Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000186-TA|BGIBMGA000186-PA|IPR000571|Zinc finger,
CCCH-type
(256 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09) 266 2e-71
SB_45794| Best HMM Match : zf-CCCH (HMM E-Value=3.1e-27) 36 0.025
SB_44697| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_34807| Best HMM Match : zf-CCCH (HMM E-Value=4.6e-07) 34 0.13
SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_23942| Best HMM Match : 5-nucleotidase (HMM E-Value=4) 32 0.40
SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0) 32 0.40
SB_28410| Best HMM Match : zf-CCCH (HMM E-Value=7.9e-05) 32 0.53
SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_3673| Best HMM Match : CT20 (HMM E-Value=1.9) 31 0.70
SB_282| Best HMM Match : zf-CCCH (HMM E-Value=2.4e-10) 31 0.70
SB_23697| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_46754| Best HMM Match : zf-C2H2 (HMM E-Value=1.5e-29) 31 1.2
SB_26965| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_50496| Best HMM Match : FHA (HMM E-Value=7.8e-07) 30 1.6
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 30 1.6
SB_45533| Best HMM Match : SAP (HMM E-Value=0.55) 30 1.6
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 30 1.6
SB_47269| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15) 30 2.1
SB_57515| Best HMM Match : CBFNT (HMM E-Value=3.3) 30 2.1
SB_36272| Best HMM Match : NinE (HMM E-Value=1.8) 30 2.1
SB_32414| Best HMM Match : Osteopontin (HMM E-Value=2.4) 30 2.1
SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_51943| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_39468| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_27837| Best HMM Match : Vicilin_N (HMM E-Value=0.85) 29 2.8
SB_49133| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_30230| Best HMM Match : CH (HMM E-Value=0.0035) 29 3.7
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_51870| Best HMM Match : TPR_2 (HMM E-Value=1.1e-10) 29 3.7
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5) 29 3.7
SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5) 29 4.9
SB_52084| Best HMM Match : Vicilin_N (HMM E-Value=1.7) 29 4.9
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 29 4.9
SB_23824| Best HMM Match : RRM_1 (HMM E-Value=1.9e-19) 29 4.9
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_21241| Best HMM Match : ErmC (HMM E-Value=1.1) 29 4.9
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_3878| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_49233| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_25911| Best HMM Match : Gal_Lectin (HMM E-Value=8.1e-37) 29 4.9
SB_25658| Best HMM Match : FYRC (HMM E-Value=0.18) 29 4.9
SB_22163| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_54706| Best HMM Match : Linker_histone (HMM E-Value=0.014) 28 6.5
SB_36761| Best HMM Match : DUF1279 (HMM E-Value=0.23) 28 6.5
SB_36254| Best HMM Match : Filament (HMM E-Value=0.21) 28 6.5
SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 28 6.5
SB_25569| Best HMM Match : DUF600 (HMM E-Value=1.3) 28 6.5
SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_20440| Best HMM Match : SRP-alpha_N (HMM E-Value=1.4) 28 6.5
SB_18819| Best HMM Match : DUF822 (HMM E-Value=0.3) 28 6.5
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7) 28 6.5
SB_35674| Best HMM Match : SH2 (HMM E-Value=0) 28 6.5
SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 6.5
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 28 6.5
SB_27422| Best HMM Match : Dynamin_N (HMM E-Value=3) 28 6.5
SB_24458| Best HMM Match : P60 (HMM E-Value=0.00014) 28 6.5
SB_21591| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94) 28 6.5
SB_5625| Best HMM Match : DBR1 (HMM E-Value=1.1e-26) 28 6.5
SB_5549| Best HMM Match : PT (HMM E-Value=1.9) 28 6.5
SB_51770| Best HMM Match : Gal_Lectin (HMM E-Value=6.8e-23) 28 8.6
SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07) 28 8.6
SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6) 28 8.6
SB_34153| Best HMM Match : DUF972 (HMM E-Value=0.17) 28 8.6
SB_25098| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_23089| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07) 28 8.6
