Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000187-TA|BGIBMGA000187-PA|IPR002345|Lipocalin
(1103 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46763| Best HMM Match : Isochorismatase (HMM E-Value=0.66) 294 3e-79
SB_10303| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.10
SB_7667| Best HMM Match : DUF827 (HMM E-Value=0.33) 36 0.14
SB_44892| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.24
SB_8710| Best HMM Match : PKD_channel (HMM E-Value=0) 33 1.7
SB_45357| Best HMM Match : Sigma_1s (HMM E-Value=5.6) 32 2.2
SB_36190| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.2
SB_34713| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.2
SB_8164| Best HMM Match : rve (HMM E-Value=0.00069) 32 2.9
SB_45177| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 5.1
SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042) 31 5.1
SB_48915| Best HMM Match : Pep_M12B_propep (HMM E-Value=0.0031) 31 5.1
SB_43564| Best HMM Match : zf-C2H2 (HMM E-Value=1.2) 31 5.1
SB_13773| Best HMM Match : TolA (HMM E-Value=0.042) 30 8.9
>SB_46763| Best HMM Match : Isochorismatase (HMM E-Value=0.66)
Length = 439
Score = 294 bits (721), Expect = 3e-79
Identities = 126/240 (52%), Positives = 175/240 (72%), Gaps = 1/240 (0%)
Query: 9 TEFPTEIILKPLALIGLSGLDAVNNAVHKEIWDAFANNRRADRTPVRFKLLNNTFEFPVV 68
++FP E+ +PL L+ LSGLD +HK IW++F NN +R P+ +KL+ EFP
Sbjct: 11 SDFPPELSTRPLGLVALSGLDTAQKQLHKAIWESF-NNIATERAPLSYKLVPKDHEFPKA 69
Query: 69 KPKRNSYEWYIPKGILKKNWIHKRVSLIPAVIVIFYDMDWNDTQWNEKIIECASKVQSIR 128
KPKR SY+WYIPKGI+K W+ K ++L+PAV+V+FY++DWN+ QW +K +CA++V+ +R
Sbjct: 70 KPKRTSYDWYIPKGIIKSKWMLKHLNLVPAVVVVFYELDWNNAQWKDKQADCAAQVEKVR 129
Query: 129 AAVEGHATRVAVVVIQSRQSPPPSEYMLGAERAQALCAACEIQSKSLFVLPHGDHLMGYI 188
A++ G T+VAVV+IQ PP E M AERA ALC+ACE+ +KSLFVLP DHL GY
Sbjct: 130 ASLHGRNTKVAVVLIQKNTPLPPGEDMQAAERAAALCSACELSAKSLFVLPLTDHLPGYT 189
Query: 189 VRLENAFYDIAQNYYHHEAKNIKQHRDHLNKTTHQYLFVRHQFKLGYLNELKQDINTAHK 248
LENAFY++ Q+YYH E + +K H++ LNK+THQ L VRHQFK+ + NEL+QD ++A K
Sbjct: 190 KMLENAFYELGQSYYHGEGRRVKAHKEFLNKSTHQLLLVRHQFKVAFFNELRQDPHSAVK 249
Score = 188 bits (458), Expect = 2e-47
Identities = 87/191 (45%), Positives = 122/191 (63%), Gaps = 8/191 (4%)
Query: 189 VRLENAFYDIAQNYYHHEAKNIKQHRDHLNKTTHQYLFVRHQFKLGYLNELKQDINTAHK 248
V+LENAFY++ Q+YYH E + +K H++ LNK+THQ L VRHQFK+ + NEL+QD ++A K
Sbjct: 248 VKLENAFYELGQSYYHGEGRRVKAHKEFLNKSTHQLLLVRHQFKVAFFNELRQDPHSAVK 307
Query: 249 HYVHAYNNLLETRTVDTNLHEVRTVAGYINYKLCKILFALNLPRDAISQLKSHIEKYKSR 308
