Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000193-TA|BGIBMGA000193-PA|IPR013106|Immunoglobulin
V-set, IPR007110|Immunoglobulin-like, IPR003599|Immunoglobulin subtype
(202 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 27 0.093
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 25 0.66
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 0.66
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 24 0.87
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 3.5
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 4.6
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 6.1
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 27.5 bits (58), Expect = 0.093
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 138 GSDDWILQIKYVQKRDNGTYECQVSTCQLS 167
G ++ +L+I+ V+K D G Y+C V Q S
Sbjct: 349 GLEEAVLRIESVKKEDKGMYQCFVRNDQES 378
Score = 21.4 bits (43), Expect = 6.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 140 DDWILQIKYVQKRDNGTYECQ 160
+D L I +QK + G Y C+
Sbjct: 736 EDGTLSINNIQKTNEGYYLCE 756
Score = 21.0 bits (42), Expect = 8.1
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
Query: 121 GVLMYTNDERFQVLHSEGSDDWILQIKYVQKRDNGTYECQV 161
G ++ ++D Q+ EGS L IK V + D G Y C V
Sbjct: 1314 GAVLQSSDRLRQL--PEGS----LFIKEVDRTDAGEYSCYV 1348
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 24.6 bits (51), Expect = 0.66
Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 8/80 (10%)
Query: 85 VLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLHSEGSDDWI- 143
V + G A LHC V V+W++ + S TN R V D I
Sbjct: 817 VTVKKGDTATLHCEVHGDTPVTVTWLKGGKIELNPS-----TN-YRVTVKREVTPDGVIA 870
Query: 144 -LQIKYVQKRDNGTYECQVS 162
LQI + D+G Y CQ S
Sbjct: 871 QLQISSAEASDSGAYFCQAS 890
Score = 24.6 bits (51), Expect = 0.66
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 144 LQIKYVQKRDNGTYECQVSTCQ 165
L + +Q +D G Y CQV Q
Sbjct: 1369 LMLSNLQSQDGGDYTCQVENAQ 1390
Score = 22.2 bits (45), Expect = 3.5
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 143 ILQIKYVQKRDNGTYECQVS 162
+L ++ V DNG Y C S
Sbjct: 294 VLALEAVTLEDNGIYRCSAS 313
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 134 LHSEGSDDWILQIKYVQKRDNGTYECQV 161
L G +L++ + + D G Y+C V
Sbjct: 374 LPGTGRQSELLRLNGINREDRGMYQCIV 401
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.6 bits (51), Expect = 0.66
Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 8/80 (10%)
Query: 85 VLAQLGAVAFLHCPVRNLGERGVSWVRRRDWHIISSGVLMYTNDERFQVLHSEGSDDWI- 143
V + G A LHC V V+W++ + S TN R V D I
Sbjct: 813 VTVKKGDTATLHCEVHGDTPVTVTWLKGGKIELNPS-----TN-YRVTVKREVTPDGVIA 866
Query: 144 -LQIKYVQKRDNGTYECQVS 162
LQI + D+G Y CQ S
Sbjct: 867 QLQISSAEASDSGAYFCQAS 886
Score = 24.6 bits (51), Expect = 0.66
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 144 LQIKYVQKRDNGTYECQVSTCQ 165
L + +Q +D G Y CQV Q
Sbjct: 1365 LMLSNLQSQDGGDYTCQVENAQ 1386
Score = 22.2 bits (45), Expect = 3.5
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 143 ILQIKYVQKRDNGTYECQVS 162
+L ++ V DNG Y C S
Sbjct: 294 VLALEAVTLEDNGIYRCSAS 313
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 134 LHSEGSDDWILQIKYVQKRDNGTYECQV 161
L G +L++ + + D G Y+C V
Sbjct: 374 LPGTGRQSELLRLNGINREDRGMYQCIV 401
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 24.2 bits (50), Expect = 0.87
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 162 STCQLSGTTEPSPTVPASTMTCN 184
S +SGTT P ++PAS+ + N
Sbjct: 845 SVISMSGTTVPITSLPASSTSIN 867
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.2 bits (45), Expect = 3.5
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 144 LQIKYVQKRDNGTYECQVST 163
L IK V D G Y CQ S+
Sbjct: 459 LIIKNVDYADTGAYMCQASS 478
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.8 bits (44), Expect = 4.6
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 67 GSLDALHREPSINNTQEDVLAQLGAVA 93
G+L + + PS+ +T+E V QL ++
Sbjct: 496 GTLGIIFQAPSLYDTREPVDQQLSGIS 522
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.4 bits (43), Expect = 6.1
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 139 SDDWILQIKYVQKRDNGTYE 158
+DDW + Y K+D ++
Sbjct: 2 ADDWGKTVSYTNKKDESYFD 21
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.318 0.131 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,083
Number of Sequences: 429
Number of extensions: 2291
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 15
length of query: 202
length of database: 140,377
effective HSP length: 55
effective length of query: 147
effective length of database: 116,782
effective search space: 17166954
effective search space used: 17166954
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)
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