Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000187-TA|BGIBMGA000187-PA|IPR002345|Lipocalin
(1103 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC691.03c |apl3||AP-2 adaptor complex subunit Alp3 |Schizosacc... 40 0.001
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 33 0.22
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 31 0.89
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 30 1.5
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 30 1.5
SPBC119.01 |rpn3|SPBPJ4664.07|19S proteasome regulatory subunit ... 30 1.5
SPAC144.18 |||nucleotide sugar transporter |Schizosaccharomyces ... 30 2.0
SPAC29B12.10c |||OPT oligopeptide transporter family|Schizosacch... 30 2.0
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 29 2.7
SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces... 29 3.6
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 29 3.6
SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subuni... 29 4.7
SPBC1718.02 |hop1||linear element associated protein Hop1|Schizo... 29 4.7
SPAC17H9.04c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 29 4.7
SPBC19G7.06 |mbx1||MADS-box transcription factor Mbx1|Schizosacc... 28 6.3
SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase |Schizosac... 28 6.3
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 28 8.3
SPCC663.12 |cid12||poly|Schizosaccharomyces pombe|chr 3|||Manual 28 8.3
>SPBC691.03c |apl3||AP-2 adaptor complex subunit Alp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 878
Score = 40.3 bits (90), Expect = 0.001
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 15/171 (8%)
Query: 681 SERKRKIILNFKTDDKKSESIIHPELLHFIMSPKSDYEFDCIVPLRVASVT-SRECKWSI 739
S RK+ + L + D+++ +I +LL ++ S + D I + + S T + + +W +
Sbjct: 373 SLRKKSLELLYMMCDEENAKLIVADLLQYLPHLDSVTQEDLISKVAIISETFATDYEWYV 432
Query: 740 EVT------NCSPALQGEWFPTTFTVTNNEEIAVSSTKIALSLLSSPENPNPESVTDLSL 793
+VT A G W + NNEEI +TK SLL S E++ + +
Sbjct: 433 DVTIQLLRIAGKSADDGVWHQLVHVIVNNEEIQEYATKRLFSLLQS------ETIHECLV 486
Query: 794 KEGEAQLQPL-HISVGNVNRSGTHT-NTFYLKTNRTATITVQIRISYIIDL 842
K G L H+ + H +T Y K N ++ T + ++ +I L
Sbjct: 487 KAGGYVLGEFGHLITDYPDSQPVHQFSTIYRKLNVSSPSTRVLLLTTLIKL 537
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 725 LRVASVTSRECKWSIEVTNCSPALQG-----EWFPTTFTVTNNEEIAVSSTKIALSL-LS 778
+R+A + + S+E+ N S A Q EW + V+NN ++ + K+AL+L +
Sbjct: 196 IRLADIYDLLGELSLEIENFSQASQDLKTALEWKEKVYNVSNNTLLSEAHYKLALALEFT 255
Query: 779 SPENPNPES 787
+PE+P+ +S
Sbjct: 256 NPEDPSNKS 264
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 31.1 bits (67), Expect = 0.89
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 955 RVGLYNITWRRKSNLHGLCVMSSTALSGLPIDQC-PVSVKVDYPAVIELLTSVPLKCILK 1013
R L+++ + S L + SS + SGL +D+ P S K D P++ L S+ K L
Sbjct: 129 RTLLHHLPSQEISTLLSSSLTSSPSNSGLSLDKSLPSSPKGDSPSLSSSLPSLTTKSNLS 188
Query: 1014 GNTN 1017
GN N
Sbjct: 189 GNLN 192
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 276 YINYKLCKILFALNLPRDAISQLKSHIEKYKSRVGSTDLLFEHYAWLARQYSA 328
