGHSFCRDCLYRSLDHRVECPC 366
Query: 324 CRRGL 328
CR L
Sbjct: 367 CRAPL 371
>SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 32.7 bits (71), Expect = 0.91
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 279 EVEKNQDNCAICWEPMKEARKLP-CSHLFHNSCVRQWV---QQDASCPTCRR 326
+V + C +C E +KE + L C+H C+ + +++ CPTCRR
Sbjct: 9 QVFSEELTCPVCLEELKEPKCLTSCAHNVCKPCLDRMTFNGEKEIRCPTCRR 60
>SB_23995| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-05)
Length = 96
Score = 32.7 bits (71), Expect = 0.91
Identities = 16/52 (30%), Positives = 22/52 (42%)
Query: 273 PMASKEEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDASCPTC 324
P S E N C IC E + ++LPC H C+ V ++A C
Sbjct: 8 PSKSDELSGSNSLVCPICEEEYDDPKRLPCMHTICLGCLESMVPKNALIMKC 59
>SB_15491| Best HMM Match : zf-C3HC4 (HMM E-Value=0.079)
Length = 689
Score = 32.7 bits (71), Expect = 0.91
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 287 CAICWEPMKEARKLP-CSHLFHNSCVRQWVQQD----ASCPTCRRG 327
C IC E E LP C H C+ +WV ++CP CR+G
Sbjct: 184 CIICCEGDDELELLPCCKQPCHYPCLWKWVHAHLTPRSTCPHCRKG 229
>SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09)
Length = 474
Score = 32.7 bits (71), Expect = 0.91
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 287 CAICWEPMKEARKLPCSHLFHNSCVRQWVQQDASCPTC 324
C C +K+ R LPC H +C+ + + CP C
Sbjct: 19 CPACSNVIKDPRILPCLHSICKTCLEKQLNGCLKCPVC 56
>SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 442
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 274 MASKEEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS-----CPTCR 325
M S +++ C+IC E + R LPC H F C+ + CP C+
Sbjct: 2 MTSASRRLEDEVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 119
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 274 MASKEEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS-----CPTCR 325
M S +++ C+IC E + R LPC H F C+ + CP C+
Sbjct: 2 MTSASRRLEDEVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18)
Length = 355
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 274 MASKEEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS-----CPTCR 325
M S +++ C+IC E + R LPC H F C+ + CP C+
Sbjct: 2 MTSASRRLEDEVRCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 291
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 274 MASKEEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS-----CPTCR 325
M S +++ C+IC E + R LPC H F C+ + CP C+
Sbjct: 2 MTSASRRLEDEVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 89
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 274 MASKEEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS-----CPTCR 325
M S +++ C+IC E + R LPC H F C+ + CP C+
Sbjct: 2 MTSASRRLEDEVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 274 MASKEEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS-----CPTCR 325
M S +++ C+IC E + R LPC H F C+ + CP C+
Sbjct: 2 MTSASRRLEDEVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 82
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 274 MASKEEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS-----CPTCR 325
M S +++ C+IC E + R LPC H F C+ + CP C+
Sbjct: 2 MTSASRRLQDEVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 745
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 274 MASKEEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS-----CPTCR 325
M S +++ C+IC E + R LPC H F C+ + CP C+
Sbjct: 2 MTSASRRLEDEVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15)
Length = 405
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 274 MASKEEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS-----CPTCR 325
M S +++ C+IC E + R LPC H F C+ + CP C+