SB_5078| Best HMM Match : Gal_Lectin (HMM E-Value=6.8e-23) 28 8.6
SB_33706| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_24403| Best HMM Match : BRF1 (HMM E-Value=1.2) 28 8.6
SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09) 28 8.6
SB_14909| Best HMM Match : Spb1_C (HMM E-Value=0) 28 8.6
SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08) 28 8.6
>SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09)
Length = 321
Score = 266 bits (651), Expect = 2e-71
Identities = 129/220 (58%), Positives = 158/220 (71%), Gaps = 7/220 (3%)
Query: 41 QQVVLPTKRVNKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATA 100
Q VV+ ++ NP IQ T G K K +D ++ + S R+ +S ATA
Sbjct: 43 QTVVIRKEKKTGFNPMIQKTEGFAKEKG---QDEEEKIHVDFKSTRSAMSAGPTDAGATA 99
Query: 101 TYELDTEKDRDAQAIFEKAQKINEEL-HGQADDKIYRGINNYAQYYKKKDTAAGNASSGL 159
TYELDT+ DRDAQA++EK ++N+EL + D+K+Y+G+NNY Q+Y+K+DTA GNA+SG+
Sbjct: 100 TYELDTDFDRDAQALYEKKLQVNKELMEKEVDEKVYKGLNNYMQFYEKRDTAQGNAASGM 159
Query: 160 VRKGPIRAPANLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQLERE-E 218
VR+GPIRAP NLRAT+RWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQLERE E
Sbjct: 160 VRQGPIRAPKNLRATIRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQLEREWE 219
Query: 219 LETPGQDGDSDYEIHSDEE--LPFKCFVCREGFTNPVVTK 256
P YEI SD E LPF C +CR+ F NPVVTK
Sbjct: 220 HGKPDSADPHQYEIDSDNEDNLPFACIMCRKTFKNPVVTK 259
>SB_45794| Best HMM Match : zf-CCCH (HMM E-Value=3.1e-27)
Length = 527
Score = 36.3 bits (80), Expect = 0.025
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 179 YQPDICKDYKETGFCGFGDSCKFLH 203
Y+ ++C+ ++E+G C +GD C+F H
Sbjct: 155 YKTELCRPFEESGTCKYGDKCQFAH 179
Score = 34.3 bits (75), Expect = 0.099
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 129 QADDKIYRGINNYAQYYKKKDTAAGNASSGLVRKGPIRAPAN----LRATVRWD-YQPDI 183
Q +D RG N ++Y K + SG + G A+ LR R Y+ ++
Sbjct: 140 QTEDDRRRGSQNSSRY--KTELCRPFEESGTCKYGDKCQFAHGYHELRQLARHPKYKTEL 197
Query: 184 CKDYKETGFCGFGDSCKFLHDRSD 207
C+ + GFC +G C F+H+ +
Sbjct: 198 CRTFHTIGFCPYGPRCHFIHNADE 221
>SB_44697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 177 WDYQPDI-CKDYKET-GFCGFGDSCKFLHD-RSDYKHGWQLEREELETPGQDGDS-DYEI 232
++Y PD+ C Y ET G C GD C +LH D + + L + T + DS Y +
Sbjct: 83 FNYSPDVYCTQYDETTGICPSGDDCPYLHRVAGDVERRYHLRYYKTATCVYETDSRGYCV 142
Query: 233 HSDEEL 238
++E +
Sbjct: 143 KNEESV 148
>SB_34807| Best HMM Match : zf-CCCH (HMM E-Value=4.6e-07)
Length = 505
Score = 33.9 bits (74), Expect = 0.13
Identities = 9/24 (37%), Positives = 17/24 (70%)
Query: 180 QPDICKDYKETGFCGFGDSCKFLH 203
+P +C+ + G+C +GD C+F+H
Sbjct: 14 KPTLCRYFSANGYCFYGDQCQFVH 37
>SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1888
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/56 (30%), Positives = 24/56 (42%)
Query: 56 NIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRD 111
N ++ K S D DND ++D + TS T S + T + DT D D
Sbjct: 99 NDTTSDNDKTSDNDTTSDNDTTSDNDTTSDNNTTSYNDPTSDNDTTSDNDTTSDND 154
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/56 (30%), Positives = 24/56 (42%)
Query: 56 NIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRD 111
N ++T + D DND ++D TS T S + N T + DT D D
Sbjct: 177 NDKTTDNDTTTDNDTTSDNDTTSDNNTTSYNDTTSDNNKTSNNNTTSDNDTTSDND 232
Score = 31.5 bits (68), Expect = 0.70
Identities = 18/61 (29%), Positives = 25/61 (40%)
Query: 51 NKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDR 110
N + N ++ S D DND ++D E TS T S + T + DT D
Sbjct: 58 NTTSDNNTTSDNDTTSDNDTTSDNDTTSDNETTSDNDTNSDNDTTSDNDKTSDNDTTSDN 117
Query: 111 D 111
D
Sbjct: 118 D 118
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/61 (29%), Positives = 25/61 (40%)
Query: 51 NKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDR 110
N + N ++ S D DND ++D E TS T S + T + DT D
Sbjct: 130 NTTSYNDPTSDNDTTSDNDTTSDNDTTSDNETTSDNDTNSDNDTTSDNDKTTDNDTTTDN 189
Query: 111 D 111
D
Sbjct: 190 D 190
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/56 (28%), Positives = 22/56 (39%)
Query: 56 NIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRD 111
N +T K + D DND + D + TS T + + T DT D D
Sbjct: 237 NDTTTDNNKTTDNDTTSDNDTTTDNDTTSDNDTTTNNDTNSDNDTTTSNDTTSDND 292
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 69 DVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRD 111
