Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000193-TA|BGIBMGA000193-PA|IPR013106|Immunoglobulin
V-set, IPR007110|Immunoglobulin-like, IPR003599|Immunoglobulin subtype
(202 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110487-14|CAB54429.2| 268|Caenorhabditis elegans Hypothetical... 53 2e-07
AF456253-1|AAL59611.1| 268|Caenorhabditis elegans secreted 2-im... 53 2e-07
Z81045-4|CAB54202.2| 402|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z81045-3|CAB02817.3| 280|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr... 36 0.015
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr... 36 0.015
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 36 0.027
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 36 0.027
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 33 0.11
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 33 0.11
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 33 0.11
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 33 0.11
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 33 0.11
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 33 0.11
U40942-9|AAC47074.6| 703|Caenorhabditis elegans Synaptogenesis ... 32 0.25
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 31 0.43
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 31 0.43
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 31 0.43
Z48582-7|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 30 1.3
AL110487-17|CAH10818.1| 304|Caenorhabditis elegans Hypothetical... 29 1.7
AL110487-16|CAH10817.1| 307|Caenorhabditis elegans Hypothetical... 29 1.7
AL110487-15|CAB54432.1| 395|Caenorhabditis elegans Hypothetical... 29 1.7
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 29 3.0
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 29 3.0
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 3.0
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 3.0
Z48178-5|CAA88205.1| 413|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z34533-8|CAA84297.2| 616|Caenorhabditis elegans Hypothetical pr... 28 4.0
AY552607-1|AAS89254.1| 616|Caenorhabditis elegans heparan sulfa... 28 4.0
Z69664-7|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical pr... 27 7.0
U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1... 27 7.0
U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1... 27 7.0
U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1... 27 7.0
AF047881-1|AAC27552.1| 942|Caenorhabditis elegans truncated CLR... 27 7.0
AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein. 27 7.0
Z47808-9|CAI46561.1| 425|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical pr... 27 9.3
>AL110487-14|CAB54429.2| 268|Caenorhabditis elegans Hypothetical
protein Y39E4B.8 protein.
Length = 268
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/70 (30%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 93 AFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLHSEGSDDWILQIKYVQKR 152
A+LHC V E ++W R D ++++G +T D R+QV + ++ W+L ++ +++
Sbjct: 53 AYLHCSVPPDAEHEIAWTRVSDGALLTAGNRTFTRDPRWQV-SKKSANIWVLNLRRAEQQ 111
Query: 153 DNGTYECQVS 162
D+G Y C+++
Sbjct: 112 DSGCYLCEIN 121
>AF456253-1|AAL59611.1| 268|Caenorhabditis elegans secreted
2-immunoglobulin-domainprotein ZIG-8 protein.
Length = 268
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/70 (30%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 93 AFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLHSEGSDDWILQIKYVQKR 152
A+LHC V E ++W R D ++++G +T D R+QV + ++ W+L ++ +++
Sbjct: 53 AYLHCSVPPDAEHEIAWTRVSDGALLTAGNRTFTRDPRWQV-SKKSANIWVLNLRRAEQQ 111
Query: 153 DNGTYECQVS 162
D+G Y C+++
Sbjct: 112 DSGCYLCEIN 121
>Z81045-4|CAB54202.2| 402|Caenorhabditis elegans Hypothetical
protein C36F7.4b protein.
Length = 402
Score = 42.3 bits (95), Expect = 2e-04
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 11/130 (8%)
Query: 41 VVVSHSDLTE----LAELAGVVPAWRELWLGSLDALHREPSINNTQEDVLAQLGAVAFLH 96
V++ H L E A L GV+ +++ ++PS+++ +A LG
Sbjct: 50 VILFHIPLQEKMYLFALLCGVLLVFKQACSRGAPPTIQQPSMSSA----VALLGQDVDFT 105
Query: 97 CPVRNLGERGVSWVRRRDW-HIISSGVLMYTNDERFQVLHSEGS--DDWILQIKYVQKRD 153
C V +LG V++V+ ++S ++ ++++ G ++W+L IK VQ+ D
Sbjct: 106 CIVNDLGSHMVAFVKADSPPRLLSFDEKVFRRRNKYELKPRIGDLHNEWVLTIKNVQESD 165
Query: 154 NGTYECQVST 163
G Y CQ++T
Sbjct: 166 RGNYSCQINT 175
>Z81045-3|CAB02817.3| 280|Caenorhabditis elegans Hypothetical
protein C36F7.4a protein.