Sbjct: 1 MTSASRRLEDEVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCK 57
>SB_24433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 32.3 bits (70), Expect = 1.2
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 274 MASKEEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDASCPTCR 325
+ K+E + C IC R LPC H+ SC+ + + + C C+
Sbjct: 417 LLQKQESVDVDELCPICCAMRISVRFLPCRHVSCRSCITRHLMNNKECFFCK 468
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 274 MASKEEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS-----CPTCR 325
M S +++ C+IC E + R LPC H F C+ + CP C+
Sbjct: 1 MTSASRRLEDEVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCK 57
>SB_7967| Best HMM Match : zf-AD (HMM E-Value=3.4)
Length = 837
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 254 GPHESQVRHRHLSTSPLHYPMASKEEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCV 311
G H V R L T P+H + S E++ K + + W + ++LP H F ++ V
Sbjct: 702 GSHLPDVTQRTLDTVPVHEFLPSVEDIPKLKKDLIPLWSRVM-VKQLPAFHFFRSAVV 758
>SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18)
Length = 316
Score = 32.3 bits (70), Expect = 1.2
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Query: 282 KNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS-----CPTCR 325
+++ C+IC E + + R LPC H F C+ + CP C+
Sbjct: 10 EDEVTCSICIEHLNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 32.3 bits (70), Expect = 1.2
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 287 CAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS----CPTCR 325
C IC + KE + L C H C+ +++S CP CR
Sbjct: 21 CPICLDEFKEPKTLSCMHDLCRKCLEDMAARESSRVIRCPLCR 63
>SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 585
Score = 31.9 bits (69), Expect = 1.6
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 279 EVEKNQDN-CAICWEPMKEARKLPCSHLFHNSCVRQWVQQDASCPTCR 325
++++NQ C IC E + L C H+ SC R QQ CP CR
Sbjct: 529 DMDENQGTQCVICLENQRNVVLLNCGHVC--SC-RTCAQQIHQCPVCR 573
>SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 31.9 bits (69), Expect = 1.6
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 268 SPLHYPMASKEEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQ------QDASC 321
SPL MAS + + + C++C + E + L C H F N C+ + + SC
Sbjct: 81 SPLQ--MASILDSLRQEAECSLCHKTPSEPKILKCFHTFCNECLTEKSAEFKGDGETFSC 138
Query: 322 PTCR 325
P+C+
Sbjct: 139 PSCK 142
>SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 31.9 bits (69), Expect = 1.6
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 286 NCAICWEPMKEARKLPCSHLFHNSCVRQWVQQD---ASCPTC 324
NC++C ++ + LPC H F +C+ V ++ +CP C
Sbjct: 19 NCSLCHRLIRGPKLLPCLHSFCLACLEDLVTENDVGFNCPQC 60
>SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 31.9 bits (69), Expect = 1.6
Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 5/57 (8%)
Query: 274 MASKEEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS-----CPTCR 325
M S + + C+IC E + R LPC H F C+ + CP C+
Sbjct: 2 MTSASRRLEGEVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_42817| Best HMM Match : zf-C3HC4 (HMM E-Value=0.12)
Length = 539
Score = 31.9 bits (69), Expect = 1.6
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Query: 287 CAICWEPMKEARKL-PC-SHLFHNSCVRQWVQQD----ASCPTCRRGL 328
C IC E E +L PC H+ C+ +WV ++CP CR+GL
Sbjct: 11 CIICCEGDDELMQLLPCCKQPCHHPCLWKWVHAHLTPRSTCPHCRKGL 58
>SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1022
Score = 31.9 bits (69), Expect = 1.6
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 287 CAICWEPMKEARKLPCSHLFHNSCVRQWV---QQDASCPTCR 325
C +C E + R PC H F CV + V Q CP C+
Sbjct: 405 CGVCRETYTDPRVAPCLHSFCKECVTKLVTERQGKFVCPDCQ 446
