GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000194-TA|BGIBMGA000194-PA|undefined
         (271 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            28   0.33 
AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal ...    28   0.33 

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 5/106 (4%)

Query: 68  ITVGNHIVSI--IFTIHNVCRQEVKNTSTNMIKKTATTSFNIHFRGNDYLVDNKFIKDKW 125
           I+VG   V +  + T+  +      N +   ++K+    F IH  GN +L+ +    D W
Sbjct: 799 ISVGKKFVVLCDLKTLRVLTINHKGNLNDTEVQKSLPPKFLIHTFGNGFLMCSASSIDVW 858

Query: 126 VEILKGNGLEYKDFSTTDNTNWYGTMGPYVDMFAAYALRTNELRLG 171
              +K    E++  ST   TN +  +   ++ F   A  +  LR G
Sbjct: 859 TMGIKN---EWQKGSTQAPTNIFTDIDKLLNAFVLDAEFSTALRKG 901


>AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal
           carrier protein TOL-2 protein.
          Length = 248

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 7/43 (16%)

Query: 95  NMIKKTA-TTSFNIH----FRGNDYLVDN--KFIKDKWVEILK 130
           N IK T  TT F +H    F G+  L DN  +F+ D W +ILK
Sbjct: 171 NKIKATFDTTRFYMHLTNLFNGDKALGDNMNQFLNDNWEDILK 213


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.135    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,687
Number of Sequences: 2123
Number of extensions: 9579
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 2
length of query: 271
length of database: 516,269
effective HSP length: 63
effective length of query: 208
effective length of database: 382,520
effective search space: 79564160
effective search space used: 79564160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)