GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000187-TA|BGIBMGA000187-PA|IPR002345|Lipocalin
         (1103 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    29   0.16 
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    29   0.16 
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    27   0.64 
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    27   0.64 
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    26   1.5  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    26   1.5  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    26   1.5  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    26   1.9  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    24   5.9  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    24   5.9  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    24   5.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    24   5.9  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    24   7.8  

>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 29.5 bits (63), Expect = 0.16
 Identities = 15/57 (26%), Positives = 29/57 (50%)

Query: 516 IEALSKNIQVPNNDKDRIFRNIMSVIHLNIPAPEPDLPSSSQSKAVELWQSMIEKEP 572
           I +LS N    NN   +++ NI+++  + +P P P    +   + +  W S+ E+ P
Sbjct: 315 ISSLSNNTIHNNNYNKKLYYNIINIEQIPVPVPVPIHCGNFPPRPMGPWISIQEQVP 371


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 29.5 bits (63), Expect = 0.16
 Identities = 13/46 (28%), Positives = 25/46 (54%)

Query: 527 NNDKDRIFRNIMSVIHLNIPAPEPDLPSSSQSKAVELWQSMIEKEP 572
           NN+  +++ NI  +  + +P P P    +   +++E W SM E+ P
Sbjct: 345 NNNYKKLYYNINYIEQIPVPVPVPIYCGNFPPRSMEPWISMQEQIP 390


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 27.5 bits (58), Expect = 0.64
 Identities = 12/46 (26%), Positives = 24/46 (52%)

Query: 527 NNDKDRIFRNIMSVIHLNIPAPEPDLPSSSQSKAVELWQSMIEKEP 572
           NN   +++ NI+++  + +P P P    +   + +  W SM E+ P
Sbjct: 106 NNYNKKLYYNIINIEQIPVPVPVPVYCGNFPPRPMGPWISMQEQIP 151


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 27.5 bits (58), Expect = 0.64
 Identities = 12/46 (26%), Positives = 24/46 (52%)

Query: 527 NNDKDRIFRNIMSVIHLNIPAPEPDLPSSSQSKAVELWQSMIEKEP 572
           NN   +++ NI+++  + +P P P    +   + +  W SM E+ P
Sbjct: 106 NNYNKKLYYNIINIEQIPVPVPVPVYCGNFPPRPMGPWISMQEQIP 151


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 13/46 (28%), Positives = 23/46 (50%)

Query: 527 NNDKDRIFRNIMSVIHLNIPAPEPDLPSSSQSKAVELWQSMIEKEP 572
           NN+  +++ NI  +  + IP P P    +   + +  W SM E+ P
Sbjct: 320 NNNYKKLYYNINYIEQIPIPVPVPIYCGNFPPRPMGPWISMQEQIP 365


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 14/59 (23%), Positives = 27/59 (45%)

Query: 514 LSIEALSKNIQVPNNDKDRIFRNIMSVIHLNIPAPEPDLPSSSQSKAVELWQSMIEKEP 572
           LS + +  N    N +  +++ NI  +  + +P P P    +   + +  W SM E+ P
Sbjct: 307 LSNKTIHNNNNYNNYNNKKLYYNINYIEQIPVPVPVPIYYGNFPPRPMGPWISMQEQIP 365


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 11/46 (23%), Positives = 25/46 (54%)

Query: 527 NNDKDRIFRNIMSVIHLNIPAPEPDLPSSSQSKAVELWQSMIEKEP 572
           NN+  +++ NI+++  + +P P P    +   + +  W S+ E+ P
Sbjct: 348 NNNCKKLYYNIINIEQIPVPVPVPIYCGNFPPRPMGPWISIQEQIP 393


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 12/46 (26%), Positives = 23/46 (50%)

Query: 527 NNDKDRIFRNIMSVIHLNIPAPEPDLPSSSQSKAVELWQSMIEKEP 572
           NN+  +++ NI  +  + +P P P    +  S+ +  W  M E+ P
Sbjct: 106 NNNCKKLYYNINYIEQIPVPVPVPIYCGNFPSRPMGPWVPMQEQIP 151


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 10/46 (21%), Positives = 24/46 (52%)

Query: 527 NNDKDRIFRNIMSVIHLNIPAPEPDLPSSSQSKAVELWQSMIEKEP 572
           N +  +++ NI+++  + +P P P    +   + +  W S+ E+ P
Sbjct: 317 NYNSKKLYYNIINIEQIPVPVPVPIYCGNFPPRPMGPWISIQEQIP 362


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 10/46 (21%), Positives = 24/46 (52%)

Query: 527 NNDKDRIFRNIMSVIHLNIPAPEPDLPSSSQSKAVELWQSMIEKEP 572
           N +  +++ NI+++  + +P P P    +   + +  W S+ E+ P
Sbjct: 328 NYNSKKLYYNIINIEQIPVPVPVPIYCGNFPPRPMGPWISIQEQIP 373


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 10/45 (22%), Positives = 24/45 (53%)

Query: 528 NDKDRIFRNIMSVIHLNIPAPEPDLPSSSQSKAVELWQSMIEKEP 572
           N+  +++ NI+++  + +P P P    +   + +  W S+ E+ P
Sbjct: 347 NNYKKLYYNIINIEQIPVPVPVPIYCGNFPPRPMGPWISIQEQIP 391


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 13/63 (20%), Positives = 27/63 (42%)

Query: 160 RAQALCAACEIQSKSLFVLPHGDHLMGYIVRLENAFYDIAQNYYHHEAKNIKQHRDHLNK 219
           R +A    CE +++    L +     G++        ++A+++YH E +      + L  
Sbjct: 113 RMRAPSFICENETRQGLTLHYRSKRRGFVYYTMGQIREVARHFYHKELQIELVREEILFD 172

Query: 220 TTH 222
           T H
Sbjct: 173 TVH 175


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 12/51 (23%), Positives = 23/51 (45%)

Query: 522 NIQVPNNDKDRIFRNIMSVIHLNIPAPEPDLPSSSQSKAVELWQSMIEKEP 572
           N    NN   +++ NI  +  + +P P P    +   + +  W S+ E+ P
Sbjct: 95  NYNNDNNYNKKLYYNINYIEQIPVPVPVPIYCGNFPPRPMGPWISIQEQIP 145


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.134    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 335,591
Number of Sequences: 429
Number of extensions: 15041
Number of successful extensions: 71
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53
Number of HSP's gapped (non-prelim): 18
length of query: 1103
length of database: 140,377
effective HSP length: 65
effective length of query: 1038
effective length of database: 112,492
effective search space: 116766696
effective search space used: 116766696
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)