HY AYN + E R D N+ EV+ VAG+INYK+C++ F + P DAISQ + H++ +K +
Sbjct: 308 HYRQAYNLVTELRLTDVNMLEVKVVAGFINYKICRLSFHASAPLDAISQFRKHVDLWKEK 367
Query: 309 VGSTDLLFEHYAWLARQ------YSAFGELFDEAIRAGLP--AIQSQHPGFYYQHAAQFT 360
+G L FEH AWL++ S + I +++QHPGFYYQ AA
Sbjct: 368 IGCPQLAFEHVAWLSKHKANPHLNSTLKRIMTYCIADDYDYFHLKTQHPGFYYQQAANNA 427
Query: 361 VKRRQAMRSLC 371
+ RRQ LC
Sbjct: 428 IIRRQLCEGLC 438
>SB_10303| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 36.7 bits (81), Expect = 0.10
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 730 VTSRECKWSIEVTNCSPALQGEWFPTTFTVTNNEEIAVSSTKIALSLLSSPE 781
+T R K + V + SP L E+F ++ N EE +VS +I + P+
Sbjct: 2 ITPRAPKMHLSVNHLSPVLVNEFFKVKLSLVNQEETSVSDVRIVMGFQEEPD 53
>SB_7667| Best HMM Match : DUF827 (HMM E-Value=0.33)
Length = 806
Score = 36.3 bits (80), Expect = 0.14
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Query: 989 PVSVKVD-YPAVIELLTSVPL-KCILKGNTNTPIR-LSLVVKWTDDYIFSGYKKLSVMVP 1045
PV V V+ YPA +L+ S K +KG T+ L L + W+DD I G + M+
Sbjct: 139 PVPVLVNNYPANDKLVESQSKRKSHVKGITHKDGHTLDLEITWSDDDIIKGISVRNPMIS 198
Query: 1046 PKGQVELKYNI-RPLFAGNTMPPRITATVIGDNSSQDAV-SEMFEKAFPETIFVVPKYNN 1103
+ + ++ +P FA + R +V D S+D + SE+F+ +V KY+N
Sbjct: 199 DHHAIHCELDLCKPQFAKKVVNCRKLRSVDIDQLSEDLLNSELFQNQQVNINNLVIKYDN 258
>SB_44892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 35.5 bits (78), Expect = 0.24
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 402 SADPHDPQKEQAAILALQYNERIFNHSTIIISFLGSAISQFKSFHSPRMRKQLVVEMANE 461
S DP P K L+ ++ + ++ + AI +K+ R K L +++A
Sbjct: 412 SVDPWGPAKRLQEALSSKHA-----YESLYLELAELAIQIYKNIGRARSAKSLGMDLAQF 466
Query: 462 YFYSADYGKALTLLTHMLWDYRREKWWYLASHVL 495
Y ++ +A LL + YR E+W LA+ L
Sbjct: 467 YAARNEFDRAEPLLVDVYKMYRHERWTLLATQAL 500
>SB_8710| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 1627
Score = 32.7 bits (71), Expect = 1.7
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Query: 94 SLIPAVIVIFYDMDWNDTQWNEKIIE-CASKVQSIRAAVEGHATRVAVVVIQSRQSPPPS 152
SL A V+FY M W + N+ I S VQ I +A ++ + PP
Sbjct: 961 SLTSAAFVLFYSMMWGTEKSNQWIASVMISLVQDIFLIQPFKVILIATMLSLIFRKPPED 1020
Query: 153 EYMLGAERAQALCAACEIQSKSLFVLP 179
E + G + A A Q+K +V P
Sbjct: 1021 EEIAGEQAAPAAPKMSAEQNKLKYVKP 1047
>SB_45357| Best HMM Match : Sigma_1s (HMM E-Value=5.6)
Length = 322
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 651 KVKRFLCQFKPNPKDVGSDLQIKCVSFVLDSERKRKIIL 689
K K +F P P+DVG LQ+ ++ L S + R +L
Sbjct: 25 KTKLIPFKFTPQPEDVGKQLQVSSIALELGSHKSRCAVL 63
