Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000192-TA|BGIBMGA000192-PA|undefined
         (176 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC094880-1|AAH94880.1|  818|Homo sapiens zinc finger protein 160...    31   2.9  
AK024442-1|BAB15732.1|  705|Homo sapiens FLJ00032 protein protein.     31   2.9  
AF277623-1|AAK61306.1|  556|Homo sapiens KRAB zinc finger protei...    31   2.9  
AB046831-1|BAB13437.1|  813|Homo sapiens KIAA1611 protein protein.     31   2.9  

>BC094880-1|AAH94880.1|  818|Homo sapiens zinc finger protein 160
           protein.
          Length = 818

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 117 ELNFREGRRLFHPFAAPVLKDTAQYPGRCETKEQARADKNDRADV 161
           + +F+E ++  H F      DT  Y G    +++ + D+ DR D+
Sbjct: 128 DFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDRRDI 172


>AK024442-1|BAB15732.1|  705|Homo sapiens FLJ00032 protein protein.
          Length = 705

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 117 ELNFREGRRLFHPFAAPVLKDTAQYPGRCETKEQARADKNDRADV 161
           + +F+E ++  H F      DT  Y G    +++ + D+ DR D+
Sbjct: 15  DFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDRRDI 59


>AF277623-1|AAK61306.1|  556|Homo sapiens KRAB zinc finger protein
           protein.
          Length = 556

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 117 ELNFREGRRLFHPFAAPVLKDTAQYPGRCETKEQARADKNDRADV 161
           + +F+E ++  H F      DT  Y G    +++ + D+ DR D+
Sbjct: 128 DFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDRRDI 172


>AB046831-1|BAB13437.1|  813|Homo sapiens KIAA1611 protein protein.
          Length = 813

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 117 ELNFREGRRLFHPFAAPVLKDTAQYPGRCETKEQARADKNDRADV 161
           + +F+E ++  H F      DT  Y G    +++ + D+ DR D+
Sbjct: 123 DFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDRRDI 167


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.322    0.134    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,749,673
Number of Sequences: 224733
Number of extensions: 1011442
Number of successful extensions: 1642
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1638
Number of HSP's gapped (non-prelim): 4
length of query: 176
length of database: 73,234,838
effective HSP length: 85
effective length of query: 91
effective length of database: 54,132,533
effective search space: 4926060503
effective search space used: 4926060503
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)