Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000187-TA|BGIBMGA000187-PA|IPR002345|Lipocalin
(1103 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0510 + 29637160-29637506,29637714-29637775,29638047-296381... 137 4e-32
01_06_1289 - 36010924-36011001,36011441-36011518,36012321-360124... 38 0.059
07_03_0627 - 20061951-20062391,20062912-20062960,20063386-200638... 34 0.55
01_07_0160 - 41563109-41563468,41563566-41563985,41564082-415642... 33 1.3
07_03_0067 + 13018729-13019187,13019197-13019901 32 2.2
06_01_0209 + 1587656-1587876,1587964-1588055,1590520-1590545,159... 31 3.9
08_02_0089 + 12241337-12241975 31 6.8
07_03_1287 + 25510813-25510862,25511326-25511504,25511715-255120... 31 6.8
02_01_0679 - 5048653-5051394 31 6.8
10_08_0445 + 17989438-17990895 30 8.9
05_02_0073 + 6336649-6336710,6336846-6336894,6338079-6338468,633... 30 8.9
01_06_1820 + 40120861-40120863,40122484-40122612,40122710-401228... 30 8.9
>02_05_0510 +
29637160-29637506,29637714-29637775,29638047-29638161,
29638296-29638419,29638604-29638684,29639122-29639463,
29639562-29639728,29639810-29640639,29641103-29642568
Length = 1177
Score = 137 bits (332), Expect = 4e-32
Identities = 127/467 (27%), Positives = 206/467 (44%), Gaps = 42/467 (8%)
Query: 80 PKGILKKNWIHKRVSLIPAVIVIFYDMDW---NDTQWNEKIIECASKVQSIRAAVEGHAT 136
P GILKK+W+ K + +PA + + D + QW ++ S ++++++ ++G T
Sbjct: 69 PAGILKKDWLLKHRTRVPAAVAAMFRADQVSGDPAQW----LQACSDLENLKSVIQGRNT 124
Query: 137 RVAVVVIQSRQSPPPSEYMLGAERAQALCAACEIQSKSLFVLPHGDHL--MGYIVRLENA 194
++ V+++QS+ SE + A R +A EI SK L VL D + + +L
Sbjct: 125 KLVVILVQSQAGDELSEDVTVALRKRA-----EIDSKHLVVLVERDEMEWTKSLNKLTTV 179
Query: 195 FYDIAQNYYHHEAKNIKQHRDHLNKTTHQYLFVRHQFKLGYLNELKQDINTAHKHYVHAY 254
F ++ YY E + +K + N ++ + L +R+ FK+ E ++D A K Y
Sbjct: 180 FAELCTTYYKDEGRRVKARIEKRNFSSVE-LSIRYCFKVAVYAEFRRDWPEALKFYEEGI 238
Query: 255 NNLLE-----TRTVDTN-LHEVRTVAGYINYKLCKILFALNLPRDAISQLKSHIEKYKSR 308
L E TR T L EV+ VA ++K+ IL AI+ + HI Y+
Sbjct: 239 RVLREMIGTSTRLPPTQRLVEVKAVAEQFHFKISTILLHGGKVVGAITWFRKHIRSYERV 298
Query: 309 VGSTDLLFEHYAWLARQYSAFGELFDEAIRAGLPAIQSQ--------------HPGFYYQ 354
VGS ++ F H+ W +RQ+ FGEL E +P S P +YYQ
Sbjct: 299 VGSPEVAFLHWEWFSRQFLVFGELI-ETTSTTVPDTLSPRFGTADNALTEWEFQPAYYYQ 357
Query: 355 HAAQFTVKRRQAMRSLCAEALQYPPAPDPLDGILE--YYGQ--RPWRPGRLSADPHDPQK 410
AA + ++R A+ + + ++ Y GQ R + G A
Sbjct: 358 LAANYLREKRYALEFSSSSVSLTKGVNGLPESVMPSVYVGQYVRLFEQGDTVAVLPLSDT 417
Query: 411 EQAAILALQYNERIFNHSTIIISFLGSAISQFKSFHSPRMRKQLVVEMANEYFYSADYGK 470
E + AL ER F S II+ A F+S + RM MA EY+ + D+
Sbjct: 418 EYTS-YALSEAER-FQDSYEIIALFRKAYESFRSLGATRMASACSGGMAIEYYAAGDFSN 475
Query: 471 ALTLLTHMLWDYRREKWWYLASHVLNRALQCAYLAAKIQDYLQLSIE 517
A L + YR+E W L L +CA ++D++ S+E
Sbjct: 476 AKQLFDGVAGLYRQEGWATLLWENLGYLRECARKLKSLKDFISYSLE 522
Score = 34.3 bits (75), Expect = 0.55
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 961 ITWRRKSNL---HGLCVMSSTALSGLPIDQCPVSVKVDYP--AVIELLTSVPLKCILKGN 1015
++W R S++ V+ L + I++ P+ V ++ P A++ + + +K +
Sbjct: 1023 LSWSRDSSIGESQDSRVIMKERLPEVHIEEPPLVVTMECPPYAILGIPFTFHVKIYNSTS 1082