++ Y+ CK+LF +N ++ ++ S K+ + S+D F Y W + +SA
Sbjct: 89 FVVYEKCKVLFGVNKKYTSLHEIDSSKVGIKASLDSSDKQFYRY-WGGQIFSA 140
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 179 PHGDHLMGYIVRLENAFYDIAQNYYHHEAKNIKQHRDHLNK 219
P G H G + L++ +YD+ YY H KN ++ D + K
Sbjct: 1061 PDGLHDFG-VYSLKDEYYDLVDPYYFHYNKNEREESDTILK 1100
>SPBC119.01 |rpn3|SPBPJ4664.07|19S proteasome regulatory subunit
Rpn3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 497
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 225 LFVRHQFKLGYLNELKQDINTAHKHYVHA 253
L +R+Q+ LG + ++ D TAH+H V A
Sbjct: 246 LAIRYQYYLGRIRAIQLDYTTAHEHLVSA 274
>SPAC144.18 |||nucleotide sugar transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 345
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 470 KALTLLTHMLWDYRREKWWYLASHVLNRALQCAYLAAKIQDYLQLSIEALSKNIQV 525
K L ++ + +D+R K+W+ S +L + Y A+K +L + + + KN+ +
Sbjct: 62 KRLKVINYRDFDFREAKFWFPISFLL---VAMIYTASKALQFLSVPVYTIFKNLTI 114
>SPAC29B12.10c |||OPT oligopeptide transporter
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 851
Score = 29.9 bits (64), Expect = 2.0
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
Query: 987 QCPVSVKVDYPAVIELLTSVPLKCILKGNTNTPIRLSLVVKWTDDYIFSGYKKLSVMVPP 1046
QCPV + +I ++ +P + +L+G TN + L+++ + YI G ++M+
Sbjct: 557 QCPVWALI-VALLIFIVNFIP-QGVLEGITNQHVGLNIITELIGGYILPGKPLANLMIKL 614
Query: 1047 KGQVELKYNI---RPLFAGNTM--PPRIT------ATVIGDNSSQDAVSEMFEKAFP 1092
G + ++ + R L M PPRI AT++G +Q AV E P
Sbjct: 615 YGFIPMRQGLEFSRDLKLAQYMKIPPRILFFVQLFATILG-GITQVAVQEWMNYHIP 670
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 573 LQVAVDMANISSFLEIKPKFKQMKYRMDELIEVELYVRLTYPAVLEVKKVYLTISSQSE 631
L+ A +S ++ PK +Q+ +R+DEL+ ++ LT+ L +Y+ +S +E
Sbjct: 252 LEDAKTKEGLSDEMKSSPKLQQIYHRLDELLNKLKHLTLTHRWTLRETDLYVYRASLAE 310
>SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 857
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 754 PTTFTVTNNEEIA---VSSTKIALSLLSSPENPNPESVTD--LSLKEGEAQLQPLHISVG 808
PT+ T N +A ++S+ SLL ++ PE ++ L L+ Q P +SVG
Sbjct: 235 PTSSTYFLNSVLASLQLNSSNTPESLLIDYQSKIPEDLSSSLLPLELNTLQSTPTSVSVG 294
Query: 809 NVNRSGTHTNTFYLKTNRTATITVQ 833
+ + GTH + T+ ++ +++
Sbjct: 295 SASSQGTHEYSIINLTSNHSSFSLK 319
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 406 HDPQKEQAAIL-ALQYNERIFNHSTIIISFLGSAISQFKSFHSPRMRKQ 453
H PQ A+++ +++ +E++ NHS + L + Q FH RK+
Sbjct: 96 HSPQSFSASVITSMEIHEQLANHSLTLQKTLSAFSDQVIEFHKNAERKR 144
>SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subunit
Apc5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 737
Score = 28.7 bits (61), Expect = 4.7
Identities = 39/178 (21%), Positives = 79/178 (44%), Gaps = 13/178 (7%)
Query: 431 IISFLGSAISQFKSFH-SPRMRKQLVVEMANEYFYSADYGKALTLLTHMLWDYRREKWWY 489
I+S +I Q H SP + L+ + + + A+ G+ L + T + + + +
Sbjct: 437 ILSMTYISIYQKNHVHDSPAL--DLLQSLITKAWRYAELGRWLDVATILSTAEVQSQRSF 494
Query: 490 LASHVLNRALQCAYLAAKIQDYLQLSIEALSKNIQVPNNDKDRIFRNIMSVIHLNIPAPE 549
+H+ R YL+ I + + KN+ +DK FR + + L
