GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000195-TA|BGIBMGA000195-PA|IPR002492|Transposase,
Tc1/Tc3
         (116 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89804-1|AAD03795.1|   89|Anopheles gambiae Tc1-like transposase...    29   0.056
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    22   4.9  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    22   6.4  
DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    21   8.5  

>U89804-1|AAD03795.1|   89|Anopheles gambiae Tc1-like transposase
          protein.
          Length = 89

 Score = 28.7 bits (61), Expect = 0.056
 Identities = 10/16 (62%), Positives = 10/16 (62%)

Query: 32 MTWGCMSAKGVGGILW 47
          M WGC S  GVG I W
Sbjct: 4  MVWGCFSRYGVGPIFW 19


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query: 32  MTWGCMSAKGVGGIL 46
           M WGC S  G+G ++
Sbjct: 104 MVWGCFSYYGMGPLV 118


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/19 (57%), Positives = 12/19 (63%)

Query: 63   EVSKPFGREFSTLYSVTQA 81
            EV + FG  FSTL   TQA
Sbjct: 1034 EVDENFGSIFSTLLPGTQA 1052


>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
           carbonic anhydrase protein.
          Length = 318

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 12/28 (42%), Positives = 13/28 (46%)

Query: 40  KGVGGILWKILWYAVCGWFYQVCEVSKP 67
           K VG  L       V G+FYQV E   P
Sbjct: 163 KSVGEALGYSDGLTVLGFFYQVTEQDAP 190


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.327    0.140    0.506 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,664
Number of Sequences: 2123
Number of extensions: 4629
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 4
length of query: 116
length of database: 516,269
effective HSP length: 56
effective length of query: 60
effective length of database: 397,381
effective search space: 23842860
effective search space used: 23842860
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 43 (21.4 bits)