Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000196-TA|BGIBMGA000196-PA|IPR000477|RNA-directed DNA
polymerase (Reverse transcriptase)
(175 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 71 2e-14
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 59 7e-11
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 57 3e-10
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 54 2e-09
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 52 7e-09
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 51 2e-08
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 50 5e-08
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 48 2e-07
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 46 6e-07
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 46 6e-07
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 45 1e-06
AJ970247-1|CAI96719.1| 132|Anopheles gambiae putative reverse t... 45 1e-06
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 45 1e-06
AJ970248-1|CAI96720.1| 132|Anopheles gambiae putative reverse t... 42 8e-06
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 41 2e-05
AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse t... 41 2e-05
AJ970250-1|CAI96722.1| 132|Anopheles gambiae putative reverse t... 40 6e-05
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 39 7e-05
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 37 3e-04
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 36 7e-04
AJ970246-1|CAI96718.1| 132|Anopheles gambiae putative reverse t... 35 0.002
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 35 0.002
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 33 0.006
AJ130949-1|CAA10258.1| 401|Anopheles gambiae SG1 protein protein. 27 0.24
AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein pr... 23 5.2
AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dp... 22 9.1
AY344840-1|AAR05811.1| 221|Anopheles gambiae TEP4 protein. 22 9.1
AY344839-1|AAR05810.1| 221|Anopheles gambiae TEP4 protein. 22 9.1
AY344838-1|AAR05809.1| 221|Anopheles gambiae TEP4 protein. 22 9.1
AY344837-1|AAR05808.1| 221|Anopheles gambiae TEP4 protein. 22 9.1
AY344836-1|AAR05807.1| 221|Anopheles gambiae TEP4 protein. 22 9.1
AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase p... 22 9.1
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 71.3 bits (167), Expect = 2e-14
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 12 ASIFMPKQAGFRPGRSCSDQVLALTTLLERGFNENLKSSTVFVDLTAAYDTVAPGTAVQT 71
+S PKQ GF PGRS S +++ T + R F + ++ D AA+D++ +
Sbjct: 572 SSAISPKQHGFMPGRSTSTNLMSFVTNIFRSFEAGTQLDAIYTDFHAAFDSLPHSLLLAK 631
Query: 72 TQADPLYIKIYNVIEDALTNRPFRVHLGDNSSLSRVLNNGLPQGSVLAPTLFNVYTHDVP 131
