Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000189-TA|BGIBMGA000189-PA|IPR000357|HEAT
(680 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75712-4|CAB00043.1| 694|Caenorhabditis elegans Hypothetical pr... 199 5e-51
AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical... 33 0.88
Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical pr... 31 3.5
Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical p... 31 3.5
U00048-10|AAB53823.2| 852|Caenorhabditis elegans Related to yea... 31 3.5
Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical pr... 30 6.2
Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical pr... 30 6.2
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 30 6.2
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 30 6.2
>Z75712-4|CAB00043.1| 694|Caenorhabditis elegans Hypothetical
protein K04G2.6 protein.
Length = 694
Score = 199 bits (486), Expect = 5e-51
Identities = 103/310 (33%), Positives = 176/310 (56%), Gaps = 18/310 (5%)
Query: 1 MSERDYAPLSIACVRGLCDKLYEKRKVAGVEIEKMVKDFNDAKNTSQIKKLIKVLGQDLM 60
MS+ Y P+S +R + DK YE+RK A +++EK+V+D + SQ+ K + VLG+ L+
Sbjct: 1 MSDGQYGPISAGIIRSITDKSYERRKAAALDVEKLVRDLFNNNQLSQLDKCLSVLGE-LI 59
Query: 61 SSTNPNMKNGALMGLSTVAVGLG-KASVDYLPELTNPIVACFSESESRVRYQAAEALFN- 118
+S N N + G L+G++ ++ LG K + Y +L PI+ CF +++ ++RY A E+L+N
Sbjct: 60 NSGNSNQRKGGLIGMAAASIALGNKNAPPYTAKLVEPIIPCFHDADLQIRYYACESLYNI 119
Query: 119 -----------FPVIFDALAKLAADPEQQVKHAAELLDRLLKDIVTXXXXXXXXXXXXXX 167
F IFD L ++ AD +Q V+ AELL+RL+ +IV
Sbjct: 120 AKICKTSVLAHFEDIFDVLWRVTADSDQNVRGGAELLNRLITEIVLSEQEFDIAILMSLI 179
Query: 168 RERMYTRSAPARQLAVSWVAVLDAVPDLNVLAHLPDLLDGLFKMLDDPNPEIRRMCDVQL 227
R+R+YT+++ R+ + W+ +D+ P + ++ ++ DGLFKML + P +R +C+ L
Sbjct: 180 RDRIYTQTSSNRRFILEWLNTIDSAPFFSFCNYISEISDGLFKMLGEQAPAVRDLCETVL 239
Query: 228 NEFLRSIKKEPAKVDFQ---AMINILIIHAQSPEELL-QLTAITWLKEFVELAGAAMLPF 283
FL +I+ +P + + MIN+L++H E L + ++ WL+EFV+L +L
Sbjct: 240 GNFLTAIRSKPESLSLEDRIQMINVLVVHTHENEPFLARKLSLIWLEEFVKLYKTDLLVM 299
Query: 284 ASGILCAVLP 293
S L +LP
Sbjct: 300 LSTCLVGILP 309
Score = 159 bits (386), Expect = 6e-39
Identities = 106/350 (30%), Positives = 169/350 (48%), Gaps = 34/350 (9%)
Query: 349 VGVLTQMLHHSSVHTKVAALDWILHLYNKLPKQMCGETERVWAGAVGSLTDAAHDVLRRA 408
+ VL + + + V T+V L+WI HL++ +P Q+ +++ + +L+D + +VL
Sbjct: 343 IEVLLKYIKYDVVETRVTVLNWIRHLHSSMPGQLFVHMHQIFPVLLNTLSDTSDEVLLLD 402
Query: 409 LAVLAEICSAAG-----DLQS--------------SPYYYKFLQAXXXXXXXXXXXXXXX 449
L +++ IC + D+ + SP+ KF+ +
Sbjct: 403 LFLISNICQSESAPDQVDVSTFGLNETELKQVSHISPFLIKFVLSLLEMFRTEPTLLRER 462
Query: 450 GAFIIRQLCVLLNAEDIYRALANILQQEKNLRFVTTMVDILNTILLTSAELYELRALLKD 509
G IIRQLC+LL IYR + +L++E F MV L+ +LLT+ EL+ LR L+
Sbjct: 463 GVLIIRQLCLLLEPAHIYRVICVLLERESKHNFAQEMVSTLHGVLLTATELFILRDELRA 522
Query: 510 RSKPWSRSLFLALHGCWCHSPVSLLALCLLAHHYRHCNTLIATFGDLEITVEFLTEVDKL 569
S SRSLF + W + P++LL LCLL+ HY+ + ++ITV+ L E+DKL
Sbjct: 523 LSNESSRSLFECIFRVWSNRPIALLGLCLLSQHYQQAADIALLLSQVDITVDVLLEIDKL 582
Query: 570 VQLIESPIFAYLRLELVGE-HSXXXXXXXXXXXXXXPQSDAFHALRARLHCLPP----PH 624
V L+ESP+ AY+R++L+ H PQS+AF L RL +P +
Sbjct: 583 VNLVESPVLAYVRMDLLSSIHRPPLCTVLSALLMLLPQSEAFVTLHKRLQAVPALVSIDN 642
Query: 625 QPHRPRGDEREGSEAADDEPLDYGALLAQFHAVQAQHRQYRALDRSRDKL 674
P+ P+ +D+ L+ F A A+ RQ R RD L
Sbjct: 643 SPYAPK---------VPPCRIDFPPLMLHFKAALAR-RQTEVRSRHRDLL 682
>AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical
protein Y48G9A.1 protein.
