GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000195-TA|BGIBMGA000195-PA|IPR002492|Transposase,
Tc1/Tc3
         (116 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    20   7.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    20   7.1  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    20   7.1  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    19   9.4  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    19   9.4  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    19   9.4  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    19   9.4  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    19   9.4  

>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
          protein 11 protein.
          Length = 127

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 7/16 (43%), Positives = 9/16 (56%)

Query: 7  RHKNEAFHADCLKRKE 22
          RH  +A H +C K  E
Sbjct: 65 RHLPDALHTECSKCSE 80


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 7/18 (38%), Positives = 10/18 (55%)

Query: 28  LMTWMTWGCMSAKGVGGI 45
           L  W+ +GC   K + GI
Sbjct: 249 LQLWVDYGCSPKKLIVGI 266


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory
          receptor candidate 20 protein.
          Length = 393

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 8/24 (33%), Positives = 12/24 (50%)

Query: 36 CMSAKGVGGILWKILWYAVCGWFY 59
          C S KG    L   + Y +CG+ +
Sbjct: 31 CSSQKGQKTCLNLSINYCICGYIF 54


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)

Query: 96  YCKDNNDVTIGGK 108
           +C D N+VTI G+
Sbjct: 179 FCGDPNNVTIFGE 191


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)

Query: 96  YCKDNNDVTIGGK 108
           +C D N+VTI G+
Sbjct: 179 FCGDPNNVTIFGE 191


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)

Query: 96  YCKDNNDVTIGGK 108
           +C D N+VTI G+
Sbjct: 179 FCGDPNNVTIFGE 191


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)

Query: 96  YCKDNNDVTIGGK 108
           +C D N+VTI G+
Sbjct: 179 FCGDPNNVTIFGE 191


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)

Query: 96  YCKDNNDVTIGGK 108
           +C D N+VTI G+
Sbjct: 178 FCGDPNNVTIFGE 190


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.327    0.140    0.506 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,336
Number of Sequences: 317
Number of extensions: 1149
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 116
length of database: 114,650
effective HSP length: 50
effective length of query: 66
effective length of database: 98,800
effective search space:  6520800
effective search space used:  6520800
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.8 bits)
S2: 38 (19.4 bits)