I + + L+NR RV G S +G+PQG VL+P LF+++ +DV
Sbjct: 632 LSKLGFGDGIISWLSSYLSNRSCRVKTGSYLSEEFFCTSGVPQGCVLSPLLFSLFINDVC 691
Query: 132 ETL--SRKFAYADDLAL 146
L YADD+ +
Sbjct: 692 NVLPPDGHLLYADDIKI 708
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 59.3 bits (137), Expect = 7e-11
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 13/164 (7%)
Query: 19 QAGFRPGRSCSD---QVLALTTLLE-RGFNENLKSSTVFVDLTAAYDTVAPGTAVQTTQA 74
Q GFR GR+ +D +VL++ + R N + V +D+ A+++ + ++ Q
Sbjct: 514 QYGFRKGRATTDAIEKVLSIASASRARNRGANRFCAVVTLDVKNAFNSASWTAIARSLQR 573
Query: 75 DPLYIKIYNVIEDALTNRPFRVHLGDNSSLSRVLNNGLPQGSVLAPTLFN-VYTHDVPET 133
+ +Y++I + NR + + RV+ G+PQGSVL PTL+N +Y + T
Sbjct: 574 INIPKYLYDIIGNYFRNRVLLYETNEGNR-ERVVTAGVPQGSVLGPTLWNLMYNEVLGLT 632
Query: 134 L---SRKFAYADDLALVAQGRSIETTECHLENDMATLNNYFIRW 174
L + +ADD+ LVA G I+ LEN + T N +W
Sbjct: 633 LYDGASLIGFADDIVLVAVGSRID----DLENTIETSINIIRQW 672
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 56.8 bits (131), Expect = 3e-10
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 18 KQAGFRPGRS---CSDQVL-ALTTLLERGFNENLKSSTVFV---DLTAAYDTVAPGTAVQ 70
+Q GFR GRS QV+ A L G N + V D+ A++T + + +
Sbjct: 535 QQFGFRRGRSTLQAIQQVVDAGRRALSLGRTNNRDRRCLMVVALDVRNAFNTASWQSIAE 594
Query: 71 TTQADPLYIKIYNVIEDALTNRPFRVHLGDNSSLSRVLNNGLPQGSVLAPTLFN-----V 125
QA + +++ +++D +R D RV + G+ QGS+L PTL+N V
Sbjct: 595 ALQAKGVPVQLCRILQDYFADRELEYDTADGPVTRRV-SAGVTQGSILGPTLWNIMYDGV 653
Query: 126 YTHDVPETLSRKFAYADDLALVAQGRSIETTECHLENDMATLNNYFIR 173
++PE S +ADDLA++A G E E +A +NN+ ++
Sbjct: 654 LAVELPEGAS-IVGFADDLAILAAGTIPEHAAAIAEEAVAAVNNWMVQ 700
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 54.4 bits (125), Expect = 2e-09
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 15/163 (9%)
Query: 19 QAGFRPGRSCSDQVLALTTLLERGFNENLKS----STVFVDLTAAYDT---VAPGTAVQT 71
Q GFR RS D + + ++ + N S + V +D+T A+++ +A A+Q
Sbjct: 509 QFGFRSRRSTVDAIQRVVDIVSVARSRNRYSGRYCAVVTLDVTNAFNSASWLAIANALQR 568
Query: 72 TQADPLYIKIYNVIEDALTNRPFRVHLGDNSSLSRVLNNGLPQGSVLAPTLFNVYTHDVP 131
P Y+ Y++I D NR D + V +G+PQGSVL PTL+N+ V
Sbjct: 569 INT-PKYL--YDIIGDYFRNRVLMYDTTDGPAEIAV-TSGVPQGSVLGPTLWNLMYDGVL 624
Query: 132 ETL----SRKFAYADDLALVAQGRSIETTECHLENDMATLNNY 170
+R YADD+ L+ +G ++ E + + + ++ +
Sbjct: 625 RVAMVEGARIIGYADDIVLLVEGNCVDDIEILVSSQIRIIDRW 667
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 52.4 bits (120), Expect = 7e-09
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 17 PKQAGFRPGRSCSDQVLALTTL--LERGFNENLKSS-----TVFVDLTAAYDTVAPGTAV 69
P Q GFR G+S +L + + FN V +D+ A++T + +
Sbjct: 545 PNQYGFRRGKSTVQGILRVVQAGRTAKSFNRTNGRDMRCLMVVSLDVRNAFNTASWKSIA 604
Query: 70 QTTQADPLYIKIYNVIEDALTNRPFRVHLGDNSSLSRVLNNGLPQGSVLAPTLFNVYTHD 129
++ + + +++ +T+R V D+ ++R L+ G+PQGS+L PTL+NV