Length = 280
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 86 LAQLGAVAFLHCPVRNLGERGVSWVRRRDW-HIISSGVLMYTNDERFQVLHSEGS--DDW 142
+A LG C V +LG V++V+ ++S ++ ++++ G ++W
Sbjct: 5 VALLGQDVDFTCIVNDLGSHMVAFVKADSPPRLLSFDEKVFRRRNKYELKPRIGDLHNEW 64
Query: 143 ILQIKYVQKRDNGTYECQVST 163
+L IK VQ+ D G Y CQ++T
Sbjct: 65 VLTIKNVQESDRGNYSCQINT 85
>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 36.3 bits (80), Expect = 0.015
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 46 SDLTELAELAGVVPAWRELWLGSLDALHREPSINNTQEDVLAQLGAVAFLHCPVR----- 100
S + E AE+ G W L DA S + V+ + + F PV+
Sbjct: 199 SPVLEFAEIPGC--DWSSLSWNPSDASQLIVSSQSQHASVIQKWDS-RFTSTPVKEYRHH 255
Query: 101 NLGERGVSWVRRRDWHIISSGV---LMYTNDERFQVLHSEGS--DDWILQIKYVQKRDNG 155
N+G V W + D +ISSG ++ N E +VL GS DWI +K+ ++ +
Sbjct: 256 NMGITSVDWNKADDRLVISSGCDGQVVIWNHETSEVLGGVGSLQGDWIRNVKWNEEEPSQ 315
Query: 156 ------TYECQVSTCQLSGTTEPSPTVPASTMTCNRQPAGH 190
+ Q+S+ G+ +P V A+ ++ PA H
Sbjct: 316 FAIQYFQHPVQISSLTSLGSPQPGADVLAARISDQFVPAWH 356
>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 36.3 bits (80), Expect = 0.015
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 46 SDLTELAELAGVVPAWRELWLGSLDALHREPSINNTQEDVLAQLGAVAFLHCPVR----- 100
S + E AE+ G W L DA S + V+ + + F PV+
Sbjct: 199 SPVLEFAEIPGC--DWSSLSWNPSDASQLIVSSQSQHASVIQKWDS-RFTSTPVKEYRHH 255
Query: 101 NLGERGVSWVRRRDWHIISSGV---LMYTNDERFQVLHSEGS--DDWILQIKYVQKRDNG 155
N+G V W + D +ISSG ++ N E +VL GS DWI +K+ ++ +
Sbjct: 256 NMGITSVDWNKADDRLVISSGCDGQVVIWNHETSEVLGGVGSLQGDWIRNVKWNEEEPSQ 315
Query: 156 ------TYECQVSTCQLSGTTEPSPTVPASTMTCNRQPAGH 190
+ Q+S+ G+ +P V A+ ++ PA H
Sbjct: 316 FAIQYFQHPVQISSLTSLGSPQPGADVLAARISDQFVPAWH 356
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 35.5 bits (78), Expect = 0.027
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 13/76 (17%)
Query: 84 DVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLHSEGSDDWI 143
+V LG AFLHC R+ GE + W R + V N ER +
Sbjct: 528 NVSVPLGEAAFLHCSTRSAGEVEIRWTR------YGATVFNGPNTER-------NPTNGT 574
Query: 144 LQIKYVQKRDNGTYEC 159
L+I +V + D G YEC
Sbjct: 575 LKIHHVTRADAGVYEC 590
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 86 LAQLGAVAFLHCPVRNLGERGVSWVRR-RDWHIISSGVLMYTNDERFQVLHSEGSD 140
LA + +L CP+ + + V W + D ++ S V++ N+E F + + + +D
Sbjct: 3585 LAIVARTIYLECPISGIPQPDVIWTKNGMDINMTDSRVILAQNNETFGIENVQVTD 3640
Score = 28.7 bits (61), Expect = 3.0
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 13/85 (15%)
Query: 76 PSINNTQEDVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLH 135
PS+ T +DV + L C + V W + H++ ND ++QV
Sbjct: 611 PSVKVTPQDVYFNMREGVNLSCEAMGDPKPEVHWYFKGR-HLL--------NDYKYQV-- 659
Query: 136 SEGSDDWILQIKYVQKRDNGTYECQ 160
G D L I+ D GTYEC+
Sbjct: 660 --GQDSKFLYIRDATHHDEGTYECR 682
