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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000189-TA|BGIBMGA000189-PA|IPR000357|HEAT
         (680 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g01690.1 68415.m00096 expressed protein                            390   e-108
At2g01690.2 68415.m00097 expressed protein                            386   e-107
At1g59850.1 68414.m06741 expressed protein                             36   0.088
At1g27210.1 68414.m03314 expressed protein                             35   0.20 
At1g77460.1 68414.m09020 C2 domain-containing protein / armadill...    33   0.47 
At5g64270.1 68418.m08074 splicing factor, putative similar to sp...    33   0.82 
At3g54280.1 68416.m05999 SNF2 domain-containing protein / helica...    32   1.4  
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID...    31   3.3  
At5g24100.1 68418.m02830 leucine-rich repeat transmembrane prote...    30   4.4  
At2g20190.1 68415.m02361 CLIP-associating protein (CLASP) -relat...    30   4.4  
At2g16950.1 68415.m01953 importin beta-2 subunit family protein ...    30   4.4  
At1g64790.1 68414.m07346 translational activator family protein ...    30   4.4  
At3g26500.1 68416.m03305 leucine-rich repeat family protein            29   7.7  
At1g27760.2 68414.m03394 interferon-related developmental regula...    29   7.7  
At1g27760.1 68414.m03392 interferon-related developmental regula...    29   7.7  

>At2g01690.1 68415.m00096 expressed protein
          Length = 743

 Score =  390 bits (960), Expect = e-108
 Identities = 236/622 (37%), Positives = 344/622 (55%), Gaps = 41/622 (6%)

Query: 15  RGLCDKLYEKRKVAGVEIEKMVKDFNDAKNTSQIKKLIKVLGQDLMSSTNPNMKNGALMG 74
           R L DKLYEKRK A +E+E +VK+   + +  +I K+I++L ++   S   N + G L+G
Sbjct: 14  RNLSDKLYEKRKNAALELENIVKNLTSSGDHDKISKVIEMLIKEFAKSPQANHRKGGLIG 73

Query: 75  LSTVAVGLGKASVDYLPELTNPIVACFSESESRVRYQAAEALFN------------FPVI 122
           L+ V VGL   +  YL ++  P++  FS+ +SRVRY A EAL+N            F  I
Sbjct: 74  LAAVTVGLSTEAAQYLEQIVPPVINSFSDQDSRVRYYACEALYNIAKVVRGDFIIFFNKI 133

Query: 123 FDALAKLAADPEQQVKHAAELLDRLLKDIVTXXXXXXXXXXXXXXRERMYTRSAPARQLA 182
           FDAL KL+AD +  V+ AA LLDRL+KDIVT              +ERM   +   RQ  
Sbjct: 134 FDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLKERMNVLNPYVRQFL 193

Query: 183 VSWVAVLDAVPDLNVLAHLPDLLDGLFKMLDDPNPEIRRMCDVQLNEFLRSIKKEPAKVD 242
           V W+ VLD+VPD+++L  LPD LDGLF ML D + EIR+  D  L+EFL+ IK  P+ VD
Sbjct: 194 VGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPS-VD 252

Query: 243 FQAMINILIIHAQSPEELLQLTAITWLKEFVELAGAAMLPFASGILCAVLPCHAYSDEPR 302
           +  M  IL+  A SP+E  +LTAITW+ EFV+L G  ++ + + IL A+LPC   SD+  
Sbjct: 253 YGRMAEILVQRAASPDEFTRLTAITWINEFVKLGGDQLVRYYADILGAILPC--ISDKEE 310

Query: 303 KKRTGIRETAATVNFQLIKXXXXXXXXXXXXXXXXXXXXXXXXXXVVGVLTQMLHHSSVH 362
           K R   RET    N +L                            ++ V  + L      
Sbjct: 311 KIRVVARET----NEEL-------------RSIHVEPSDGFDVGAILSVARRQLSSEFEA 353