>SB_52986| Best HMM Match : zf-C2H2 (HMM E-Value=0.0042)
Length = 623
Score = 31.5 bits (68), Expect = 2.1
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 274 MASKEEVEKNQDNCAICWEPMKEARKLPCSH-LFHNSCVRQWV-QQDASCPTCRRGLA 329
M+SK ++ + C +C E ++ + C H + + CVR V +Q+ C CR L+
Sbjct: 1 MSSKRTRSESSNLCVVCCEEIEFSAVGKCDHPVCYKCCVRMRVLKQENYCTVCRSELS 58
>SB_49426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 31.5 bits (68), Expect = 2.1
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 268 SPLHYPMASKEEVEKNQ----DNCAICWEPMKEARKLP-CSHLFHNSCVRQWVQQDASCP 322
S L P ++K E+ + NC C ++ K+P CS H +C+R+ ++ S P
Sbjct: 267 SELRMPRSTKRTFERRRRLMATNCVCCTRTAEQTIKMPCCSKHLHATCLRRSIEAIPSMP 326
>SB_40091| Best HMM Match : CNH (HMM E-Value=8.5e-07)
Length = 653
Score = 31.5 bits (68), Expect = 2.1
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 99 VRLVGLLLGILAASTALLGVAVAWGLPAG 127
VR G+LLG++ A LLGV AWG+ G
Sbjct: 474 VRAWGVLLGVVRAWRVLLGVVRAWGVLLG 502
Score = 31.5 bits (68), Expect = 2.1
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 99 VRLVGLLLGILAASTALLGVAVAWGLPAG 127
VR G+LLG++ A LLGV AWG+ G
Sbjct: 504 VRAWGVLLGVVRAWRVLLGVVRAWGVLLG 532
Score = 31.5 bits (68), Expect = 2.1
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 99 VRLVGLLLGILAASTALLGVAVAWGLPAG 127
VR G+LLG++ A LLGV AWG+ G
Sbjct: 564 VRAWGVLLGVVRAWGVLLGVVQAWGVLIG 592
Score = 31.1 bits (67), Expect = 2.8
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 99 VRLVGLLLGILAASTALLGVAVAWGLPAG 127
VR G+LLG++ A LLGV AWG+ G
Sbjct: 454 VRAWGVLLGVVRAWGVLLGVVRAWGVLLG 482
Score = 31.1 bits (67), Expect = 2.8
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 99 VRLVGLLLGILAASTALLGVAVAWGLPAG 127
VR G+LLG++ A LLGV AWG+ G
Sbjct: 524 VRAWGVLLGVVRAWGVLLGVVRAWGVLLG 552
Score = 31.1 bits (67), Expect = 2.8
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 99 VRLVGLLLGILAASTALLGVAVAWGLPAG 127
VR G+LLG++ A LLGV AWG+ G
Sbjct: 534 VRAWGVLLGVVRAWGVLLGVVRAWGVLLG 562
Score = 31.1 bits (67), Expect = 2.8
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 99 VRLVGLLLGILAASTALLGVAVAWGLPAG 127
VR G+LLG++ A LLGV AWG+ G
Sbjct: 544 VRAWGVLLGVVRAWGVLLGVVRAWGVLLG 572
Score = 31.1 bits (67), Expect = 2.8
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 99 VRLVGLLLGILAASTALLGVAVAWGLPAG 127
VR G+LLG++ A LLGV AWG+ G
Sbjct: 554 VRAWGVLLGVVRAWGVLLGVVRAWGVLLG 582
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 31.5 bits (68), Expect = 2.1
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 274 MASKEEVEKNQDN--CAICWEPMKEARKLPCSHLFHNSCVRQWVQQD----ASCPTCR 325
MA E K+ + C++C ++ R L C H + C+ V+ SCP CR
Sbjct: 2 MADSETKPKDVSDVTCSLCLGQYQDPRVLACLHTYCRHCLESLVEHSKECTVSCPQCR 59
>SB_48401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 694
Score = 31.5 bits (68), Expect = 2.1
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 274 MASKEEVEKNQDNCAICWEPMKEARKLPCSH-LFHNSCVRQWV-QQDASCPTCRRGLA 329
M+SK ++ + C +C E ++ + C H + + CVR V +Q+ C CR L+
Sbjct: 1 MSSKRTRSESSNLCVVCCEEIEFSAVGKCDHPVCYKCCVRMRVLKQENYCTVCRSELS 58
>SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 463
Score = 31.5 bits (68), Expect = 2.1
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Query: 282 KNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS-----CPTCR 325
+++ C+IC E + R LPC H F C+ + CP C+
Sbjct: 10 EDEVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018)
Length = 843
Score = 31.5 bits (68), Expect = 2.1
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 9/55 (16%)
Query: 280 VEKNQDNCAICWE------PMKEARKLPCSHLFHNSCVR--QWVQQD-ASCPTCR 325