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 35.5 bits (78), Expect = 0.027
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 13/76 (17%)
Query: 84 DVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLHSEGSDDWI 143
+V LG AFLHC R+ GE + W R + V N ER +
Sbjct: 528 NVSVPLGEAAFLHCSTRSAGEVEIRWTR------YGATVFNGPNTER-------NPTNGT 574
Query: 144 LQIKYVQKRDNGTYEC 159
L+I +V + D G YEC
Sbjct: 575 LKIHHVTRADAGVYEC 590
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 86 LAQLGAVAFLHCPVRNLGERGVSWVRR-RDWHIISSGVLMYTNDERFQVLHSEGSD 140
LA + +L CP+ + + V W + D ++ S V++ N+E F + + + +D
Sbjct: 3585 LAIVARTIYLECPISGIPQPDVIWTKNGMDINMTDSRVILAQNNETFGIENVQVTD 3640
Score = 28.7 bits (61), Expect = 3.0
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 13/85 (15%)
Query: 76 PSINNTQEDVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLH 135
PS+ T +DV + L C + V W + H++ ND ++QV
Sbjct: 611 PSVKVTPQDVYFNMREGVNLSCEAMGDPKPEVHWYFKGR-HLL--------NDYKYQV-- 659
Query: 136 SEGSDDWILQIKYVQKRDNGTYECQ 160
G D L I+ D GTYEC+
Sbjct: 660 --GQDSKFLYIRDATHHDEGTYECR 682
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 35.5 bits (78), Expect = 0.027
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 13/76 (17%)
Query: 84 DVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLHSEGSDDWI 143
+V LG AFLHC R+ GE + W R + V N ER +
Sbjct: 528 NVSVPLGEAAFLHCSTRSAGEVEIRWTR------YGATVFNGPNTER-------NPTNGT 574
Query: 144 LQIKYVQKRDNGTYEC 159
L+I +V + D G YEC
Sbjct: 575 LKIHHVTRADAGVYEC 590
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 86 LAQLGAVAFLHCPVRNLGERGVSWVRR-RDWHIISSGVLMYTNDERFQVLHSEGSD 140
LA + +L CP+ + + V W + D ++ S V++ N+E F + + + +D
Sbjct: 3585 LAIVARTIYLECPISGIPQPDVIWTKNGMDINMTDSRVILAQNNETFGIENVQVTD 3640
Score = 28.7 bits (61), Expect = 3.0
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 13/85 (15%)
Query: 76 PSINNTQEDVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLH 135
PS+ T +DV + L C + V W + H++ ND ++QV
Sbjct: 611 PSVKVTPQDVYFNMREGVNLSCEAMGDPKPEVHWYFKGR-HLL--------NDYKYQV-- 659
Query: 136 SEGSDDWILQIKYVQKRDNGTYECQ 160
G D L I+ D GTYEC+
Sbjct: 660 --GQDSKFLYIRDATHHDEGTYECR 682
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 35.5 bits (78), Expect = 0.027
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 13/76 (17%)
Query: 84 DVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLHSEGSDDWI 143
+V LG AFLHC R+ GE + W R + V N ER +
Sbjct: 528 NVSVPLGEAAFLHCSTRSAGEVEIRWTR------YGATVFNGPNTER-------NPTNGT 574
Query: 144 LQIKYVQKRDNGTYEC 159
L+I +V + D G YEC
Sbjct: 575 LKIHHVTRADAGVYEC 590
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 86 LAQLGAVAFLHCPVRNLGERGVSWVRR-RDWHIISSGVLMYTNDERFQVLHSEGSD 140
LA + +L CP+ + + V W + D ++ S V++ N+E F + + + +D