Sbjct: 605 MALRSKEVPASLQKLLQHWMTDRQL-VFDTDDGPVTRNLSTGVPQGSILGPTLWNVMYDS 663
Query: 130 V-----PETLSRKFAYADDLALVAQGRSIETTECHLENDMATLN 168
V PE + A+ADDL L+ G + E E ++ +N
Sbjct: 664 VLDVQLPEG-AEIIAFADDLLLLDPGITPEAASQRAEEAVSAVN 706
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 50.8 bits (116), Expect = 2e-08
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 13 SIFMPKQAGFRPGRSCSDQVLALTTLLERGFNENLKSSTVFVDLTAAYDTVAPGTAVQTT 72
S P Q GF P +S + ++ T + + ++ DL AA+D++ A+
Sbjct: 644 SYLSPYQHGFVPKKSTTTNLVEFVTYCTSQIDAGAQVDAIYTDLKAAFDSLPH--AILLA 701
Query: 73 QADPLYIK--IYNVIEDALTNRPFRVHLGDNSSLSRVLNNGLPQGSVLAPTLFNVYTHDV 130
+ D L I + ++ L +R + V + + S V ++G+PQGS + P LF ++ +DV
Sbjct: 702 KLDKLGIPSPLVQWLKSYLIHRTYIVKIDKHMSKEIVSSSGVPQGSNIGPLLFILFINDV 761
Query: 131 -----PETLSRKFAYADDLALVA 148
P+++S +ADD + A
Sbjct: 762 TLALPPDSIS---LFADDAKIFA 781
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 49.6 bits (113), Expect = 5e-08
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 18/167 (10%)
Query: 18 KQAGFRPGRSCSDQVLALTTLLERGFN----------ENLKSSTVFVDLTAAYDTVAPGT 67
+Q GFR GRS + A+ T++E G + +N V +D+ A++T +
Sbjct: 593 RQHGFRRGRST---IGAIRTVIEAGQSAMRFRRTNGRDNRFLLVVSMDVKNAFNTASWQA 649
Query: 68 AVQTTQADPLYIKIYNVIEDALTNRPFRVHLGDNSSLSRVLNNGLPQGSVLAPTLFNVYT 127
Q + + ++ NR D ++R + G+PQGS+L PTL+N
Sbjct: 650 IATALQMKGVPAGLQRIVRSYFENRELVFETSDGP-VTRSITAGVPQGSILGPTLWNTMY 708
Query: 128 HDVPETL----SRKFAYADDLALVAQGRSIETTECHLENDMATLNNY 170
V + AYADDL L+ G + + E +A+++++
Sbjct: 709 DGVLDVALPQDCEMVAYADDLVLLIPGIDVNAVKAAAEEAVASVSHW 755
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 47.6 bits (108), Expect = 2e-07
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 19 QAGFRPGRSCSDQVLALTTL--LERGFNENLKSS-----TVFVDLTAAYDTVAPGTAVQT 71
Q GFR GRS + +L R F + V +D+ A++T + +
Sbjct: 546 QYGFRRGRSTISAIQSLVDAGKASRSFGQTNNRDKRCLMVVALDVRNAFNTASWQSIANA 605
Query: 72 TQADPLYIKIYNVIEDALTNRPFRVHLGDNSSLSRVLNNGLPQGSVLAPTLFNVYTHDV- 130
+ + + +++ T+R + + + R ++ G+PQGS+L PTL+NV V
Sbjct: 606 LREKGVPSGLLRILQSYFTDRELIFNTSEGPVV-RCVSAGVPQGSILGPTLWNVMYDGVL 664
Query: 131 ----PETLSRKFAYADDLALVAQGRSIETTECHLENDMATLNNY 170
P+ ++ YADDL ++A GR+ E + E ++ ++ +
Sbjct: 665 RIPLPDE-AKVIGYADDLVVLAPGRTPEESAAVAEAAVSAVDQW 707
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 46.0 bits (104), Expect = 6e-07
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 19 QAGFRPGRS---CSDQVL-ALTTLLERGFNENLKSSTVFV---DLTAAYDTVAPGTAVQT 71
Q GFR GRS QV+ A + G N + V D+ A++T + +
Sbjct: 531 QYGFRLGRSTLLAIQQVVNAARRAMSFGRTNNRDRRCLMVVALDVRNAFNTASWQCIAEA 590
Query: 72 TQADPLYIKIYNVIEDALTNRPFRVHLGDNSSLSRVLNNGLPQGSVLAPTLFN-----VY 126
+ + +++ N+++D T+R D RV + G PQGS+L P L+N V