+EK C +C+ P + R L CSH F C+ + +Q D CPTC+
Sbjct: 323 IEKKDLTCPLCYTAYGTGYPQRIPRILDCSHTFCTECIMKIKELQGDVVECPTCK 377
>SB_4080| Best HMM Match : zf-C3HC4 (HMM E-Value=0.23)
Length = 203
Score = 31.5 bits (68), Expect = 2.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 301 PCSHLFHNSCVRQWVQQDASCPT 323
PC H F SC QW++ CP+
Sbjct: 80 PCMHSFCASCYSQWMEHSRDCPS 102
>SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17)
Length = 455
Score = 31.1 bits (67), Expect = 2.8
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 274 MASKEEVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS-----CPTCR 325
M S +++ C+IC E + R LPC H F C+ + CP C+
Sbjct: 2 MTSASRRLEDEVTCSICIEHFNDPRVLPCFHSFCLHCLEELAVHSEGRGKLVCPLCK 58
>SB_35671| Best HMM Match : zf-C3HC4 (HMM E-Value=0.01)
Length = 527
Score = 31.1 bits (67), Expect = 2.8
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 279 EVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDASCPTCRRGLAHG 331
EV K+ C IC E + + + +H ++C+ Q + ++ CP C+ L+ G
Sbjct: 244 EVRKDDFYCPICSELLDKPVETIFTHNACDACLTQALAVNSLCPVCKTILSSG 296
>SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 31.1 bits (67), Expect = 2.8
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 279 EVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVR---QWVQQDASCPTCRRGLA 329
E +K + +CAIC + +++ C H + C + + ++ +CP C+ LA
Sbjct: 160 ETKKEEFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETLA 213
>SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 667
Score = 31.1 bits (67), Expect = 2.8
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Query: 282 KNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS-----CPTCR 325
+++ C+IC E + R LPC H F C+ + CP C+
Sbjct: 15 QDEVTCSICIEHFDDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCK 63
>SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 31.1 bits (67), Expect = 2.8
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 279 EVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVR---QWVQQDASCPTCRRGLA 329
E +K + +CAIC + +++ C H + C + + ++ +CP C+ LA
Sbjct: 68 ETKKEEFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETLA 121
>SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15)
Length = 846
Score = 31.1 bits (67), Expect = 2.8
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 279 EVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVR---QWVQQDASCPTCRRGLA 329
E +K + +CAIC + +++ C H + C + + ++ +CP C+ LA
Sbjct: 308 ETKKEEFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETLA 361
Score = 31.1 bits (67), Expect = 2.8
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 279 EVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVR---QWVQQDASCPTCRRGLA 329
E +K + +CAIC + +++ C H + C + + ++ +CP C+ LA
Sbjct: 634 ETKKEEFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETLA 687
>SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06)
Length = 418
Score = 31.1 bits (67), Expect = 2.8
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 279 EVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVR---QWVQQDASCPTCRRGLA 329
E +K + +CAIC + +++ C H + C + + ++ +CP C+ LA
Sbjct: 166 ETKKEEFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETLA 219
>SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 757
Score = 31.1 bits (67), Expect = 2.8
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 279 EVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVR---QWVQQDASCPTCRRGLA 329
E +K + +CAIC + +++ C H + C + + ++ +CP C+ LA
Sbjct: 311 ETKKEEFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETLA 364
