GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000195-TA|BGIBMGA000195-PA|IPR002492|Transposase,
Tc1/Tc3
         (116 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC050593-1|AAH50593.1|  236|Homo sapiens phosphatidylethanolamin...    31   1.2  
AF294468-1|AAK19172.1|  199|Homo sapiens phosphatidylethanolamin...    31   1.2  
AF176807-1|AAD53292.1|  199|Homo sapiens phosphatidylethanolamin...    31   1.2  
AF176806-1|AAD53291.1|  199|Homo sapiens phosphatidylethanolamin...    31   1.2  
AF113126-1|AAF14867.1|  236|Homo sapiens phosphotidylethanolamin...    31   1.2  
AF044214-1|AAQ13425.1|  199|Homo sapiens phosphatidylethanolamin...    31   1.2  
CR457099-1|CAG33380.1|  199|Homo sapiens PEMT protein.                 30   1.5  
BC000557-1|AAH00557.1|  236|Homo sapiens phosphatidylethanolamin...    30   1.5  
AB029821-1|BAA82407.1|  199|Homo sapiens phosphatidylethanolamin...    30   1.5  

>BC050593-1|AAH50593.1|  236|Homo sapiens phosphatidylethanolamine
           N-methyltransferase protein.
          Length = 236

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 49  ILWYAVCGWFYQVCEVSKPFGREFSTLYSVTQATRFLHFSTGWCF 93
           + W  V  W ++  ++S+ FG  +   YS++     L+F    CF
Sbjct: 64  LYWNVVARWEHKTRKLSRAFGSPYLACYSLSVTILLLNFLRSHCF 108


>AF294468-1|AAK19172.1|  199|Homo sapiens phosphatidylethanolamine
          N-methyltransferase protein.
          Length = 199

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 49 ILWYAVCGWFYQVCEVSKPFGREFSTLYSVTQATRFLHFSTGWCF 93
          + W  V  W ++  ++S+ FG  +   YS++     L+F    CF
Sbjct: 27 LYWNVVARWEHKTRKLSRAFGSPYLACYSLSVTILLLNFLRSHCF 71


>AF176807-1|AAD53292.1|  199|Homo sapiens phosphatidylethanolamine
          N-methyltransferase protein.
          Length = 199

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 49 ILWYAVCGWFYQVCEVSKPFGREFSTLYSVTQATRFLHFSTGWCF 93
          + W  V  W ++  ++S+ FG  +   YS++     L+F    CF
Sbjct: 27 LYWNVVARWEHKTRKLSRAFGSPYLACYSLSVTILLLNFLRSHCF 71


>AF176806-1|AAD53291.1|  199|Homo sapiens phosphatidylethanolamine
          N-methyltransferase protein.
          Length = 199

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 49 ILWYAVCGWFYQVCEVSKPFGREFSTLYSVTQATRFLHFSTGWCF 93
          + W  V  W ++  ++S+ FG  +   YS++     L+F    CF
Sbjct: 27 LYWNVVARWEHKTRKLSRAFGSPYLACYSLSVTILLLNFLRSHCF 71


>AF113126-1|AAF14867.1|  236|Homo sapiens phosphotidylethanolamine
           N-methyltransferase protein.
          Length = 236

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 49  ILWYAVCGWFYQVCEVSKPFGREFSTLYSVTQATRFLHFSTGWCF 93
           + W  V  W ++  ++S+ FG  +   YS++     L+F    CF
Sbjct: 64  LYWNVVARWEHKTRKLSRAFGSPYLACYSLSVTILLLNFLRSHCF 108


>AF044214-1|AAQ13425.1|  199|Homo sapiens
          phosphatidylethanolamine-N-methyltransferase- like
          protein protein.
          Length = 199

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 49 ILWYAVCGWFYQVCEVSKPFGREFSTLYSVTQATRFLHFSTGWCF 93
          + W  V  W ++  ++S+ FG  +   YS++     L+F    CF
Sbjct: 27 LYWNVVARWEHKTRKLSRAFGSPYLACYSLSVTILLLNFLRSHCF 71


>CR457099-1|CAG33380.1|  199|Homo sapiens PEMT protein.
          Length = 199

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 49 ILWYAVCGWFYQVCEVSKPFGREFSTLYSVTQATRFLHFSTGWCF 93
          + W  V  W ++  ++S+ FG  +   YS++     L+F    CF
Sbjct: 27 LYWNVVARWEHKTRKLSRAFGSPYLACYSLSITILLLNFLRSHCF 71


>BC000557-1|AAH00557.1|  236|Homo sapiens phosphatidylethanolamine
           N-methyltransferase protein.
          Length = 236

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 49  ILWYAVCGWFYQVCEVSKPFGREFSTLYSVTQATRFLHFSTGWCF 93
           + W  V  W ++  ++S+ FG  +   YS++     L+F    CF
Sbjct: 64  LYWNVVARWEHKTRKLSRAFGSPYLACYSLSITILLLNFLRSHCF 108


>AB029821-1|BAA82407.1|  199|Homo sapiens phosphatidylethanolamine
          N-methyltransferase protein.
          Length = 199

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 49 ILWYAVCGWFYQVCEVSKPFGREFSTLYSVTQATRFLHFSTGWCF 93
          + W  V  W ++  ++S+ FG  +   YS++     L+F    CF
Sbjct: 27 LYWNVVARWEHKTRKLSRAFGSPYLACYSLSITILLLNFLRSHCF 71


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.327    0.140    0.506 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,645,383
Number of Sequences: 224733
Number of extensions: 701336
Number of successful extensions: 1252
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1243
Number of HSP's gapped (non-prelim): 9
length of query: 116
length of database: 73,234,838
effective HSP length: 80
effective length of query: 36
effective length of database: 55,256,198
effective search space: 1989223128
effective search space used: 1989223128
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 59 (27.9 bits)