Sbjct: 3585 LAIVARTIYLECPISGIPQPDVIWTKNGMDINMTDSRVILAQNNETFGIENVQVTD 3640
Score = 28.7 bits (61), Expect = 3.0
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 13/85 (15%)
Query: 76 PSINNTQEDVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLH 135
PS+ T +DV + L C + V W + H++ ND ++QV
Sbjct: 611 PSVKVTPQDVYFNMREGVNLSCEAMGDPKPEVHWYFKGR-HLL--------NDYKYQV-- 659
Query: 136 SEGSDDWILQIKYVQKRDNGTYECQ 160
G D L I+ D GTYEC+
Sbjct: 660 --GQDSKFLYIRDATHHDEGTYECR 682
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 35.5 bits (78), Expect = 0.027
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 13/76 (17%)
Query: 84 DVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLHSEGSDDWI 143
+V LG AFLHC R+ GE + W R + V N ER +
Sbjct: 528 NVSVPLGEAAFLHCSTRSAGEVEIRWTR------YGATVFNGPNTER-------NPTNGT 574
Query: 144 LQIKYVQKRDNGTYEC 159
L+I +V + D G YEC
Sbjct: 575 LKIHHVTRADAGVYEC 590
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 86 LAQLGAVAFLHCPVRNLGERGVSWVRR-RDWHIISSGVLMYTNDERFQVLHSEGSD 140
LA + +L CP+ + + V W + D ++ S V++ N+E F + + + +D
Sbjct: 3585 LAIVARTIYLECPISGIPQPDVIWTKNGMDINMTDSRVILAQNNETFGIENVQVTD 3640
Score = 28.7 bits (61), Expect = 3.0
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 13/85 (15%)
Query: 76 PSINNTQEDVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLH 135
PS+ T +DV + L C + V W + H++ ND ++QV
Sbjct: 611 PSVKVTPQDVYFNMREGVNLSCEAMGDPKPEVHWYFKGR-HLL--------NDYKYQV-- 659
Query: 136 SEGSDDWILQIKYVQKRDNGTYECQ 160
G D L I+ D GTYEC+
Sbjct: 660 --GQDSKFLYIRDATHHDEGTYECR 682
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 33.5 bits (73), Expect = 0.11
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 9/88 (10%)
Query: 84 DVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLHSEGSDDWI 143
D+ LG V L C V L V W + G L+ D RF+ + +
Sbjct: 5603 DMSVSLGNVIDLECKVTGLPNPSVKWSK-------DGGPLI--EDSRFEWSNEASKGVYQ 5653
Query: 144 LQIKYVQKRDNGTYECQVSTCQLSGTTE 171
L+IK D GTY C + S TT+
Sbjct: 5654 LRIKNATVHDEGTYRCVATNENGSATTK 5681
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 33.5 bits (73), Expect = 0.11
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 9/88 (10%)
Query: 84 DVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLHSEGSDDWI 143
D+ LG V L C V L V W + G L+ D RF+ + +
Sbjct: 4963 DMSVSLGNVIDLECKVTGLPNPSVKWSK-------DGGPLI--EDSRFEWSNEASKGVYQ 5013
Query: 144 LQIKYVQKRDNGTYECQVSTCQLSGTTE 171
L+IK D GTY C + S TT+
Sbjct: 5014 LRIKNATVHDEGTYRCVATNENGSATTK 5041
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 33.5 bits (73), Expect = 0.11
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 9/88 (10%)
Query: 84 DVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLHSEGSDDWI 143
D+ LG V L C V L V W + G L+ D RF+ + +