>SB_11042| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00013)
Length = 499
Score = 31.1 bits (67), Expect = 2.8
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 287 CAICWEPMKEARKLPCSHLFHNSCVRQWVQQDASCPTCR 325
C+IC C +F + C+ W++ +C +CR
Sbjct: 332 CSICMGVPSTPVVTQCDQIFCSGCITAWLRNAGACSSCR 370
>SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Query: 282 KNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS-----CPTCR 325
+++ C++C E + R LPC H F C+ + CP C+
Sbjct: 10 EDEVTCSLCIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_57032| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 446
Score = 30.7 bits (66), Expect = 3.7
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Query: 283 NQDNCAICWEPMKEARKLP--CSHLFHNSCVRQWVQQD----ASCPTCRRG 327
N C IC E E +L C H C+ +W+ A+CP CR+G
Sbjct: 7 NHMTCIICCEGDDELMELHPCCKQPCHYICLWKWIHAHLTPRATCPHCRKG 57
>SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 30.7 bits (66), Expect = 3.7
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 279 EVEKNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQ---QDASCPTCRRGLA 329
E +K + +CAIC + +++ C H + C + + + +CP C+ LA
Sbjct: 164 ETKKEEFHCAICLDVLEKPLSSKCQHSCCSDCWKSAFELGGKHPACPICQETLA 217
>SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Query: 282 KNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS-----CPTCR 325
+++ C++C E + R LPC H F C+ + CP C+
Sbjct: 10 EDEVTCSLCIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15)
Length = 629
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Query: 282 KNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS-----CPTCR 325
+++ C++C E + R LPC H F C+ + CP C+
Sbjct: 130 EDEVTCSLCIEHFNDPRVLPCLHSFCRHCLEELAVHSEGKGKLVCPLCK 178
>SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2342
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Query: 282 KNQDNCAICWEPMKEARKLPCSHLFHNSCVRQWVQQDAS-----CPTCR 325
+++ C++C E + R LPC H F C+ + CP C+
Sbjct: 10 EDEVTCSLCIEHFNDPRVLPCFHSFCRHCLEELAVHSEGKGKLVCPLCK 58
>SB_23154| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 29.5 bits (63), Expect = 8.4
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 287 CAICWEPMKEARKL-PC-SHLFHNSCVRQWVQQD----ASCPTCRRG 327
C IC E E +L PC H C+ +W+ A+CP CR+G
Sbjct: 11 CIICCEGDDELMELLPCCKQPCHFPCLWKWIHAHLTPRATCPHCRKG 57
>SB_20928| Best HMM Match : NHL (HMM E-Value=0)
Length = 795
Score = 29.5 bits (63), Expect = 8.4
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
Query: 287 CAICWEPMKEARKLPCSHLFHNSCVRQWVQQD------ASCPTCRR 326
C C + + LPC H F + C+ + + +D +CP C R
Sbjct: 15 CPKCMNAYENPKVLPCLHTFCSQCLSEELHRDCEGRLNVTCPKCLR 60
>SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 29.5 bits (63), Expect = 8.4
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 282 KNQDNCAICWEPMKEARKLP-CSHLFHNSCVRQWVQ----QDASCPTCR 325
+++ +C IC+E +E + LP C+H C+ ++ + CP CR
Sbjct: 20 QDEISCPICYEDFEEPKCLPKCAHNICRECLLGIIEKAQLERFECPICR 68
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.326 0.137 0.441
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,429,589
Number of Sequences: 59808
Number of extensions: 547093
Number of successful extensions: 1489
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 1395
Number of HSP's gapped (non-prelim): 126
length of query: 622
length of database: 16,821,457
effective HSP length: 86
effective length of query: 536
effective length of database: 11,677,969
effective search space: 6259391384
effective search space used: 6259391384
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 63 (29.5 bits)
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