Sbjct: 591 LRDKGVPLQLCNILQDYFTDRELTYDTTDGPVTRRV-SAGCPQGSMLGPRLWNVGYDGVL 649
Query: 127 THDVPETLSRKFAYADDLALVAQGRSIE 154
++PE ++ + DDLA+VA G + E
Sbjct: 650 RLELPEG-AQAVGFVDDLAIVAAGTTPE 676
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 46.0 bits (104), Expect = 6e-07
Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 19 QAGFRPGRSCSDQVLALTTLLERGFNENLKS----STVFVDLTAAYDTV---APGTAVQT 71
Q GFR GRS D + + + ++ K + V VD+ A ++ A G A+Q
Sbjct: 525 QYGFRKGRSTVDAITRVMNNGKVALDKKRKGDRLCAVVTVDVRNALNSANWTAIGQALQR 584
Query: 72 TQADPLYIKIYNVIEDALTNRPFRVHLGDNSSLSRVLNNGLPQGSVLAPTLFNVYTHD-- 129
P + + + + R D +SR ++ G+PQGSVL PTL+NV D
Sbjct: 585 ENTPPYFQAL---LRNYFVGRTLHYDT-DEKVVSRTVSAGVPQGSVLGPTLWNVMYDDLL 640
Query: 130 -VP-ETLSRK-FAYADDLALVAQGRSIE 154
+P E L +ADD+A GR+ E
Sbjct: 641 RLPLEGLRADIIGFADDVAFTFLGRTTE 668
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 45.2 bits (102), Expect = 1e-06
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 18 KQAGFRPGRSCSDQVLALT----TLLERGFNENLKSSTVFVDLTAAYDTV---APGTAVQ 70
+Q GFR GRS + + A+ + L + N + V +D+ A+++ A A+
Sbjct: 504 RQFGFRKGRSTGEAIAAVLKKRRSALLKKRTGNRYCAIVTIDVKNAFNSANWEAIHAALS 563
Query: 71 TTQADPLYIKIYNVIEDALTNRPFRVHLGDNS-SLSRV-LNNGLPQGSVLAPTLFNVYTH 128
P ++ D RV L D + + ++ L G+PQGS+L PTL+NV +
Sbjct: 564 KMMIPPYLCRLLRSYLD------HRVFLYDTALGIKKMSLTAGVPQGSILGPTLWNVMYN 617
Query: 129 DVPETLS-----RKFAYADDLALVAQGRSIETTECHLENDMATLNNYFIRWR 175
V TL +ADD+AL G SIE E + ++ + ++ + R
Sbjct: 618 GV-LTLGLPPGPEVIGFADDIALTVLGESIEEIELLTSDSVSRIESWMQQMR 668
>AJ970247-1|CAI96719.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 44.8 bits (101), Expect = 1e-06
Identities = 25/100 (25%), Positives = 46/100 (46%)
Query: 17 PKQAGFRPGRSCSDQVLALTTLLERGFNENLKSSTVFVDLTAAYDTVAPGTAVQTTQADP 76
P Q GF P RS + ++ + + + L+ ++ DL AA+D ++ +
Sbjct: 33 PNQHGFVPNRSTTTNLMQFVSSCHKSIDARLQVDVIYTDLKAAFDRISHVILLAKLDRLG 92
Query: 77 LYIKIYNVIEDALTNRPFRVHLGDNSSLSRVLNNGLPQGS 116
L + + L R + V +G + S S ++G+PQGS
Sbjct: 93 LPDPLVAWLRSYLMGRTYSVRMGPHLSRSLRASSGVPQGS 132
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 44.8 bits (101), Expect = 1e-06
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 14/144 (9%)
Query: 19 QAGFRPGRSCSDQVLALTTL----LERGFNENLKSSTVFV---DLTAAYDTVAPGTAVQT 71
Q GFR GRS + + + G N + V D+ A++T +
Sbjct: 533 QYGFRRGRSTVQAIQLVVDAGSHAMSFGRTNNRDKRCLLVVALDVRNAFNTASWQCIATA 592
Query: 72 TQADPLYIKIYNVIEDALTNRPFRVHLGDNSSLSRVLNNGLPQGSVLAPTLFN-----VY 126
+ + ++ N++ D NR D RV G+PQGS+L PTL+N V
Sbjct: 593 LEDKGVPRQLRNILRDYFANRELVYDTADGPVTRRV-TAGVPQGSILGPTLWNIMYDGVL 651
Query: 127 THDVPETLSRKFAYADDLALVAQG 150
++PE S YADD+ ++A+G
Sbjct: 652 RVELPEGAS-VIGYADDIVVMARG 674
>AJ970248-1|CAI96720.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 42.3 bits (95), Expect = 8e-06