>SB_36190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 993
Score = 32.3 bits (70), Expect = 2.2
Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 4/132 (3%)
Query: 204 HHEAKNIKQHRDHLNKTTHQYLFVRHQFKLGYLNELKQDINTAHKHYVHAYNNLLETRTV 263
HHE + I+ + HL + L F + +L+ D K + H LL +
Sbjct: 79 HHETQVIEILKKHLQISDSLALEPLLDFLVNLARDLQNDFYPYFKDFFHILVRLLSVNSQ 138
Query: 264 DTN-LHEVRTVAGYINYKLCKILFALNLPRDAISQLKSHIEKYKSRVGSTDLLFEHYAWL 322
D+ L +V + GY+ L + + D + L S + + ++ E +A+L
Sbjct: 139 DSALLEQVFSALGYLFKFLWRYMIK---DMDNVYSLYSPLLSQQHKLHIQQFAAESFAFL 195
Query: 323 ARQYSAFGELFD 334
AR+ +L D
Sbjct: 196 ARKAKDQNKLLD 207
>SB_34713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 32.3 bits (70), Expect = 2.2
Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 727 VASVTSRECKWSIEVTNCSPALQGEWFPTTFTVTNNEEIAVSSTKIALSLLSSPENPNPE 786
V+++TS++ + + C +G T V + E +VSS + L + E+ +P+
Sbjct: 28 VSAITSKDTTPAQDCETCKD--EGMTTSTCSLVISAENFSVSSLSSSTELFQTKESGDPQ 85
Query: 787 SVTDLSLKEGEAQLQPLHISVGNVNRSGT 815
S + ++E + Q+ L ++ + NR T
Sbjct: 86 SNLNTQVRELQIQVLSLTQALEDANRENT 114
>SB_8164| Best HMM Match : rve (HMM E-Value=0.00069)
Length = 1117
Score = 31.9 bits (69), Expect = 2.9
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 489 YLASHVLNRALQCAYLAAKIQDYLQLSIEALSKNIQVPNNDKDRIFRNIMSVIHLNIPA- 547
++A HV LA +++++ ++ + ++S+N+ +K + ++ P+
Sbjct: 566 HVARHVNTNGASTHELATQMRNFKEVLVLSISRNLTNKLRNKLLMNLHVRRWRESRAPSH 625
Query: 548 PEPDLPSSSQSKAVELWQSMIEK 570
P PDL + +SK WQS +K
Sbjct: 626 PRPDLNTLDESKLEGAWQSKTDK 648
>SB_45177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 863
Score = 31.1 bits (67), Expect = 5.1
Identities = 31/130 (23%), Positives = 61/130 (46%), Gaps = 14/130 (10%)
Query: 431 IISFLGSAISQFKSFHSPRMRKQLVVEMANEYFYSADYGKALTLLTHMLWDYRR------ 484
+IS L S + + R L+V+MA+E + K L + + D R
Sbjct: 661 VISILTSLVKP--TSQDNRKVLDLIVKMADEISQDTESVKGLDRIQKTVEDLGRFLQPSD 718
Query: 485 ---EKWWYLASHVLNRALQCAYLAAKIQDYLQLSIEALSKNIQVPNNDKDRIFRNIMSVI 541
++ + L + N + L+ ++ ++ ++EALSKN+ P++ DR+ +++SVI
Sbjct: 719 AGQKQLFELTDKLCNTLIHRVKLSDDLKPLIR-TVEALSKNLSGPSS--DRVVISLLSVI 775
Query: 542 HLNIPAPEPD 551
+P + D
Sbjct: 776 EAALPLTKED 785
>SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042)
Length = 4607
Score = 31.1 bits (67), Expect = 5.1
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 725 LRVASVTSRECKWSIEVTNCSPALQGEWFPTTFTVTNNEEIAVSSTKIALSLLSSPENPN 784
+ +++ + S+ VT C L+G W T+T+NE S ++ L + E