Query: 1016 TNTPIRLSLVVKWTDDYIFSGYKKLSVMVPPKGQVELKYNIRPLFAGNTMPPRITATVI 1074
I+ SLV + +++FSG + + PK + + + + PL +G+ PRIT T +
Sbjct: 1083 LLQEIKYSLVD--SQNFVFSGAHNHAASILPKTEHIVSHKLVPLGSGSQQLPRITITSV 1139
>01_06_1289 -
36010924-36011001,36011441-36011518,36012321-36012421,
36012506-36012603,36016213-36016315,36016435-36016486
Length = 169
Score = 37.5 bits (83), Expect = 0.059
Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 2/112 (1%)
Query: 883 VDDPFIVMPQIKILSPWDLLIIDTELEVVDSFKNTDKTKPISCIRNLEVAEKNIASDA-I 941
VDD + Q+ I+ P D L + SF P + E+ N+ D +
Sbjct: 32 VDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRV 91
Query: 942 CIQAKYNPKDNPTRVGLYNITWRRKSNLHGLCVMSSTALSGLPIDQCPVSVK 993
CI + P D+P L + W + + + + LSG P D+ P +++
Sbjct: 92 CISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSG-PNDESPANIE 142
>07_03_0627 - 20061951-20062391,20062912-20062960,20063386-20063851,
20063933-20064139,20064267-20064405,20065146-20065282,
20065414-20065657,20065808-20065969,20066049-20066167,
20066240-20066314,20066327-20066500,20066607-20066769,
20067211-20067420,20067515-20067668,20067761-20067839,
20067999-20068146,20068501-20068671,20068771-20069385
Length = 1250
Score = 34.3 bits (75), Expect = 0.55
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 96 IPAVIVIFYDMDWNDTQWNEKIIECASKVQSIRAAVEGHATRVAVVVIQSRQSPPPSE 153
+PA + D+ W W E+II C+ K V+ A VI S PP S+
Sbjct: 1091 VPAAHMTPEDVRWMVGAWRERIIVCSGKYGLAHGLVKAFMDSGAKAVISSAMEPPDSQ 1148
>01_07_0160 -
41563109-41563468,41563566-41563985,41564082-41564263,
41564362-41564542,41565066-41565084,41565185-41565445,
41566140-41566253,41566264-41566331,41566890-41567018,
41567141-41567245,41567317-41567456,41567519-41567687,
41567824-41567900,41568133-41568187,41568660-41568705,
41568806-41568894,41568996-41569061,41569360-41569425,
41569817-41569906,41570009-41570026
Length = 884
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/78 (21%), Positives = 37/78 (47%)
Query: 855 TCKITVIKPFEVTSAFVSTDFSPISKCFVDDPFIVMPQIKILSPWDLLIIDTELEVVDSF 914
T I + V+ F+ T F+ + + D ++ ++S + L+ DT +++
Sbjct: 570 TILIPAVAKERVSPEFIFTHFNAENGAGIHDKAYILAAGLLMSQYSLIGYDTSAHIIEET 629
Query: 915 KNTDKTKPISCIRNLEVA 932
KN D + PI I ++ ++
Sbjct: 630 KNADWSGPIGIITSVALS 647
>07_03_0067 + 13018729-13019187,13019197-13019901
Length = 387
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 79 IPKGILKKNWIHKRVSLIPA----VIVIFYDMDWNDTQWNEKIIECASKVQS 126
IP GI K + K VS PA +++ YD W D +W+ + + A+ Q+
Sbjct: 121 IPVGIKNKAAVDKLVSKFPAEEFALMLFHYDGAWGDLEWHGRAVHVAAAGQT 172
>06_01_0209 +
1587656-1587876,1587964-1588055,1590520-1590545,
1591130-1591370,1591459-1591554,1591639-1591754,
1591837-1591917,1592597-1592720,1593222-1593271,
1593735-1593825,1594386-1594421,1594502-1594602,
1594684-1594800
Length = 463
Score = 31.5 bits (68), Expect = 3.9
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 504 LAAKIQDYLQLSIEALSKNIQVPN----NDKDRIFRNIMSVIHLNIPAPEPDLPSSSQSK 559
+A K++ Y +L+ E + K ++ +D +RN + V+ A PD SSS+
Sbjct: 18 VAVKLRGYFELAKEEIDKAVRAEEWGLPDDAAAHYRNALRVMLEAKAARVPDAVSSSERG 77
Query: 560 AVELWQSMIEKEPLQV 575
V ++Q I K QV
Sbjct: 78 QVRVYQEKIAKWQTQV 93