Query: 363 TKVAALDWILHLYNKLPKQMCGETERVWAGAVGSLTDAAHDVLRRALAVLAEICSAAGDL 422
           T++ AL+WI  L NK   ++      ++   + +L+D++ DV+   L V       AG  
Sbjct: 354 TRIEALNWISTLLNKHRTEVLCFLNDIFDTLLKALSDSSDDVVLLVLEV------HAGVA 407

Query: 423 QSSPYYYKFLQAXXXXXXXXXXXXXXXGAFIIRQLCVLLNAEDIYRALANILQQEKNLRF 482
           +   ++ + +                 GA I+R++CVLL+AE +YR L+ IL+ E NL F
Sbjct: 408 KDPQHFRQLIVFLVHNFRADNSLLERRGALIVRRMCVLLDAERVYRELSTILEGEDNLDF 467

Query: 483 VTTMVDILNTILLTSAELYELRALLK-DRSKPWSRSLFLALHGCWCHSPVSLLALCLLAH 541
            +TMV  LN ILLTS EL +LR LLK        + LF+AL+  WCHSP+++++LCLLA 
Sbjct: 468 ASTMVQALNLILLTSPELSKLRELLKGSLVNREGKELFVALYTSWCHSPMAIISLCLLAQ 527

Query: 542 HYRHCNTLIATFGDLEITVEFLTEVDKLVQLIESPIFAYLRLELV--GEHSXXXXXXXXX 599
            Y+H + +I +  + +I V+FL ++DKL++L+E+PIF YLRL+L+  G ++         
Sbjct: 528 AYQHASVVIQSLVEEDINVKFLVQLDKLIRLLETPIFTYLRLQLLEPGRYTWLLKTLYGL 587

Query: 600 XXXXXPQSDAFHALRARLHCLP 621
                 QS AF  LR RL  +P
Sbjct: 588 LMLLPQQSAAFKILRTRLKTVP 609


>At2g01690.2 68415.m00097 expressed protein
          Length = 744

 Score =  386 bits (949), Expect = e-107
 Identities = 236/623 (37%), Positives = 344/623 (55%), Gaps = 42/623 (6%)

Query: 15  RGLCDKLYEKRKVAGVEIEKMVKDFNDAKNTSQIKKLIKVLGQDLMSSTNPNMKNGALMG 74
           R L DKLYEKRK A +E+E +VK+   + +  +I K+I++L ++   S   N + G L+G
Sbjct: 14  RNLSDKLYEKRKNAALELENIVKNLTSSGDHDKISKVIEMLIKEFAKSPQANHRKGGLIG 73

Query: 75  LSTVAVGLGKASVDYLPELTNPIVACFSESESRVRYQAAEALFN------------FPVI 122
           L+ V VGL   +  YL ++  P++  FS+ +SRVRY A EAL+N            F  I
Sbjct: 74  LAAVTVGLSTEAAQYLEQIVPPVINSFSDQDSRVRYYACEALYNIAKVVRGDFIIFFNKI 133

Query: 123 FDALAKLAADPEQQVKHAAELLDRLLK-DIVTXXXXXXXXXXXXXXRERMYTRSAPARQL 181
           FDAL KL+AD +  V+ AA LLDRL+K DIVT              +ERM   +   RQ 
Sbjct: 134 FDALCKLSADSDANVQSAAHLLDRLVKQDIVTESDQFSIEEFIPLLKERMNVLNPYVRQF 193

Query: 182 AVSWVAVLDAVPDLNVLAHLPDLLDGLFKMLDDPNPEIRRMCDVQLNEFLRSIKKEPAKV 241
            V W+ VLD+VPD+++L  LPD LDGLF ML D + EIR+  D  L+EFL+ IK  P+ V
Sbjct: 194 LVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPS-V 252

