Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000188-TA|BGIBMGA000188-PA|IPR003038|Defender against
death DAD protein
(112 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6F6.05 |||oligosaccharyltransferase epsilon subunit |Schizos... 85 3e-18
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 26 1.2
SPAC13D6.01 |pof14||F-box protein Pof14|Schizosaccharomyces pomb... 26 1.6
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 25 2.2
SPBC11B10.01 |alg2|SPBC32H8.14|mannosyltransferase complex subun... 25 2.2
SPBC16E9.14c |||membrane transporter|Schizosaccharomyces pombe|c... 25 2.8
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 25 3.8
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 25 3.8
SPBC1773.15 |||membrane transporter|Schizosaccharomyces pombe|ch... 24 6.6
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 24 6.6
SPBC1105.08 |||EMP70 family|Schizosaccharomyces pombe|chr 2|||Ma... 24 6.6
SPAC1952.16 |rga9||RhoGAp, GTPase activator towards Rho/Rac/Cdc4... 23 8.7
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 23 8.7
>SPAC6F6.05 |||oligosaccharyltransferase epsilon subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 122
Score = 84.6 bits (200), Expect = 3e-18
Identities = 47/118 (39%), Positives = 67/118 (56%), Gaps = 7/118 (5%)
Query: 2 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFIS 61
S L + + Y T LK IDA+L ++ + +QFGY LVGT+PFNSFLSGFIS
Sbjct: 5 SGLFLPLSSVITSYNENTNLSLKTIDAFLGFLVVVGGLQFGYALLVGTYPFNSFLSGFIS 64
Query: 62 TVSCFVLGVCLRLQVNPE------NKNEFQGLSA-ERGFADFIFAHLVLHIVVINFIG 112
V FV+ V R+ + + +K + +S +R F +F F+ LVLH +NF+G
Sbjct: 65 CVGQFVITVGFRMALTQQELQSSSSKKKSPVVSPYKRAFLEFCFSSLVLHFFAVNFLG 122
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 26.2 bits (55), Expect = 1.2
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 9 PKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVG 48
PK+ T L +D YL+YI ++ + Y +G
Sbjct: 557 PKILLSLLYLTDLSLFFLDTYLWYILISTIYSLAYAFCLG 596
>SPAC13D6.01 |pof14||F-box protein Pof14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 431
Score = 25.8 bits (54), Expect = 1.6
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 3 SLTAVIPK--LYQEYTTKTPKKLKIID 27
+LT PK LY Y++++PK KI+D
Sbjct: 145 NLTVASPKSNLYYRYSSESPKYAKILD 171
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 25.4 bits (53), Expect = 2.2
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 71 CLRLQVNPENKNEFQGLSAERGFADF 96
C++ QV+P+ NEF +A++ F
Sbjct: 356 CVKFQVDPDKPNEFLAGTADKRILQF 381
>SPBC11B10.01 |alg2|SPBC32H8.14|mannosyltransferase complex subunit
Alg2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 511
Score = 25.4 bits (53), Expect = 2.2
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Query: 30 LFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSC----FVLGVCL 72
L +F+ ++ +G C + T PF F T S F+LG C+
Sbjct: 448 LLAVFVLFMLFWGTCIIAATVPFAIIKLYFAQTYSSVKLGFMLGTCI 494
>SPBC16E9.14c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 386
Score = 25.0 bits (52), Expect = 2.8
Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 8 IPKLYQEYTTKT-PKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVS 64
IP + + T P+KLK+ + LF++ V+ G ++ T + + G + ++
Sbjct: 80 IPTFKETFAILTFPQKLKLTSSILFFLVAVGVLLSGDATILLTLSCSLIVEGVLIIIN 137
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 24.6 bits (51), Expect = 3.8
Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 74 LQVNPENKNEFQGLSAERGFADFIFAHLVLHIVVIN 109
L++ PE+K E++GL +E AD + ++L+ + +N
Sbjct: 373 LRLLPEDKEEYEGLRSE---ADKLNSNLLFKLQTLN 405
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 24.6 bits (51), Expect = 3.8
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 2 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGT 49
+SL + PK T L +D YL+Y+ ++ + Y +G+
Sbjct: 641 ASLCSHQPKFLLSLVYLTDLVLFFLDTYLWYMLISTMFSIAYSFYMGS 688
>SPBC1773.15 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 497
Score = 23.8 bits (49), Expect = 6.6
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Query: 33 IFLTAVIQFGYCC--LVGTFPFNS-----FLSGFISTVSCFVLGVCLRLQVNPENKNE 83
+F++AV GYC +VG F S + +S V C+ + + + + + N E
Sbjct: 405 VFMSAVSMIGYCVGNMVGPQTFRSTQAPKYQGAKVSFVVCYCVAIFIIIAIYAVNVRE 462
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 23.8 bits (49), Expect = 6.6
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 29 YLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTV 63
YLF + L G CL+ F +++ +IST+
Sbjct: 7 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTI 41
>SPBC1105.08 |||EMP70 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 629
Score = 23.8 bits (49), Expect = 6.6
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 36 TAVIQFGYCCLVGTFPFNSFLSGFISTVSCFV 67
TAV+ FGY L+ F FL G + F+
Sbjct: 588 TAVLYFGYSLLISVLVF--FLCGSVGFFGAFL 617
>SPAC1952.16 |rga9||RhoGAp, GTPase activator towards
Rho/Rac/Cdc42-like small GTPases|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 684
Score = 23.4 bits (48), Expect = 8.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 73 RLQVNPENKNEFQGL 87
+L +NP N N+F GL
Sbjct: 171 QLDINPSNVNKFDGL 185
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 23.4 bits (48), Expect = 8.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 29 YLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTV 63
YL + L G CL+ F +SF FI+T+
Sbjct: 8 YLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTI 42
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.332 0.146 0.446
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,567
Number of Sequences: 5004
Number of extensions: 20994
Number of successful extensions: 63
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 52
Number of HSP's gapped (non-prelim): 14
length of query: 112
length of database: 2,362,478
effective HSP length: 64
effective length of query: 48
effective length of database: 2,042,222
effective search space: 98026656
effective search space used: 98026656
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 48 (23.4 bits)
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