Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000187-TA|BGIBMGA000187-PA|IPR002345|Lipocalin
         (1103 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    24   6.6  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    24   6.6  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    24   6.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   8.7  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   8.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   8.7  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 4/28 (14%)

Query: 899 WDLLIIDTELEV----VDSFKNTDKTKP 922
           W +L+ID EL+V      +F N  KT P
Sbjct: 66  WSVLVIDPELDVDQNGFRNFTNLKKTHP 93


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 425 FNHSTIIISFLGSAISQFKSFHSPRMRKQLVVEMANEYFY 464
           FN  TI+ S       QF+  + P++R  L+    N +F+
Sbjct: 69  FNFWTILFS-RSDFFQQFECDNEPKLRHYLIFIFVNVFFW 107


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 768 SSTKIALSLLSSPENPNPESVTDLSL 793
           +ST  + S  S  ++P PESV  LSL
Sbjct: 207 ASTASSASNYSPSQSPEPESVRPLSL 232


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 1/26 (3%)

Query: 876 SPISK-CFVDDPFIVMPQIKILSPWD 900
           +P++K    D  F+ +PQ+  L  WD
Sbjct: 392 NPLNKGTEADSSFVTLPQLHSLDEWD 417


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 54  VRFKLLNNTFEFPVVKPKRNSYEWYIPKGILKKNWIHKRVSLIPAVIVIFYD 105
           VR++LLN   E  V +  R S E +     +K+    K +S +P  ++   D
Sbjct: 207 VRYQLLNEYLETLVQETNRTSVEGWTDVSNVKRK--SKEISKLPKSMLAISD 256


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 54  VRFKLLNNTFEFPVVKPKRNSYEWYIPKGILKKNWIHKRVSLIPAVIVIFYD 105
           VR++LLN   E  V +  R S E +     +K+    K +S +P  ++   D
Sbjct: 207 VRYQLLNEYLETLVQETNRTSVEGWTDVSNVKRK--SKEISKLPKSMLAISD 256


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.134    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 268,440
Number of Sequences: 317
Number of extensions: 11727
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 6
length of query: 1103
length of database: 114,650
effective HSP length: 64
effective length of query: 1039
effective length of database: 94,362
effective search space: 98042118
effective search space used: 98042118
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)