Query: 242 DFQAMINILIIHAQSPEELLQLTAITWLKEFVELAGAAMLPFASGILCAVLPCHAYSDEP 301
           D+  M  IL+  A SP+E  +LTAITW+ EFV+L G  ++ + + IL A+LPC   SD+ 
Sbjct: 253 DYGRMAEILVQRAASPDEFTRLTAITWINEFVKLGGDQLVRYYADILGAILPC--ISDKE 310

Query: 302 RKKRTGIRETAATVNFQLIKXXXXXXXXXXXXXXXXXXXXXXXXXXVVGVLTQMLHHSSV 361
            K R   RET    N +L                            ++ V  + L     
Sbjct: 311 EKIRVVARET----NEEL-------------RSIHVEPSDGFDVGAILSVARRQLSSEFE 353

Query: 362 HTKVAALDWILHLYNKLPKQMCGETERVWAGAVGSLTDAAHDVLRRALAVLAEICSAAGD 421
            T++ AL+WI  L NK   ++      ++   + +L+D++ DV+   L V       AG 
Sbjct: 354 ATRIEALNWISTLLNKHRTEVLCFLNDIFDTLLKALSDSSDDVVLLVLEV------HAGV 407

Query: 422 LQSSPYYYKFLQAXXXXXXXXXXXXXXXGAFIIRQLCVLLNAEDIYRALANILQQEKNLR 481
            +   ++ + +                 GA I+R++CVLL+AE +YR L+ IL+ E NL 
Sbjct: 408 AKDPQHFRQLIVFLVHNFRADNSLLERRGALIVRRMCVLLDAERVYRELSTILEGEDNLD 467

Query: 482 FVTTMVDILNTILLTSAELYELRALLK-DRSKPWSRSLFLALHGCWCHSPVSLLALCLLA 540
           F +TMV  LN ILLTS EL +LR LLK        + LF+AL+  WCHSP+++++LCLLA
Sbjct: 468 FASTMVQALNLILLTSPELSKLRELLKGSLVNREGKELFVALYTSWCHSPMAIISLCLLA 527

Query: 541 HHYRHCNTLIATFGDLEITVEFLTEVDKLVQLIESPIFAYLRLELV--GEHSXXXXXXXX 598
             Y+H + +I +  + +I V+FL ++DKL++L+E+PIF YLRL+L+  G ++        
Sbjct: 528 QAYQHASVVIQSLVEEDINVKFLVQLDKLIRLLETPIFTYLRLQLLEPGRYTWLLKTLYG 587

Query: 599 XXXXXXPQSDAFHALRARLHCLP 621
                  QS AF  LR RL  +P
Sbjct: 588 LLMLLPQQSAAFKILRTRLKTVP 610


>At1g59850.1 68414.m06741 expressed protein
          Length = 498

 Score = 35.9 bits (79), Expect = 0.088
 Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 3/101 (2%)

Query: 176 APARQLAVSWVAVLDAVPDLNVLAHLPDLLDGLFKMLDDPNPEIRRMCDVQLNEFLRSIK 235
           +P R+  VS ++VL      ++  HL  ++  + + L DP+  +R  C     +   +I 
Sbjct: 74  SPVRKHCVSLLSVLSRSHGDSLAPHLSKMVSTVLRRLRDPDSSVRAACVAASVDMTTNIT 133

Query: 236 KEPAKVDFQAMINILIIHAQSPEELLQLTAITWLKEFVELA 276
            +P  + F  MI   +IH   P    Q++A   L   V+ A
Sbjct: 134 GQPFSILFGPMIE-TVIHDCDPN--AQISAAMCLAAAVDAA 171


>At1g27210.1 68414.m03314 expressed protein
          Length = 625

 Score = 34.7 bits (76), Expect = 0.20
 Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 3/101 (2%)

Query: 176 APARQLAVSWVAVLDAVPDLNVLAHLPDLLDGLFKMLDDPNPEIRRMCDVQLNEFLRSIK 235
           +P R+  V+ ++VL      ++  HL  ++  + + L DP+  +R  C V   +    + 
Sbjct: 87  SPVRKQCVALLSVLSRYHGDSLTPHLAKMVSTVIRRLRDPDSSVRSACAVATADMSAHVT 146