Sbjct: 5603 DMSVSLGNVIDLECKVTGLPNPSVKWSK-------DGGPLI--EDSRFEWSNEASKGVYQ 5653
Query: 144 LQIKYVQKRDNGTYECQVSTCQLSGTTE 171
L+IK D GTY C + S TT+
Sbjct: 5654 LRIKNATVHDEGTYRCVATNENGSATTK 5681
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 33.5 bits (73), Expect = 0.11
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 9/88 (10%)
Query: 84 DVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLHSEGSDDWI 143
D+ LG V L C V L V W + G L+ D RF+ + +
Sbjct: 5603 DMSVSLGNVIDLECKVTGLPNPSVKWSK-------DGGPLI--EDSRFEWSNEASKGVYQ 5653
Query: 144 LQIKYVQKRDNGTYECQVSTCQLSGTTE 171
L+IK D GTY C + S TT+
Sbjct: 5654 LRIKNATVHDEGTYRCVATNENGSATTK 5681
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 33.5 bits (73), Expect = 0.11
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 9/88 (10%)
Query: 84 DVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLHSEGSDDWI 143
D+ LG V L C V L V W + G L+ D RF+ + +
Sbjct: 4963 DMSVSLGNVIDLECKVTGLPNPSVKWSK-------DGGPLI--EDSRFEWSNEASKGVYQ 5013
Query: 144 LQIKYVQKRDNGTYECQVSTCQLSGTTE 171
L+IK D GTY C + S TT+
Sbjct: 5014 LRIKNATVHDEGTYRCVATNENGSATTK 5041
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 33.5 bits (73), Expect = 0.11
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 9/88 (10%)
Query: 84 DVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLHSEGSDDWI 143
D+ LG V L C V L V W + G L+ D RF+ + +
Sbjct: 5603 DMSVSLGNVIDLECKVTGLPNPSVKWSK-------DGGPLI--EDSRFEWSNEASKGVYQ 5653
Query: 144 LQIKYVQKRDNGTYECQVSTCQLSGTTE 171
L+IK D GTY C + S TT+
Sbjct: 5654 LRIKNATVHDEGTYRCVATNENGSATTK 5681
>U40942-9|AAC47074.6| 703|Caenorhabditis elegans Synaptogenesis
abnormal protein 1 protein.
Length = 703
Score = 32.3 bits (70), Expect = 0.25
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 83 EDVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLHSEGSDDW 142
+D LA +G A L C V + + V W++ D+ + + ++R++++ S + ++
Sbjct: 30 KDTLAAVGETAILTCRVEHQ-QGPVQWMKD-DFGLGTDRDKPLPGNKRYRMVGSAANGEY 87
Query: 143 ILQIKYVQKRDNGTYECQVS 162
L+I V D+ + CQ+S
Sbjct: 88 NLEISNVTLFDDDDFACQIS 107
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 31.5 bits (68), Expect = 0.43
Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 13/105 (12%)
Query: 76 PSINNTQEDVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLH 135
P+I + ++ +G+ A L C G+SW+R G+ + D R H
Sbjct: 425 PTIEHGHQNQTLMVGSSAILPCQASGKPTPGISWLR--------DGLPIDITDSRIS-QH 475
Query: 136 SEGSDDWILQIKYVQKRDNGTYECQVSTCQLSGTTEPSPTVPAST 180
S GS L I ++K D G Y C T S TV T
Sbjct: 476 STGS----LHIADLKKPDTGVYTCIAKNEDGESTWSASLTVEDHT 516
Score = 31.1 bits (67), Expect = 0.57
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
Query: 90 GAVAFLHC-PVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLHSEGSDDWILQIKY 148
G +A L C P R E VSW R+ D + + YT LHS+G+ L I
