Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000188-TA|BGIBMGA000188-PA|IPR003038|Defender against
death DAD protein
(112 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X89080-1|CAA61451.1| 113|Caenorhabditis elegans dad-1 protein. 154 2e-38
AF039713-4|AAB96727.1| 113|Caenorhabditis elegans Dad (defender... 154 2e-38
Z79600-9|CAJ85761.1| 110|Caenorhabditis elegans Hypothetical pr... 29 0.57
Z79600-8|CAJ85760.1| 147|Caenorhabditis elegans Hypothetical pr... 29 0.57
U40800-2|AAA81489.2| 137|Caenorhabditis elegans Hypothetical pr... 29 1.00
U40028-10|AAA81121.3| 363|Caenorhabditis elegans Serpentine rec... 28 1.3
Z68009-5|CAA92007.1| 208|Caenorhabditis elegans Hypothetical pr... 27 3.0
U39666-2|AAA80411.2| 835|Caenorhabditis elegans Oligopeptide tr... 27 3.0
AF000418-1|AAC39119.1| 796|Caenorhabditis elegans low-affinity ... 27 3.0
Z69884-8|CAA93752.2| 582|Caenorhabditis elegans Hypothetical pr... 27 4.0
AY090484-1|AAM11893.1| 582|Caenorhabditis elegans low-affinity ... 27 4.0
AF078788-7|AAC26958.1| 227|Caenorhabditis elegans Hypothetical ... 27 4.0
Z81124-10|CAH60752.1| 241|Caenorhabditis elegans Hypothetical p... 26 5.3
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 26 5.3
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 26 5.3
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 26 5.3
U70851-3|AAB09129.1| 293|Caenorhabditis elegans Hypothetical pr... 26 7.0
U64846-9|AAG24117.3| 343|Caenorhabditis elegans Serpentine rece... 26 7.0
AF045642-7|AAC02583.1| 592|Caenorhabditis elegans Hypothetical ... 26 7.0
Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical pr... 25 9.3
U50313-5|AAA92329.1| 270|Caenorhabditis elegans Palmitoyl prote... 25 9.3
AY691522-1|AAU01161.1| 254|Caenorhabditis elegans palmitoyl pro... 25 9.3
AL031632-3|CAA21006.1| 283|Caenorhabditis elegans Hypothetical ... 25 9.3
>X89080-1|CAA61451.1| 113|Caenorhabditis elegans dad-1 protein.
Length = 113
Score = 154 bits (373), Expect = 2e-38
Identities = 69/111 (62%), Positives = 86/111 (77%)
Query: 2 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFIS 61
+ + V+ KL+ +Y T KLKIIDAY+ YI T + QF YC LVGTFPFNSFLSGFIS
Sbjct: 3 AQVVPVLSKLFDDYQKTTSSKLKIIDAYMTYILFTGIFQFIYCLLVGTFPFNSFLSGFIS 62
Query: 62 TVSCFVLGVCLRLQVNPENKNEFQGLSAERGFADFIFAHLVLHIVVINFIG 112
TV+ FVL CLR+QVN EN++EF +S ER FADFIFA+L+LH+VV+NF+G
Sbjct: 63 TVTSFVLASCLRMQVNQENRSEFTAVSTERAFADFIFANLILHLVVVNFLG 113
>AF039713-4|AAB96727.1| 113|Caenorhabditis elegans Dad (defender
against apoptoticdeath) homolog protein 1 protein.
Length = 113
Score = 154 bits (373), Expect = 2e-38
Identities = 69/111 (62%), Positives = 86/111 (77%)
Query: 2 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFIS 61
+ + V+ KL+ +Y T KLKIIDAY+ YI T + QF YC LVGTFPFNSFLSGFIS
Sbjct: 3 AQVVPVLSKLFDDYQKTTSSKLKIIDAYMTYILFTGIFQFIYCLLVGTFPFNSFLSGFIS 62
Query: 62 TVSCFVLGVCLRLQVNPENKNEFQGLSAERGFADFIFAHLVLHIVVINFIG 112
TV+ FVL CLR+QVN EN++EF +S ER FADFIFA+L+LH+VV+NF+G
Sbjct: 63 TVTSFVLASCLRMQVNQENRSEFTAVSTERAFADFIFANLILHLVVVNFLG 113
>Z79600-9|CAJ85761.1| 110|Caenorhabditis elegans Hypothetical
protein F59C6.14b protein.
