GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000195-TA|BGIBMGA000195-PA|IPR002492|Transposase,
Tc1/Tc3
         (116 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2GTE9 Cluster: Putative uncharacterized protein; n=2; ...    33   0.92 
UniRef50_UPI0000F2007D Cluster: PREDICTED: similar to transposas...    32   2.1  
UniRef50_Q880M6 Cluster: Glycosyl hydrolase, family 13; n=15; Ps...    32   2.8  
UniRef50_Q9LJB1 Cluster: Similarity to Mutator-like transposase;...    32   2.8  
UniRef50_A2ZPH9 Cluster: Putative uncharacterized protein; n=1; ...    32   2.8  
UniRef50_A2QX09 Cluster: Function: AAA proteins act in a variety...    32   2.8  
UniRef50_Q2A764 Cluster: Transposase; n=2; Ustilago hordei|Rep: ...    31   3.7  
UniRef50_A2RAW8 Cluster: Contig An18c0160, complete genome; n=2;...    31   3.7  
UniRef50_Q9UBM1 Cluster: Phosphatidylethanolamine N-methyltransf...    31   6.5  
UniRef50_Q74F75 Cluster: NAD-dependent dehydrogenase subunit; n=...    30   8.6  

>UniRef50_Q2GTE9 Cluster: Putative uncharacterized protein; n=2;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 349

 Score = 33.5 bits (73), Expect = 0.92
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%)

Query: 5   VIRHKNEAFHADCLKRKEKFPVSLMTWMTWGCMSAK-GVGGIL-WKILWYAVCGWFY 59
           V R ++EA+   C+  +E+ P     WM WG  S K G G  L W+  W ++ G  Y
Sbjct: 175 VTRRQDEAYDPTCIVEREQRPKG---WMFWGSYSVKYGKGPCLFWEKDWGSITGEKY 228


>UniRef50_UPI0000F2007D Cluster: PREDICTED: similar to transposase
           (putative); n=1; Danio rerio|Rep: PREDICTED: similar to
           transposase (putative) - Danio rerio
          Length = 244

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 3/40 (7%)

Query: 4   KVIRHKNEAFHADCLKRKEKFPVSLMTWMTWGCMSAKGVG 43
           +V R   E     CLK   K+P    T M WG MSA GVG
Sbjct: 103 RVWRKTGEMEMPKCLKSSVKYP---QTVMVWGAMSAAGVG 139


>UniRef50_Q880M6 Cluster: Glycosyl hydrolase, family 13; n=15;
           Pseudomonadaceae|Rep: Glycosyl hydrolase, family 13 -
           Pseudomonas syringae pv. tomato
          Length = 927

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 14/23 (60%), Positives = 17/23 (73%)

Query: 11  EAFHADCLKRKEKFPVSLMTWMT 33
           E FHA CL+R EKFP +L+T  T
Sbjct: 579 EDFHAVCLERLEKFPDNLLTTAT 601


>UniRef50_Q9LJB1 Cluster: Similarity to Mutator-like transposase;
           n=3; Arabidopsis thaliana|Rep: Similarity to
           Mutator-like transposase - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 170

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)

Query: 44  GILWKILWYAVCGWFYQV--CEVSKPFGREFSTLYSV 78
           G LW++  Y VC + YQV  C +S P   +FS ++SV
Sbjct: 119 GTLWRVRNYWVCYYRYQVFHCILSIPLYSQFSLVFSV 155


>UniRef50_A2ZPH9 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 454

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 15/46 (32%), Positives = 19/46 (41%)

Query: 10  NEAFHADCLKRKEKFPVSLMTWMTWGCMSAKGVGGILWKILWYAVC 55
           N  F    +KRK+  P+   TW T   M     G +LW   W   C
Sbjct: 240 NPEFTLKPIKRKKGKPLDSYTWNTMPAMPRSCFGAMLWTSSWPRTC 285


>UniRef50_A2QX09 Cluster: Function: AAA proteins act in a variety of
           cellular functions; n=2; Pezizomycotina|Rep: Function:
           AAA proteins act in a variety of cellular functions -
           Aspergillus niger
          Length = 949

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 58  FYQVCEVSKPFGREFSTLYSVTQATRFLHFSTGWCFLPYCK 98
           F QVC +++ F +  +T++ + +  R  H     C LPY K
Sbjct: 876 FEQVCNMTRDFKQYLTTVHGIDEEDRAFHAKARVCNLPYQK 916


>UniRef50_Q2A764 Cluster: Transposase; n=2; Ustilago hordei|Rep:
           Transposase - Ustilago hordei (Smut fungus)
          Length = 339

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)

Query: 9   KNEAFHADCLKRKEKFPVSLMTWMTWGCMSAKGVGGI 45
           KN  F++  ++   KF  S +  M WGCM+ +GVGG+
Sbjct: 166 KNAGFNSKLVRPTVKFGSSSI--MIWGCMTWEGVGGM 200


>UniRef50_A2RAW8 Cluster: Contig An18c0160, complete genome; n=2;
           Pezizomycotina|Rep: Contig An18c0160, complete genome -
           Aspergillus niger
          Length = 509

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 5/52 (9%)

Query: 2   KGKVIRHKNEAFHADCLKRKEKFPVSLMTWMTWGCMSAKGVGGILWKILWYA 53
           + K I     AFH + LKR    P  L+T + WGC S  G   +L+ I  YA
Sbjct: 252 RNKAIGAVQIAFHTELLKR----PEFLLT-LAWGCFSVLGYVALLFSIPDYA 298


>UniRef50_Q9UBM1 Cluster: Phosphatidylethanolamine
          N-methyltransferase; n=18; Euteleostomi|Rep:
          Phosphatidylethanolamine N-methyltransferase - Homo
          sapiens (Human)
          Length = 199

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 49 ILWYAVCGWFYQVCEVSKPFGREFSTLYSVTQATRFLHFSTGWCF 93
          + W  V  W ++  ++S+ FG  +   YS++     L+F    CF
Sbjct: 27 LYWNVVARWEHKTRKLSRAFGSPYLACYSLSVTILLLNFLRSHCF 71


>UniRef50_Q74F75 Cluster: NAD-dependent dehydrogenase subunit; n=10;
           Desulfuromonadales|Rep: NAD-dependent dehydrogenase
           subunit - Geobacter sulfurreducens
          Length = 668

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 44  GILWKILW--YAVCGWFYQVCEVSKPFGREFSTLYSVT 79
           G+L+ + W   AV  WF    + +KP  R+  TLY +T
Sbjct: 142 GVLFLVAWEIMAVSAWFVLTADHAKPEVRDAGTLYLIT 179


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.327    0.140    0.506 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,672,815
Number of Sequences: 1657284
Number of extensions: 4767383
Number of successful extensions: 10544
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 10539
Number of HSP's gapped (non-prelim): 10
length of query: 116
length of database: 575,637,011
effective HSP length: 90
effective length of query: 26
effective length of database: 426,481,451
effective search space: 11088517726
effective search space used: 11088517726
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 65 (30.3 bits)