Sbjct: 147 GEMAVLECSPPRGFPEPVVSW-RKDDKELRIQDMPRYT-------LHSDGN----LIIDP 194
Query: 149 VQKRDNGTYEC 159
V + D+GTY+C
Sbjct: 195 VDRSDSGTYQC 205
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 31.5 bits (68), Expect = 0.43
Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 13/105 (12%)
Query: 76 PSINNTQEDVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLH 135
P+I + ++ +G+ A L C G+SW+R G+ + D R H
Sbjct: 425 PTIEHGHQNQTLMVGSSAILPCQASGKPTPGISWLR--------DGLPIDITDSRIS-QH 475
Query: 136 SEGSDDWILQIKYVQKRDNGTYECQVSTCQLSGTTEPSPTVPAST 180
S GS L I ++K D G Y C T S TV T
Sbjct: 476 STGS----LHIADLKKPDTGVYTCIAKNEDGESTWSASLTVEDHT 516
Score = 31.1 bits (67), Expect = 0.57
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
Query: 90 GAVAFLHC-PVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLHSEGSDDWILQIKY 148
G +A L C P R E VSW R+ D + + YT LHS+G+ L I
Sbjct: 147 GEMAVLECSPPRGFPEPVVSW-RKDDKELRIQDMPRYT-------LHSDGN----LIIDP 194
Query: 149 VQKRDNGTYEC 159
V + D+GTY+C
Sbjct: 195 VDRSDSGTYQC 205
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 31.5 bits (68), Expect = 0.43
Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 13/105 (12%)
Query: 76 PSINNTQEDVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLH 135
P+I + ++ +G+ A L C G+SW+R G+ + D R H
Sbjct: 425 PTIEHGHQNQTLMVGSSAILPCQASGKPTPGISWLR--------DGLPIDITDSRIS-QH 475
Query: 136 SEGSDDWILQIKYVQKRDNGTYECQVSTCQLSGTTEPSPTVPAST 180
S GS L I ++K D G Y C T S TV T
Sbjct: 476 STGS----LHIADLKKPDTGVYTCIAKNEDGESTWSASLTVEDHT 516
Score = 31.1 bits (67), Expect = 0.57
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
Query: 90 GAVAFLHC-PVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLHSEGSDDWILQIKY 148
G +A L C P R E VSW R+ D + + YT LHS+G+ L I
Sbjct: 147 GEMAVLECSPPRGFPEPVVSW-RKDDKELRIQDMPRYT-------LHSDGN----LIIDP 194
Query: 149 VQKRDNGTYEC 159
V + D+GTY+C
Sbjct: 195 VDRSDSGTYQC 205
>Z48582-7|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/35 (31%), Positives = 23/35 (65%)
Query: 148 YVQKRDNGTYECQVSTCQLSGTTEPSPTVPASTMT 182
Y+Q+ + T E + ST ++ +T +P+ P+ST++
Sbjct: 651 YIQEYSSTTIESESSTSAVASSTSSTPSTPSSTLS 685
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/35 (31%), Positives = 23/35 (65%)
Query: 148 YVQKRDNGTYECQVSTCQLSGTTEPSPTVPASTMT 182
Y+Q+ + T E + ST ++ +T +P+ P+ST++
Sbjct: 651 YIQEYSSTTIESESSTSAVASSTSSTPSTPSSTLS 685
>AL110487-17|CAH10818.1| 304|Caenorhabditis elegans Hypothetical
protein Y39E4B.3c protein.
Length = 304
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 154 NGTYECQVSTCQLSGTTEPSPTVPASTMTCNRQPAG 189
NG ++C + QL+ + T P +T T P G
Sbjct: 183 NGEFQCSIPLSQLTAQQSTTTTTPTTTSTTTASPDG 218
>AL110487-16|CAH10817.1| 307|Caenorhabditis elegans Hypothetical
protein Y39E4B.3b protein.