Length = 110
Score = 29.5 bits (63), Expect = 0.57
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 21 KKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFIS 61
K + IDA +F +T ++ YC G F +L GF+S
Sbjct: 70 KMIVFIDA-VFSAIITLMLLIAYCFFAGGFNGKQYLDGFVS 109
>Z79600-8|CAJ85760.1| 147|Caenorhabditis elegans Hypothetical
protein F59C6.14a protein.
Length = 147
Score = 29.5 bits (63), Expect = 0.57
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 21 KKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFIS 61
K + IDA +F +T ++ YC G F +L GF+S
Sbjct: 107 KMIVFIDA-VFSAIITLMLLIAYCFFAGGFNGKQYLDGFVS 146
>U40800-2|AAA81489.2| 137|Caenorhabditis elegans Hypothetical
protein D2096.5 protein.
Length = 137
Score = 28.7 bits (61), Expect = 1.00
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 23 LKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSCFV 67
+ ++ ++F +F + V LV TF FN FLS +STV FV
Sbjct: 6 VSLLSVFIFLLFSSEVE-----ALVTTFHFNGFLSCGLSTVDFFV 45
>U40028-10|AAA81121.3| 363|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 40 protein.
Length = 363
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 8/47 (17%)
Query: 10 KLYQEYTTKTPKKLKIID------AYLFY--IFLTAVIQFGYCCLVG 48
K+Y E+TT T ++ II+ YLF + LT + F C++G
Sbjct: 102 KIYSEFTTNTTSEMIIIEKTLWDVPYLFIGSVMLTHYMAFSVTCMIG 148
>Z68009-5|CAA92007.1| 208|Caenorhabditis elegans Hypothetical
protein R09A8.5 protein.
Length = 208
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 7 VIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVI--QFGYCC 45
V+P L+ + KT K++ +D +L +IF +I GY C
Sbjct: 123 VLPALHYDNEHKTVKQMVKLDLHLIFIFFFHLILAAIGYRC 163
>U39666-2|AAA80411.2| 835|Caenorhabditis elegans Oligopeptide
transporter protein 2 protein.
Length = 835
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 48 GTFPFNSFLSGFISTVSCFVLGVCLRLQVNPENKN 82
G+ P +L +++T C + CL LQ NKN
Sbjct: 271 GSTPKEHWLLHYLTTHDCALDAKCLELQAEKRNKN 305
>AF000418-1|AAC39119.1| 796|Caenorhabditis elegans low-affinity
peptide transporter protein.
Length = 796
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 48 GTFPFNSFLSGFISTVSCFVLGVCLRLQVNPENKN 82
G+ P +L +++T C + CL LQ NKN
Sbjct: 232 GSTPKEHWLLHYLTTHDCALDAKCLELQAEKRNKN 266
>Z69884-8|CAA93752.2| 582|Caenorhabditis elegans Hypothetical
protein F31F6.6 protein.
Length = 582
Score = 26.6 bits (56), Expect = 4.0
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 7 VIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNS--FLSGFISTVS 64
VI ++ + + L+I D F + +T F + V T P N+ F SG++
Sbjct: 462 VIASIFIPIVAELARSLEI-DPLNFMLPVTISASFAFLLPVATPP-NAIVFSSGYLKVFD 519
Query: 65 CFVLGVCLRL 74
FV G+C+ L
Sbjct: 520 MFVSGLCVTL 529
>AY090484-1|AAM11893.1| 582|Caenorhabditis elegans low-affinity
dicarboxylate transporterINDY1 protein.
Length = 582
Score = 26.6 bits (56), Expect = 4.0
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 7 VIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNS--FLSGFISTVS 64
VI ++ + + L+I D F + +T F + V T P N+ F SG++
Sbjct: 462 VIASIFIPIVAELARSLEI-DPLNFMLPVTISASFAFLLPVATPP-NAIVFSSGYLKVFD 519
Query: 65 CFVLGVCLRL 74
FV G+C+ L
Sbjct: 520 MFVSGLCVTL 529
>AF078788-7|AAC26958.1| 227|Caenorhabditis elegans Hypothetical
protein ZC190.8 protein.
Length = 227
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 38 VIQFGYCCLVGTFPFNSFLSGFISTVSCFVLGVCLRLQVNPENK 81
+IQ ++G F F + FI ++ F+LG CL ++ P +K
Sbjct: 12 LIQKSEYFIIGVFLI--FRTAFIFIITGFILGYCLHVKDPPSDK 53
>Z81124-10|CAH60752.1| 241|Caenorhabditis elegans Hypothetical
protein T21B4.15 protein.
