GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000194-TA|BGIBMGA000194-PA|undefined
         (271 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6LGG3 Cluster: Putative uncharacterized protein; n=1; ...    34   4.4  
UniRef50_A3VQW9 Cluster: Putative uncharacterized protein; n=1; ...    33   7.7  
UniRef50_Q54F35 Cluster: Putative uncharacterized protein; n=1; ...    33   7.7  

>UniRef50_A6LGG3 Cluster: Putative uncharacterized protein; n=1;
           Parabacteroides distasonis ATCC 8503|Rep: Putative
           uncharacterized protein - Parabacteroides distasonis
           (strain ATCC 8503 / DSM 20701 / NCTC11152)
          Length = 265

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 103 TSFNIHFRGNDYLVDNKFIKDKWVEILK-GNGLEYKDFSTTDNTNW 147
           T+F+I+  G+D +VD +F +D    + K G  + YK+F   D+ +W
Sbjct: 202 TAFSIYHGGSDSVVDVQFSRDANEALKKAGADVRYKEFPGVDHNSW 247


>UniRef50_A3VQW9 Cluster: Putative uncharacterized protein; n=1;
           Parvularcula bermudensis HTCC2503|Rep: Putative
           uncharacterized protein - Parvularcula bermudensis
           HTCC2503
          Length = 903

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 25/97 (25%), Positives = 35/97 (36%)

Query: 135 EYKDFSTTDNTNWYGTMGPYVDMFAAYALRTNELRLGHNNMPITKQDGVHKSFPVSKYGL 194
           +Y      D   WY     YVD+  A  LR +   L  ++ P   + G        K G 
Sbjct: 351 DYLKPEVLDEAQWYDAFREYVDVSVANELRADADHLAKSDAPDLSKIGRLLQEAFKKPGR 410

Query: 195 SGAHHVLLEGTSFPPERRSSIVQSLGAMTAWLCMLRS 231
           S   H +   T   PE R +I     A+   L   R+
Sbjct: 411 SFYAHTIRSVTGLIPEIREAISSRTEAINRILTRARN 447


>UniRef50_Q54F35 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 301

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 95  NMIKKTATTSFNIHFRGNDYLVDNKFIKDKWVEILKGNG 133
           + IK+T    FNI  + ND  V+N+F+ D + +   G G
Sbjct: 195 SQIKRTDINIFNIERKRNDQFVENRFLADYYFDTCGGGG 233


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.320    0.135    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 272,333,042
Number of Sequences: 1657284
Number of extensions: 10379239
Number of successful extensions: 20816
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 20814
Number of HSP's gapped (non-prelim): 3
length of query: 271
length of database: 575,637,011
effective HSP length: 99
effective length of query: 172
effective length of database: 411,565,895
effective search space: 70789333940
effective search space used: 70789333940
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 72 (33.1 bits)