Length = 307
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 154 NGTYECQVSTCQLSGTTEPSPTVPASTMTCNRQPAG 189
NG ++C + QL+ + T P +T T P G
Sbjct: 183 NGEFQCSIPLSQLTAQQSTTTTTPTTTSTTTASPDG 218
>AL110487-15|CAB54432.1| 395|Caenorhabditis elegans Hypothetical
protein Y39E4B.3a protein.
Length = 395
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 154 NGTYECQVSTCQLSGTTEPSPTVPASTMTCNRQPAG 189
NG ++C + QL+ + T P +T T P G
Sbjct: 183 NGEFQCSIPLSQLTAQQSTTTTTPTTTSTTTASPDG 218
>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
protein.
Length = 2693
Score = 28.7 bits (61), Expect = 3.0
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 76 PSINNTQEDVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLH 135
P++ + AQ G L C + + E V+W + D I S+G R++ L
Sbjct: 1517 PTLQKALNNESAQAGQQIMLTCRISSRSESTVAWF-KDDERIESAG--------RYE-LS 1566
Query: 136 SEGSDDWILQIKYVQKRDNGTYECQVS 162
S+ + L VQ +D G Y C V+
Sbjct: 1567 SDKKSNHKLVCHAVQSQDTGKYRCVVT 1593
>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
protein.
Length = 2708
Score = 28.7 bits (61), Expect = 3.0
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 76 PSINNTQEDVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLH 135
P++ + AQ G L C + + E V+W + D I S+G R++ L
Sbjct: 1532 PTLQKALNNESAQAGQQIMLTCRISSRSESTVAWF-KDDERIESAG--------RYE-LS 1581
Query: 136 SEGSDDWILQIKYVQKRDNGTYECQVS 162
S+ + L VQ +D G Y C V+
Sbjct: 1582 SDKKSNHKLVCHAVQSQDTGKYRCVVT 1608
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 3.0
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 76 PSINNTQEDVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLH 135
P++ + AQ G L C + + E V+W + D I S+G R++ L
Sbjct: 17343 PTLQKALNNESAQAGQQIMLTCRISSRSESTVAWF-KDDERIESAG--------RYE-LS 17392
Query: 136 SEGSDDWILQIKYVQKRDNGTYECQVS 162
S+ + L VQ +D G Y C V+
Sbjct: 17393 SDKKSNHKLVCHAVQSQDTGKYRCVVT 17419
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 3.0
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 76 PSINNTQEDVLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLH 135
P++ + AQ G L C + + E V+W + D I S+G R++ L
Sbjct: 17358 PTLQKALNNESAQAGQQIMLTCRISSRSESTVAWF-KDDERIESAG--------RYE-LS 17407
Query: 136 SEGSDDWILQIKYVQKRDNGTYECQVS 162
S+ + L VQ +D G Y C V+
Sbjct: 17408 SDKKSNHKLVCHAVQSQDTGKYRCVVT 17434
>Z48178-5|CAA88205.1| 413|Caenorhabditis elegans Hypothetical
protein C05C10.4 protein.
Length = 413
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 126 TNDERFQVLHSEGSDDWILQIKYVQKRDNGTYECQVSTCQ-LSGTTEPSPTV 176
TN+ F+VL+ EG D I + NG C + Q L+ T +P P +
Sbjct: 354 TNERFFKVLYREGDDTPISDVTSQLPICNGATLCPLGALQTLAETLKPLPDI 405
>Z34533-8|CAA84297.2| 616|Caenorhabditis elegans Hypothetical
protein B0285.5 protein.
Length = 616
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 114 DWHIISSGVLMYTNDERFQVLHSEGSDDWILQIKYVQKRDNG 155
D H+IS Y + F VL DD ++ I YV NG
Sbjct: 253 DLHVISFDWKPYEANSSFTVLAKMKQDDLLVLINYVYSEGNG 294
>AY552607-1|AAS89254.1| 616|Caenorhabditis elegans heparan sulfate
C5-glucuronyl epimeraseprotein.