Length = 241
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 2 SSLTAVIPKLYQEYTTKTPKKLKIIDAY 29
S T +PKL + T+K PKK + Y
Sbjct: 206 SPTTPTVPKLVSKVTSKKPKKAPLFAKY 233
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like
protein.
Length = 123
Score = 26.2 bits (55), Expect = 5.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 29 YLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTV 63
YLF + L G C++ F +SF + FIST+
Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTI 41
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 26.2 bits (55), Expect = 5.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 29 YLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTV 63
YLF + L G C++ F +SF + FIST+
Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTI 41
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 26.2 bits (55), Expect = 5.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 29 YLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTV 63
YLF + L G C++ F +SF + FIST+
Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTI 41
>U70851-3|AAB09129.1| 293|Caenorhabditis elegans Hypothetical
protein M02B7.4 protein.
Length = 293
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 29 YLFYIFLTAVIQFGYCCLVGTFPF 52
+ + F+TAVI FG CL F
Sbjct: 2 FFLFFFVTAVILFGVLCLTAFMAF 25
>U64846-9|AAG24117.3| 343|Caenorhabditis elegans Serpentine
receptor, class h protein193 protein.
Length = 343
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 18 KTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPF 52
KTP+++K + YLF + + ++ F Y + T PF
Sbjct: 43 KTPERMKTVKWYLFALH-SWIVVFDYSLSLLTVPF 76
>AF045642-7|AAC02583.1| 592|Caenorhabditis elegans Hypothetical
protein C17H12.4 protein.
Length = 592
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 30 LFYIFLTAVIQFGYCCLVGTFPFNSFL 56
+F IFLT + FG CC VG N ++
Sbjct: 551 IFTIFLTGYL-FGRCCCVGNQDRNLYI 576
>Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical
protein K09E9.1 protein.
Length = 508
Score = 25.4 bits (53), Expect = 9.3
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 20 PKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSCFVLGVCLRL-QVNP 78
P+K D + I L + Q GY + +F+ S C + + ++NP
Sbjct: 35 PRKRMREDFGYYEIRLLVLTQLGYIPVAAAMLMTAFMEP--SPEWCDTVRETEQSWKLNP 92
Query: 79 ENKNEFQGLSAERGFA 94
N EF LS ERGFA
Sbjct: 93 NN--EFYSLSVERGFA 106
>U50313-5|AAA92329.1| 270|Caenorhabditis elegans Palmitoyl
protein thioesteraseprotein 1 protein.
Length = 270
Score = 25.4 bits (53), Expect = 9.3
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 58 GFISTVSCFVLGVCLRLQVNPENKNEFQGLSAERGFADFIFA 99
GF + + V C++++ +PE KN + + +G A F+ A
Sbjct: 47 GFYANTNELVYMACIKIKNDPELKNGYNAIGFSQG-AQFLRA 87
>AY691522-1|AAU01161.1| 254|Caenorhabditis elegans palmitoyl
protein thioesterase protein.
Length = 254
Score = 25.4 bits (53), Expect = 9.3
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 58 GFISTVSCFVLGVCLRLQVNPENKNEFQGLSAERGFADFIFA 99
GF + + V C++++ +PE KN + + +G A F+ A
Sbjct: 47 GFYANTNELVYMACIKIKNDPELKNGYNAIGFSQG-AQFLRA 87
>AL031632-3|CAA21006.1| 283|Caenorhabditis elegans Hypothetical
protein Y32B12B.3 protein.
Length = 283
Score = 25.4 bits (53), Expect = 9.3
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 9 PKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSF 55
P Y +Y K P + +I L YI + + F YC + + P + F
Sbjct: 113 PIFYFKYHRKFPISIIVI-LTLTYILVDQYVTFEYCNYIISVPLDCF 158
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.332 0.146 0.446
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,753,069
Number of Sequences: 27539
Number of extensions: 107407
Number of successful extensions: 358
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 342
Number of HSP's gapped (non-prelim): 26
length of query: 112
length of database: 12,573,161
effective HSP length: 72
effective length of query: 40
effective length of database: 10,590,353
effective search space: 423614120
effective search space used: 423614120
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 53 (25.4 bits)
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