Query: 236 KEPAKVDFQAMINILIIHAQSPEELLQLTAITWLKEFVELA 276
           ++P     + +I  LI   Q  +  LQ+ A   L   V+ A
Sbjct: 147 RQPFASVAKPLIETLI---QEGDSNLQIGAALCLAASVDAA 184


>At1g77460.1 68414.m09020 C2 domain-containing protein /
           armadillo/beta-catenin repeat family protein similar to
           CCLS 65 [Silene latifolia] GI:2570102; contains Pfam
           profiles PF00514: Armadillo/beta-catenin-like repeat,
           PF00168: C2 domain
          Length = 2110

 Score = 33.5 bits (73), Expect = 0.47
 Identities = 42/192 (21%), Positives = 82/192 (42%), Gaps = 6/192 (3%)

Query: 45  TSQIKKLIKVLGQDLMSSTNPNMKN---GALMGLSTVAVGLGKASVDYLPELTNPIVACF 101
           TS+I+ +I+VLG  L  ++  ++ +    A  GL ++   L  +  +      + +   F
Sbjct: 578 TSKIQ-VIEVLGHVLSKASQEDLVHRGCAANKGLRSLVESLTSSREETKEHTASVLADLF 636

Query: 102 SESESRVRYQAAEALFNFPVIFDALAKLAADPEQQVKHAAELLDRLLKDIVTXXXXXXXX 161
           S  +    + A + + N P I   L     +  +QV  A + L R +K+           
Sbjct: 637 SSRQDICGHLATDDIIN-PWI-KLLTNNTQNVAKQVARALDALSRPVKNNNNKKKSYIAE 694

Query: 162 XXXXXXRERMYTRSAPARQLAVSWVAVLDAVPDLNVLAHLPDLLDGLFKMLDDPNPEIRR 221
                  +     S  + + AVS +A L + PD+   A   D++    ++L D +PE +R
Sbjct: 695 GDIKSLIKLAKNSSIESAENAVSALANLLSDPDIAAEALAEDVVSAFTRILADGSPEGKR 754

Query: 222 MCDVQLNEFLRS 233
                L++ L++
Sbjct: 755 NASRALHQLLKN 766


>At5g64270.1 68418.m08074 splicing factor, putative similar to
           splicing factor 3B subunit 1 (Spliceosome associated
           protein 155) (SAP 155) (SF3b155) (Pre-mRNA splicing
           factor SF3b 155 kDa subunit) (146 kDa nuclear protein)
           SP:O57683 from [Xenopus laevis]
          Length = 1269

 Score = 32.7 bits (71), Expect = 0.82
 Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 2/110 (1%)

Query: 14  VRGLCDKLYEKRKVAGVEIEKMVKDFNDAKNTSQIKKL-IKVLGQDLMSSTNPNMKNGAL 72
           V  L D+  + R++    I+K+V +   +   +++++L I  +       T+ +  N  L
Sbjct: 818 VEDLKDESEQYRRMVMETIDKVVTNLGASDIDARLEELLIDGILYAFQEQTSDDA-NVML 876

Query: 73  MGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRYQAAEALFNFPVI 122
            G   V   LG+    YLP++   I    +   ++VR QAA+ +    V+
Sbjct: 877 NGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVV 926


>At3g54280.1 68416.m05999 SNF2 domain-containing protein / helicase
            domain-containing protein similar to SP|O14981
            TBP-associated factor 172 (TAF-172) (TAF(II)170) {Homo
            sapiens}; contains PFam profiles PF00271: Helicase
            conserved C-terminal domain, PF00176: SNF2 family
            N-terminal domain
          Length = 2049

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 68   KNGALMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVR 109
            + GA M +  +  GLG   V Y P L  P++ C S+ +S VR
Sbjct: 1341 RQGAGMLIGLLVQGLGVELVPYSPLLVVPLLRCMSDVDSSVR 1382