Length = 616
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 114 DWHIISSGVLMYTNDERFQVLHSEGSDDWILQIKYVQKRDNG 155
D H+IS Y + F VL DD ++ I YV NG
Sbjct: 253 DLHVISFDWKPYEANSSFTVLAKMKQDDLLVLINYVYSEGNG 294
>Z69664-7|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical
protein K04D7.4 protein.
Length = 1159
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 125 YTNDERFQVLHSEGSDDWILQIKYVQKRDNGTYECQVSTCQLSGTTEPSPTVPASTMTCN 184
+ +D R+Q++ + L++ V D+GTY C++ T L + + + T + M
Sbjct: 85 WVSDGRYQLIRPF----YTLRVSPVTPEDSGTYRCRLETDPLFSSPQSTATQELAVMVKP 140
Query: 185 RQPAGHAMGWLYNTIVNL 202
P+ + N + L
Sbjct: 141 VAPSSPEIKTFTNRSITL 158
>U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1,
isoform c protein.
Length = 942
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 142 WILQIKYVQKRDNGTYECQVS 162
W L+IK Q D+G+Y C+V+
Sbjct: 238 WELEIKNAQTSDSGSYMCRVT 258
>U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1,
isoform a protein.
Length = 1409
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 142 WILQIKYVQKRDNGTYECQVS 162
W L+IK Q D+G+Y C+V+
Sbjct: 238 WELEIKNAQTSDSGSYMCRVT 258
>U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1,
isoform b protein.
Length = 1444
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 142 WILQIKYVQKRDNGTYECQVS 162
W L+IK Q D+G+Y C+V+
Sbjct: 238 WELEIKNAQTSDSGSYMCRVT 258
>AF047881-1|AAC27552.1| 942|Caenorhabditis elegans truncated CLR-1
protein.
Length = 942
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 142 WILQIKYVQKRDNGTYECQVS 162
W L+IK Q D+G+Y C+V+
Sbjct: 238 WELEIKNAQTSDSGSYMCRVT 258
>AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein.
Length = 1409
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 142 WILQIKYVQKRDNGTYECQVS 162
W L+IK Q D+G+Y C+V+
Sbjct: 238 WELEIKNAQTSDSGSYMCRVT 258
>Z47808-9|CAI46561.1| 425|Caenorhabditis elegans Hypothetical
protein D2013.8b protein.
Length = 425
Score = 27.1 bits (57), Expect = 9.3
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 115 WHIISSGVLMYTNDERFQ-VLHSEGSDDWILQIK-----YVQKRDNGTYECQVSTCQLSG 168
W +++G L+ TND + S D++L Y+ +NG C+VS G
Sbjct: 286 WWNLNTGELIRTNDNNYTWAFQLATSSDYLLGFYGSSQLYMWNVENGQLACRVSDALGDG 345
Query: 169 TTE 171
T+E
Sbjct: 346 TSE 348
>Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical protein
D2013.8a protein.
Length = 1087
Score = 27.1 bits (57), Expect = 9.3
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 115 WHIISSGVLMYTNDERFQ-VLHSEGSDDWILQIK-----YVQKRDNGTYECQVSTCQLSG 168
W +++G L+ TND + S D++L Y+ +NG C+VS G
Sbjct: 948 WWNLNTGELIRTNDNNYTWAFQLATSSDYLLGFYGSSQLYMWNVENGQLACRVSDALGDG 1007
Query: 169 TTE 171
T+E
Sbjct: 1008 TSE 1010
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.131 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,350,635
Number of Sequences: 27539
Number of extensions: 177180
Number of successful extensions: 639
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 510
Number of HSP's gapped (non-prelim): 130
length of query: 202
length of database: 12,573,161
effective HSP length: 78
effective length of query: 124
effective length of database: 10,425,119
effective search space: 1292714756
effective search space used: 1292714756
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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