Identities = 24/100 (24%), Positives = 45/100 (45%)
Query: 17 PKQAGFRPGRSCSDQVLALTTLLERGFNENLKSSTVFVDLTAAYDTVAPGTAVQTTQADP 76
P Q GF P RS + ++ + + + L+ ++ DL AA+D ++ +
Sbjct: 33 PNQHGFVPNRSTTTNLMQFVSSCHKSIDARLQVDVIYTDLKAAFDRISHVILLAKLDRLG 92
Query: 77 LYIKIYNVIEDALTNRPFRVHLGDNSSLSRVLNNGLPQGS 116
L + + L R + V +G + S ++G+PQGS
Sbjct: 93 LPDPLVAWLRSYLMGRTYSVRMGPHLSRFLRASSGVPQGS 132
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 41.1 bits (92), Expect = 2e-05
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 12/155 (7%)
Query: 18 KQAGFRPGRSCSDQVLAL-----TTLLERGFN--ENLKSSTVFVDLTAAYDTVAPGTAVQ 70
+Q GFR GRS + + T + R N +N V +D+ A++T +
Sbjct: 586 RQFGFRRGRSTVSAIQRVVEAGRTAMSFRRTNGRDNRFLLVVALDVKNAFNTANWQSIAS 645
Query: 71 TTQADPLYIKIYNVIEDALTNRPFRVHLGDNSSLSRVLNNGLPQGSVLAPTLFNVY---T 127
QA + + + ++ +R + + V G+PQGS+L PTL+N+
Sbjct: 646 RLQAKGVPVGLQRMLRSYFEDRVLYFDTSEGPVVRHV-TAGVPQGSILGPTLWNIMYDGV 704
Query: 128 HDVPETLS-RKFAYADDLALVAQGRSIETTECHLE 161
DVP YADDLAL+ + + E
Sbjct: 705 LDVPLPPDVEVIGYADDLALLVPATTTDEVRARAE 739
>AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse
transcriptase protein.
Length = 134
Score = 40.7 bits (91), Expect = 2e-05
Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 1 MVSPRISPGVFASIFMPK-QAGFRPGRSCSDQVLALTTLLERGFNENLKSSTVFVDLTAA 59
++ R++ F + +PK Q GFRP S + Q+ +T + + +D A
Sbjct: 18 LLESRMALHTFNNNIIPKSQFGFRPSLSTTHQLHRVTNNIVHNRCNRKSTGLALLDTEKA 77
Query: 60 YDTV-APGTAVQTTQAD-PLYIKIYNVIEDALTNRPFRVHLGDNSSLSRVLNNGLPQGS 116
+D++ G + + + P Y+ N++ ++NR +VH+ +++S + G+PQGS
Sbjct: 78 FDSIWHQGLLSKLIKLNFPSYL--INIVNSFISNRQNKVHILNSTSSTYTPKAGVPQGS 134
>AJ970250-1|CAI96722.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 39.5 bits (88), Expect = 6e-05
Identities = 23/104 (22%), Positives = 45/104 (43%)
Query: 13 SIFMPKQAGFRPGRSCSDQVLALTTLLERGFNENLKSSTVFVDLTAAYDTVAPGTAVQTT 72
S P Q GF P +S + ++ T + + ++ DL +A+D++ +
Sbjct: 29 SYLSPYQHGFVPKKSTTTNLVEFVTYYTSQIDAGAQVDAIYTDLKSAFDSLPHAILLAKL 88
Query: 73 QADPLYIKIYNVIEDALTNRPFRVHLGDNSSLSRVLNNGLPQGS 116
+ ++ L NR + V + + S V ++G+PQGS
Sbjct: 89 NKVRFPCSLVQWLKSYLINRTYIVKIDKHMSKKIVSSSGVPQGS 132
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 39.1 bits (87), Expect = 7e-05
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 104 LSRVLNNGLPQGSVLAPTLFNVY---THDVPETLSRK-FAYADDLALVAQGRSIETTECH 159
+ R ++ G+PQGS+L PTL+N+ V L + YADDL L+ G + T
Sbjct: 693 VERHISAGVPQGSILGPTLWNMMYDGVFGVGLPLGAEIIGYADDLVLLVPGTTPTTAAAA 752
Query: 160 LENDMATLNNYFIRWR 175
E +A + + + R
Sbjct: 753 AEEAVAAVKQWLLEHR 768
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 37.1 bits (82), Expect = 3e-04
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 10/121 (8%)