>At1g67120.1 68414.m07636 midasin-related similar to Midasin
            (MIDAS-containing protein) (Swiss-Prot:Q12019)
            [Saccharomyces cerevisiae]; similar to Midasin
            (MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
            sapiens]; contains Prosite PS00017: ATP/GTP-binding site
            motif A (P-loop)
          Length = 5336

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 3/69 (4%)

Query: 457  LCVL--LNAEDIYRALANILQQEKNLRFVTTMVDILNTILLTSAELYELRALLKDRSKPW 514
            LC L  L  E  +    +I +  KNL+F+  +      I + S++L ++ A   D+SKP+
Sbjct: 2579 LCFLNTLKVEFEHPIWNHISRCRKNLKFLCRLDPDAVPIPMLSSKLIDVAAS-NDQSKPY 2637

Query: 515  SRSLFLALH 523
            S+SLF +L+
Sbjct: 2638 SKSLFESLN 2646


>At5g24100.1 68418.m02830 leucine-rich repeat transmembrane protein
           kinase, putative 
          Length = 614

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 81  GLGKASVDYLPELTNPIVACFSESESRVRYQAAE 114
           G G  S   LP LTNP+V   S + S +RY+A E
Sbjct: 477 GYGCISEAGLPLLTNPVVRADSSARSVLRYRAPE 510


>At2g20190.1 68415.m02361 CLIP-associating protein (CLASP) -related
           similar to CLIP-associating protein CLASP2 (GI:13508651)
           [Rattus norvegicus]
          Length = 1439

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 2/94 (2%)

Query: 24  KRKVAGVE-IEKMVKDFNDAKNTSQIKKLIKVLGQDLMSSTNPNMKNGALMGLSTVAVGL 82
           K ++A VE + ++++    + + +++  L+     DL+  +N  +  GAL  L++ AV  
Sbjct: 14  KERMAAVERLHQLLEASRKSLSPAEVTSLVDSC-LDLLKDSNFRVSQGALQALASAAVLA 72

Query: 83  GKASVDYLPELTNPIVACFSESESRVRYQAAEAL 116
           G+    +L  L   +V    +S+  VR  A   L
Sbjct: 73  GEHLKLHLNALVPAVVERLGDSKQPVRDAARRLL 106


>At2g16950.1 68415.m01953 importin beta-2 subunit family protein
           similar to SP|Q92973 Importin beta-2 subunit
           (Transportin) {Homo sapiens}; contains Pfam profile
           PF03810: Importin-beta N-terminal domain
          Length = 891

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 9/130 (6%)

Query: 176 APARQLAVSWVAVLDAVPDLNVLAHLPDLLDGLFKMLDDPNPEIRRM-CD--VQLNEFLR 232
           A  R+LA+  V     +    +   L   L GLF + +DP PE+R++ C   V L E L 
Sbjct: 195 ASLRKLALGSVNQYIIIMPAALYNSLDKYLQGLFVLANDPVPEVRKLVCAAFVHLTEVLP 254

Query: 233 SIKKEPAKVDFQAMINILIIHAQSPEELLQLTAITWLKEF--VELAGAAMLPFASGILCA 290
           S  +   +   + M+ +     + P+E + L A  +   +   +L    +  F   ++  
Sbjct: 255 SSIEPHLRNVMEYMLQV----NRDPDEEVSLEACEFWSAYCDAQLPPENLKEFLPRLIPV 310

Query: 291 VLPCHAYSDE 300
           +L   AY+D+
Sbjct: 311 LLENMAYADD 320


>At1g64790.1 68414.m07346 translational activator family protein
            similar to HsGCN1 [Homo sapiens] GI:2282576
          Length = 2440

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 15/121 (12%)

Query: 1    MSERDYAPLSIACVRGLCDKL-----YEKRKVAGVEIEKMVKDFNDAKNTSQIKK--LIK 53
            +S+++ AP   A    L DKL     Y +R+ A   +  +V  F      S +KK  LI 
Sbjct: 1141 LSKQEEAP---ALFLRLLDKLMKSDKYGERRGAAFGLAGVVMGFG----ISSLKKYGLIV 1193