Sbjct: 1587 IEISNTLGHSLRDSLPVTKCFKRLEGRWEEYKNTITSNE--ITSPIQVVCHYLLAREKGT 1644
Query: 785 PESVTDLSLKEGEAQLQPL 803
E+ T+L L G +L+PL
Sbjct: 1645 LET-TEL-LFSGPQKLKPL 1661
>SB_48915| Best HMM Match : Pep_M12B_propep (HMM E-Value=0.0031)
Length = 511
Score = 31.1 bits (67), Expect = 5.1
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 414 AILALQYNERIFNHSTIIISFLGSAISQFKSFHSPRMRKQLVVEMANEYFYSADYGKALT 473
+I+AL YN+ + + +G AI F S P + + + +YFY AD +
Sbjct: 115 SIVALSYNDGLERNK------VGGAI--FGSTQIPSKFARKIQQ--TKYFYLADLCQGT- 163
Query: 474 LLTHMLWDYRREKWWYLA-SHVLNRALQC 501
LT +W R K + LA SH L RA QC
Sbjct: 164 -LTFDMWQNIRAKLFSLAASHFLKRATQC 191
>SB_43564| Best HMM Match : zf-C2H2 (HMM E-Value=1.2)
Length = 474
Score = 31.1 bits (67), Expect = 5.1
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 10/103 (9%)
Query: 633 IEIPVTDDINQTITLEGSKVKRFLCQFKPNPKDVGSDLQIKCVSFVLDSERKRKIILNFK 692
+ +P+ DDIN+ L+ K+ + K NP+ G VS + + +L
Sbjct: 1 MSLPLQDDINEKSVLDSHFHKKPKSREKVNPES-GRGFD-DLVSIL-------ETLLQHG 51
Query: 693 TDDKKSESIIHPELLHFIMSPKSDYEFDCIVPLRVASVTSREC 735
DD S+ L H KSDY+ C + L S +EC
Sbjct: 52 ADDASVRSL-KDNLRHLKQYIKSDYKIHCSIALSALSDPKKEC 93
>SB_13773| Best HMM Match : TolA (HMM E-Value=0.042)
Length = 1558
Score = 30.3 bits (65), Expect = 8.9
Identities = 31/144 (21%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
Query: 437 SAISQFKSFHSPRMRKQLVVEMANEYFYSADYGKALTLLTHMLWDYRREKWWYLASHVLN 496
+A+S R++LVV+M + S +A+ L + + ++ + SH+ +
Sbjct: 797 AAVSAVDEEIESNTRRRLVVDMMQKGKLSETDQQAI--LDKFMVEAEEQRERFKNSHIRS 854
Query: 497 RALQCAYLAAKIQDYLQLSIEALSKNIQVPNN------DKDRIFRNIMSVIHLNIPAPEP 550
A+ A LAA+ + +++ E KN +K+R FR M + N+ +
Sbjct: 855 EAVLAAKLAARKRLRAEMAKEKAMKNELKEMGKKQILEEKERKFRKEMELQEGNLSQEQA 914
Query: 551 DLPSSSQSKAVELWQSMIEKEPLQ 574
DL + +EL + ++ E ++
Sbjct: 915 DLLLDQHKQEMELMERNLDAEKMR 938
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.134 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,590,020
Number of Sequences: 59808
Number of extensions: 1594592
Number of successful extensions: 3818
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3807
Number of HSP's gapped (non-prelim): 18
length of query: 1103
length of database: 16,821,457
effective HSP length: 90
effective length of query: 1013
effective length of database: 11,438,737
effective search space: 11587440581
effective search space used: 11587440581
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)
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