Length = 1725
Score = 32.7 bits (71), Expect = 0.88
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 15 RGLCDKLYEKRKVAGVEIEKMVKDFNDAKNTSQIKKLIKVLGQDLMSSTNPNMKNGALMG 74
R L D + E R V+ + +V + + + ++I L + L+S + ++GA G
Sbjct: 724 RSLLDPVPEIRAVSARALGAVVSKSGGSTSENLRAQVIPWLKEKLVSPQSTVDRSGAAQG 783
Query: 75 LSTVAVGLGKASVDY-LPELTNPIVACFSESESRVRY 110
L V G G ++Y +PE+ + + +E+R Y
Sbjct: 784 LCEVLAGAGTEQLEYVMPEIIHATESTDVSAETRDGY 820
>Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical
protein T08A11.2 protein.
Length = 1322
Score = 30.7 bits (66), Expect = 3.5
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 72 LMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRYQAAEAL 116
L G T+ LG+ + Y+P++ I+ + ++VR QAA+ +
Sbjct: 929 LDGFGTICSSLGRRAKAYIPQICGTILWRLNNKSAKVRQQAADLI 973
>Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical
protein T08A11.2 protein.
Length = 1322
Score = 30.7 bits (66), Expect = 3.5
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 72 LMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRYQAAEAL 116
L G T+ LG+ + Y+P++ I+ + ++VR QAA+ +
Sbjct: 929 LDGFGTICSSLGRRAKAYIPQICGTILWRLNNKSAKVRQQAADLI 973
>U00048-10|AAB53823.2| 852|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 16 protein.
Length = 852
Score = 30.7 bits (66), Expect = 3.5
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 72 LMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRYQAA 113
L+ L+ V+ L KAS P+L + +V SESR Y+ A
Sbjct: 570 LLQLNDVSAALQKASASQRPQLIHQVVRHLMNSESRSSYELA 611
>Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical
protein F44G4.8 protein.
Length = 1367
Score = 29.9 bits (64), Expect = 6.2
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 494 LLTSAELYELRALLKDRSKPWSRSL 518
L TSAE +EL A+ KD PWS+ L
Sbjct: 28 LTTSAEQHELFAIKKDSLSPWSQIL 52
>Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical
protein F44G4.8 protein.
Length = 1367
Score = 29.9 bits (64), Expect = 6.2
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 494 LLTSAELYELRALLKDRSKPWSRSL 518
L TSAE +EL A+ KD PWS+ L
Sbjct: 28 LTTSAEQHELFAIKKDSLSPWSQIL 52
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 29.9 bits (64), Expect = 6.2
Identities = 12/38 (31%), Positives = 24/38 (63%)
Query: 465 DIYRALANILQQEKNLRFVTTMVDILNTILLTSAELYE 502
+I + L LQ +K++RF T+M ++N + + E++E
Sbjct: 3933 EIQKMLIEYLQLKKDVRFFTSMAGLMNKCSVLNLEMFE 3970
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 29.9 bits (64), Expect = 6.2
Identities = 12/38 (31%), Positives = 24/38 (63%)
Query: 465 DIYRALANILQQEKNLRFVTTMVDILNTILLTSAELYE 502
+I + L LQ +K++RF T+M ++N + + E++E
Sbjct: 3930 EIQKMLIEYLQLKKDVRFFTSMAGLMNKCSVLNLEMFE 3967
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.136 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,084,434
Number of Sequences: 27539
Number of extensions: 513715
Number of successful extensions: 1383
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1360
Number of HSP's gapped (non-prelim): 18
length of query: 680
length of database: 12,573,161
effective HSP length: 86
effective length of query: 594
effective length of database: 10,204,807
effective search space: 6061655358
effective search space used: 6061655358
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 63 (29.5 bits)
- SilkBase 1999-2023 -