>08_02_0089 + 12241337-12241975
Length = 212
Score = 30.7 bits (66), Expect = 6.8
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 153 EYMLGAERAQALCAACEIQSKSLFVLPHGDHLMGYIVRLENAFYDIAQNY 202
EY +G + A +C +++++ L GD L G +V L+ +D NY
Sbjct: 119 EYGVGGDAAPFVCLGGFRNTRAVYQLEEGDTL-GLVVELDETRFDFGTNY 167
>07_03_1287 +
25510813-25510862,25511326-25511504,25511715-25512037,
25512160-25513950
Length = 780
Score = 30.7 bits (66), Expect = 6.8
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 219 KTTHQYLFVRHQFKLGYLNELKQDINTAHKHYVHAYNNLLETRTVDTNLHEVRTVAGYIN 278
KT + RH+ + LN +K+++ T H+ YV N E T EV +V I
Sbjct: 272 KTQIEVAKERHEKAIAELNSVKEELKTVHEQYVTLIN---ERDTAIKRSEEVISVGKDIE 328
Query: 279 YKLCKILFALNLPRDAISQL-KSHIEKYKSRVGS 311
++ ++ L + ++ +H E + R+G+
Sbjct: 329 KRVEELTLELIASKGSLELAHAAHHEAEERRIGA 362
>02_01_0679 - 5048653-5051394
Length = 913
Score = 30.7 bits (66), Expect = 6.8
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 184 LMGYIVRLENAFY---DIAQNYYHHEAKNIKQHRDHLNKTTHQYL----FVRHQFKLGYL 236
L G+IVR+ Y DI Y ++ A +H +H + H++ F R +L +
Sbjct: 67 LEGWIVRVRKVAYRVEDITDEYSYNIA---LEHENHFKRLIHKFFYPTAFHRIAIELKDI 123
Query: 237 NELKQDINTAHKHYVHAYNNLLETRTVDTNLH 268
E + ++ + Y +N LL+ + ++H
Sbjct: 124 EEEIKHLSQLKRDYREMFNELLDNTSDSAHIH 155
>10_08_0445 + 17989438-17990895
Length = 485
Score = 30.3 bits (65), Expect = 8.9
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 354 QHAAQFTVKRRQAMRSLCAEALQYPPAPDPLDGILEYYGQRPWRP-GRLSADPHDPQKEQ 412
+ AA V RR+ +S A + PP+P P +RPWR L A P+D +
Sbjct: 391 ERAAAAAVARREIRKSATATNMTPPPSP-PHVRAPPAPARRPWRTRDVLPAMPNDELMRR 449
Query: 413 AAILALQYNERI 424
A L +++E++
Sbjct: 450 AESLIRRHHEQL 461
>05_02_0073 +
6336649-6336710,6336846-6336894,6338079-6338468,
6338677-6338902,6338983-6339270,6339594-6339967,
6340044-6340736
Length = 693
Score = 30.3 bits (65), Expect = 8.9
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 483 RREKWWYLASHVLNRALQCAYLAAKIQDYLQLSIEALSKNIQ 524
R+E +W LAS++ +R L C + +++ L + + + N++
Sbjct: 112 RKEVFWKLASNLRDRGLLCDTIHVSVEEQLAMFLHTVGHNLR 153
>01_06_1820 +
40120861-40120863,40122484-40122612,40122710-40122895,
40123679-40123867,40124229-40124563,40124977-40125400
Length = 421
Score = 30.3 bits (65), Expect = 8.9
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 79 IPKGILKKNWIHKRVSLIPA----VIVIFYD--MD-WNDTQWNEKIIECASKVQS 126
IP GI +K + K VS P V++ YD MD W + W+++ I A+K Q+
Sbjct: 153 IPVGIKQKAVVDKLVSKFPGDRFTVMLFHYDGEMDGWRELGWSDRAIHVAAKDQT 207
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.134 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,682,515
Number of Sequences: 37544
Number of extensions: 1325978
Number of successful extensions: 2992
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2982
Number of HSP's gapped (non-prelim): 15
length of query: 1103
length of database: 14,793,348
effective HSP length: 90
effective length of query: 1013
effective length of database: 11,414,388
effective search space: 11562775044
effective search space used: 11562775044
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)
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