Query: 57 TAAYDTVAPGTAVQTTQADPLYIKIYNVIEDALTNRPFRVHLGDNSSLSRVLNNGLPQGS 116
TA++ +A TA++T + + +I +R V+ + R + G+PQGS
Sbjct: 577 TASWQAIA--TALRTKRVPA---GLQRIIHSYFQDREL-VYETSEGPVVRSVTAGVPQGS 630
Query: 117 VLAPTLFNVYTHDVPETL----SRKFAYADDLALVAQGRSIETTECHLENDMATLNNYFI 172
+L PTL+N V + + YADDL L+ G + + + E + ++ +
Sbjct: 631 ILGPTLWNTMYDGVLDIALPPDAEILGYADDLVLLVPGTTPDNVKAAAEEAIISVMEWMA 690
Query: 173 R 173
R
Sbjct: 691 R 691
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 35.9 bits (79), Expect = 7e-04
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Query: 52 VFVDLTAAYDTVAPGTAVQTTQADPLYIKIYNVIEDALTNRPFRVHLGDNSSLSRVLNNG 111
V +D+ A++T + + + + + N+I R ++ + R ++ G
Sbjct: 581 VALDICNAFNTASWQSIADALRNKGVPSALLNIIGSYFEERKL-IYNTSAGPVERHISAG 639
Query: 112 LPQGSVLAPTLFNV-YTHDVPETL---SRKFAYADDLALVAQG 150
+PQ S+L PTL+NV Y + L + YADDL L+A G
Sbjct: 640 VPQESILGPTLWNVMYDGVLGVELPPGAELIGYADDLVLLAPG 682
>AJ970246-1|CAI96718.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 34.7 bits (76), Expect = 0.002
Identities = 20/89 (22%), Positives = 38/89 (42%)
Query: 17 PKQAGFRPGRSCSDQVLALTTLLERGFNENLKSSTVFVDLTAAYDTVAPGTAVQTTQADP 76
P Q GF P RS + ++ + + + L+ ++ DL AA+D ++ +
Sbjct: 33 PNQHGFVPNRSTTTNLMQFVSSCHKSIDARLQVDVIYTDLKAAFDRISHVILLAKLDRLG 92
Query: 77 LYIKIYNVIEDALTNRPFRVHLGDNSSLS 105
L + + L R + V +G + S S
Sbjct: 93 LPDPLVAWLRSYLMGRTYSVRMGPHLSRS 121
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 34.7 bits (76), Expect = 0.002
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 18 KQAGFRPGRSCSDQVLALTTLLERGFNENLKS-------STVFVDLTAAYDTVAPGTAVQ 70
+Q GFR RS D +LA+ LE+G + + + +D+ A+++ +
Sbjct: 565 RQFGFRKKRSTVDAILAV---LEKGIAAFQRKRCGARYCALITIDVKNAFNSASWEEIAA 621
Query: 71 TTQADPLYIKIYNVIEDALTNRPFRVHLGDNSSLSRVLNNGLPQGSVLAPTLFNVYTHDV 130
+ + + + + L R + + + + G+PQGSVL TL+NV +D
Sbjct: 622 AVERMKIPPHLCRLSRNYLDGRVLQYDTAEGVK-TNAIPAGVPQGSVLGLTLWNV-IYDG 679
Query: 131 PETLSRKF-----AYADDLALVAQGRSIETTE 157
TL+ +ADD+A+ SIE E
Sbjct: 680 VLTLALPHGVEITGFADDIAITVSAVSIEEVE 711
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 32.7 bits (71), Expect = 0.006
Identities = 26/130 (20%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Query: 13 SIFMPKQAGFRPG-RSCSDQVLALTTLLERGFNENLKSSTVFVDLTAAYDTVAPGTAVQT 71
++ +Q G R + C DQV+ ++ + + ++D AYD+V ++
Sbjct: 563 NVMTEEQTGRRKNTQGCKDQVIIDAVIVGQAAKKQRNLDMAYIDYKKAYDSVPHSYLLKV 622
Query: 72 TQADPLYIKIYNVIEDALTNRPFRVHLGDNSSL--SRVLN--NGLPQGSVLAPTLFNVYT 127
Q + + +++ A+ +H+ D + SR LN G+ QG + F +
Sbjct: 623 LQLYKVDGNVIKLMQHAMGMWSTSLHVTDGKVVLRSRSLNIRRGIFQGDTFSTLWFCLAM 682
Query: 128 HDVPETLSRK 137
+ + TL+++
Sbjct: 683 NPLSRTLNQQ 692
>AJ130949-1|CAA10258.1| 401|Anopheles gambiae SG1 protein protein.