Sbjct: 495 QCAHLYGREKTFIYLSKAIDEKNHMDATLYLKNLNGFRHDKMSTFRTQLYALRL------ 548
Query: 550 PDLPSSSQSKAVELWQSMIEKEPLQVAVDMANISSFLEIKPKFK-QMKYR-MDELIEV 605
D+ + S+A+E ++E EP ++A++ FL++ + +M R + EL+E+
Sbjct: 549 -DISLGNLSQAIEGIDKLLE-EPEKLAIEWVLQLMFLKVDIYMRTEMSNRAVFELLEI 604
>SPBC1718.02 |hop1||linear element associated protein
Hop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 28.7 bits (61), Expect = 4.7
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 20/117 (17%)
Query: 587 EIKPKFKQMKYRMDELIEVELYVRLTYPAVLEVKKV----YLTISSQSETIEIPVTDDIN 642
++KP ++ +D+ + L + TY L KV YL ISSQ ++I
Sbjct: 58 QLKPTVVSLQAGVDKEADSFLEMMKTYIFSLVSMKVPFTVYLIISSQCKSI--------- 108
Query: 643 QTITLEGSKVKRFLCQFKPNPKDVGSDLQIKCVSFVLDSERKRKIILNFKTDDKKSE 699
LE V++ + F NP GS+ +I C SFV +R +I F + + K+E
Sbjct: 109 ----LEDDAVEKEIFSFTINP---GSEEKICCESFVSYQRSERFVIKLFLSGNVKTE 158
>SPAC17H9.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 604
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 774 LSLLSSPENPNPESVTDLSLKEGEAQLQPLHISVG 808
+S L SP P PESV DL + E L IS+G
Sbjct: 1 MSKLPSPTMPLPESVGDLVVLHFETNLDDHGISIG 35
>SPBC19G7.06 |mbx1||MADS-box transcription factor
Mbx1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 28.3 bits (60), Expect = 6.3
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Query: 718 EFDCIVPLRVASVTSRECKWSIEVTNCSPALQGEWFPTTFTVTNNEEIAVSSTKIALSLL 777
+F + PLR+ASVT+ + S NCS A E +FT+ SST +
Sbjct: 87 DFVTVDPLRIASVTTYSAQPS---NNCSSATDSENDFQSFTIK-------SSTTYHTTPT 136
Query: 778 SSPENPNPESVT 789
++ EN ES+T
Sbjct: 137 TASENKKIESIT 148
>SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 853
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 620 KKVYLTISSQSETIEIPVTDDINQTITLEGSKV----KRF-LCQFKPNPKDVGSDLQIKC 674
+K +T+S E+I +P DI + EG+ + F L F P+ K+ GS++
Sbjct: 107 QKEPITVSHFGESIFLPYHQDIEWITSTEGTVLYYDQSTFSLSLFYPDGKEYGSNVDSLI 166
Query: 675 VSFVL 679
SFVL
Sbjct: 167 TSFVL 171
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 406 HDPQKEQAAILALQYNERIFNHSTIIISFLGSAISQ 441
HDP A ILAL Y+E + T++++ G+ S+
Sbjct: 198 HDPA---AVILALMYSEEVLIDKTVVVANFGATRSE 230
>SPCC663.12 |cid12||poly|Schizosaccharomyces pombe|chr 3|||Manual
Length = 336
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 578 DMANISSFLE-IKPKFKQMKYRMDELIEVELYVR 610
D A + SFLE + PK +++KYR L +++ ++R
Sbjct: 20 DNARLYSFLEFVSPKIEELKYRKLLLEKLQTHIR 53
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.134 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,287,736
Number of Sequences: 5004
Number of extensions: 233519
Number of successful extensions: 723
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 716
Number of HSP's gapped (non-prelim): 19
length of query: 1103
length of database: 2,362,478
effective HSP length: 80
effective length of query: 1023
effective length of database: 1,962,158
effective search space: 2007287634
effective search space used: 2007287634
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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