Query: 54   VLGQDLMSSTNPNMKNGALMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRYQAA 113
             L + L+   +   + GAL+    +   LGK    Y+ ++   ++  FS+    VR +AA
Sbjct: 1194 TLQEALIDRNSAKRREGALLAFECLCEKLGKLFEPYVIKMLPLLLVSFSDQVGAVR-EAA 1252

Query: 114  E 114
            E
Sbjct: 1253 E 1253


>At3g26500.1 68416.m03305 leucine-rich repeat family protein 
          Length = 471

 Score = 29.5 bits (63), Expect = 7.7
 Identities = 18/56 (32%), Positives = 27/56 (48%)

Query: 359 SSVHTKVAALDWILHLYNKLPKQMCGETERVWAGAVGSLTDAAHDVLRRALAVLAE 414
           S ++  V  LD +   Y K  K    E  RV++  V S+  +  +V  + LAVL E
Sbjct: 100 SEIYAGVVRLDEVHDSYEKKLKDTEEELSRVYSTEVESMLRSGEEVNEKVLAVLKE 155


>At1g27760.2 68414.m03394 interferon-related developmental regulator
           family protein / IFRD protein family contains Pfam
           PF05004: Interferon-related developmental regulator
           (IFRD); similar to IFR1 protein GI:16580630 [Gallus
           gallus]; similar to Interferon-related developmental
           regulator 1  (TPA induced sequence 7) (TIS7 protein)
           (SP:P19182) {Mus musculus}
          Length = 426

 Score = 29.5 bits (63), Expect = 7.7
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 8/84 (9%)

Query: 19  DKLYEKRKVAGVEIEKMVKDFN-DAKNTSQIKKLIKVLGQDLMSSTNPNMKNGAL----M 73
           D LYEKR+ A   +  +V  FN D +     KK   +L Q L  +   + K  +L    +
Sbjct: 43  DALYEKREQA---LATIVDAFNSDLQYEFVEKKFATLLHQCLHCTKKGSTKETSLATHVI 99

Query: 74  GLSTVAVGLGKASVDYLPELTNPI 97
           GL  + VGLG  + + L E   P+
Sbjct: 100 GLLALTVGLGDHAQEVLEESVTPL 123


>At1g27760.1 68414.m03392 interferon-related developmental regulator
           family protein / IFRD protein family contains Pfam
           PF05004: Interferon-related developmental regulator
           (IFRD); similar to IFR1 protein GI:16580630 [Gallus
           gallus]; similar to Interferon-related developmental
           regulator 1  (TPA induced sequence 7) (TIS7 protein)
           (SP:P19182) {Mus musculus}
          Length = 437

 Score = 29.5 bits (63), Expect = 7.7
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 8/84 (9%)

Query: 19  DKLYEKRKVAGVEIEKMVKDFN-DAKNTSQIKKLIKVLGQDLMSSTNPNMKNGAL----M 73
           D LYEKR+ A   +  +V  FN D +     KK   +L Q L  +   + K  +L    +
Sbjct: 54  DALYEKREQA---LATIVDAFNSDLQYEFVEKKFATLLHQCLHCTKKGSTKETSLATHVI 110

Query: 74  GLSTVAVGLGKASVDYLPELTNPI 97
           GL  + VGLG  + + L E   P+
Sbjct: 111 GLLALTVGLGDHAQEVLEESVTPL 134


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.322    0.136    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,499,672
Number of Sequences: 28952
Number of extensions: 489083
Number of successful extensions: 1280
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1248
Number of HSP's gapped (non-prelim): 30
length of query: 680
length of database: 12,070,560
effective HSP length: 86
effective length of query: 594
effective length of database: 9,580,688
effective search space: 5690928672
effective search space used: 5690928672
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 63 (29.5 bits)

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