Length = 401
Score = 27.5 bits (58), Expect = 0.24
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 111 GLPQGSVLAPTLFNVYTHDVPETLSRKFAYADDLALVAQGRSIETTECH 159
G P G +L+ + VY+ VPE +F Y D A G S+ H
Sbjct: 165 GQPPGQLLSSIIAAVYS--VPEHAHERFEYLLDFARKVPGNSVRLAFYH 211
>AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein
protein.
Length = 476
Score = 23.0 bits (47), Expect = 5.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 132 ETLSRKFAYADDLALVAQGRSIETTECHLEND 163
E LS+ ++ +++V +GR +E L ND
Sbjct: 429 EFLSKNATFSRPVSVVLKGRLLENPSRRLRND 460
>AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dpp
protein.
Length = 474
Score = 22.2 bits (45), Expect = 9.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 91 NRPFRVHLGDNSSLSRVLNNG 111
N P H+G NS +S V + G
Sbjct: 201 NSPISSHMGPNSPMSSVSSPG 221
>AY344840-1|AAR05811.1| 221|Anopheles gambiae TEP4 protein.
Length = 221
Score = 22.2 bits (45), Expect = 9.1
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 91 NRPFRVHLGDNSSLSRVLNNGLPQGSVLAPTLFNV 125
N P+ + G+ L ++ N P+ + TLF+V
Sbjct: 185 NMPYSIKRGELVELQFIVFNNFPKKYKASVTLFSV 219
>AY344839-1|AAR05810.1| 221|Anopheles gambiae TEP4 protein.
Length = 221
Score = 22.2 bits (45), Expect = 9.1
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 91 NRPFRVHLGDNSSLSRVLNNGLPQGSVLAPTLFNV 125
N P+ + G+ L ++ N P+ + TLF+V
Sbjct: 185 NMPYSIKRGELVELQFIVFNNFPKKYKASVTLFSV 219
>AY344838-1|AAR05809.1| 221|Anopheles gambiae TEP4 protein.
Length = 221
Score = 22.2 bits (45), Expect = 9.1
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 91 NRPFRVHLGDNSSLSRVLNNGLPQGSVLAPTLFNV 125
N P+ + G+ L ++ N P+ + TLF+V
Sbjct: 185 NMPYSIKRGELVELQFIVFNNFPKKYKASVTLFSV 219
>AY344837-1|AAR05808.1| 221|Anopheles gambiae TEP4 protein.
Length = 221
Score = 22.2 bits (45), Expect = 9.1
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 91 NRPFRVHLGDNSSLSRVLNNGLPQGSVLAPTLFNV 125
N P+ + G+ L ++ N P+ + TLF+V
Sbjct: 185 NMPYSIKRGELVELQFIVFNNFPKKYKASVTLFSV 219
>AY344836-1|AAR05807.1| 221|Anopheles gambiae TEP4 protein.
Length = 221
Score = 22.2 bits (45), Expect = 9.1
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 91 NRPFRVHLGDNSSLSRVLNNGLPQGSVLAPTLFNV 125
N P+ + G+ L ++ N P+ + TLF+V
Sbjct: 185 NMPYSIKRGELVELQFIVFNNFPKKYKASVTLFSV 219
>AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 22.2 bits (45), Expect = 9.1
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 71 TTQADPLYIKIYNVIEDALTNRPFRVHLGDNSSLS 105
TT DPL+ + + I+D R+ +S LS
Sbjct: 394 TTMRDPLFYRWHQHIDDIFVRHKQRLPAYTSSELS 428
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.320 0.134 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,704
Number of Sequences: 2123
Number of extensions: 6358
Number of successful extensions: 57
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 32
length of query: 175
length of database: 516,269
effective HSP length: 60
effective length of query: 115
effective length of database: 388,889
effective search space: 44722235
effective search space used: 44722235
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)
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