D +ND ++D + TS T S N AT + DT D D
Sbjct: 316 DTTTNNDTTSDNDATSDNDTTSDNDTTTNNDATSDNDTTTDND 358
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/64 (26%), Positives = 26/64 (40%)
Query: 51 NKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDR 110
NK + N ++ S D DND + D KT+ T S + T + DT +
Sbjct: 214 NKTSNNNTTSDNDTTSDNDTTFDNDTTTDNNKTTDNDTTSDNDTTTDNDTTSDNDTTTNN 273
Query: 111 DAQA 114
D +
Sbjct: 274 DTNS 277
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 56 NIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRD 111
N ++T S D DND ++D + T+ T S + T + DT D D
Sbjct: 243 NNKTTDNDTTSDNDTTTDNDTTSDNDTTTNNDTNSDNDTTTSNDTTSDNDTTSDND 298
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 69 DVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDA 112
D DND ++D + T+ T S + T DT D DA
Sbjct: 286 DTTSDNDTTSDNDTTTNNDTTSDNDATSDNDTTTNNDTTSDNDA 329
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/56 (26%), Positives = 23/56 (41%)
Query: 56 NIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRD 111
N ++ K + D DND ++D + TS T S + T +T D D
Sbjct: 171 NDTTSDNDKTTDNDTTTDNDTTSDNDTTSDNNTTSYNDTTSDNNKTSNNNTTSDND 226
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 51 NKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDR 110
+K + N ++ S D DND ++D + T+ T S + T + +T D
Sbjct: 10 DKASDNDTTSDNNTTSDNDTTSDNDTTSDNDTTADNNTTSDNDTTADNNTTSDNNTTSDN 69
Query: 111 D 111
D
Sbjct: 70 D 70
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/61 (24%), Positives = 25/61 (40%)
Query: 51 NKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDR 110
N + N ++ S D DN+ ++D + S T S + + T + DT D
Sbjct: 64 NTTSDNDTTSDNDTTSDNDTTSDNETTSDNDTNSDNDTTSDNDKTSDNDTTSDNDTTSDN 123
Query: 111 D 111
D
Sbjct: 124 D 124
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/57 (28%), Positives = 23/57 (40%)
Query: 56 NIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDA 112
N +T S D +ND ++D + T+ T S + T DT D DA
Sbjct: 255 NDTTTDNDTTSDNDTTTNNDTNSDNDTTTSNDTTSDNDTTSDNDTTTNNDTTSDNDA 311
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/61 (24%), Positives = 25/61 (40%)
Query: 51 NKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDR 110
N + N ++ S D DN+ ++D + T+ T S + T + DT D
Sbjct: 22 NTTSDNDTTSDNDTTSDNDTTADNNTTSDNDTTADNNTTSDNNTTSDNDTTSDNDTTSDN 81
Query: 111 D 111
D
Sbjct: 82 D 82
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 47 TKRVNKPNPNIQSTG-GPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELD 105
T N P + +T S D DN+ ++D + S T S + + T + D
Sbjct: 131 TTSYNDPTSDNDTTSDNDTTSDNDTTSDNETTSDNDTNSDNDTTSDNDKTTDNDTTTDND 190
Query: 106 TEKDRD 111
T D D
Sbjct: 191 TTSDND 196
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 69 DVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRD 111
D +ND ++D + TS T + + AT + DT D D
Sbjct: 298 DTTTNNDTTSDNDATSDNDTTTNNDTTSDNDATSDNDTTSDND 340
>SB_23942| Best HMM Match : 5-nucleotidase (HMM E-Value=4)
Length = 735
Score = 32.3 bits (70), Expect = 0.40
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 46 PTKRVNKPN-PNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATY 102
P KR+ P+ P+ +S KK + + ED++D +D E+ S + + E+ TY
Sbjct: 677 PLKRLPPPHEPHFESVTPAKKPRCESEEDDEDKHDLEQRSVDDDIELSNPTEHLRETY 734
>SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1080
Score = 32.3 bits (70), Expect = 0.40
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 215 EREELETPGQDGDSDYEIHSDEELPFKCFVCREGFTN 251
E E+ E DG +Y + DE+ P +C VC+E FT+
Sbjct: 654 EDEDAEEGADDGYDEY--YYDEDEPLQCEVCKEEFTS 688
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/86 (23%), Positives = 36/86 (41%)
Query: 46 PTKRVNKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELD 105
P KR KP + T K K + D +E K ++ ++ + + + +
Sbjct: 528 PRKRGRKPKSEKKDTEEGNKEKEKGDDKAKDKTEESKDGEKKEEIGDKKSDKEESAEKNE 587
Query: 106 TEKDRDAQAIFEKAQKINEELHGQAD 131
+EKD D +K K +E+ G+ D
Sbjct: 588 SEKDDDDGKEDDKGDKDDEDGGGEKD 613
>SB_28410| Best HMM Match : zf-CCCH (HMM E-Value=7.9e-05)
Length = 905
Score = 31.9 bits (69), Expect = 0.53
Identities = 39/163 (23%), Positives = 60/163 (36%), Gaps = 26/163 (15%)
Query: 51 NKPNPN-IQSTGGPKKSKIDVIEDN-----DDSNDEEKTSQRTTLSVQQ----QRENATA 100
NKPN N I +++ D+ DN +D N ++ S+ +L + Q T
Sbjct: 128 NKPNRNSIPVDRRKRRADEDIRTDNHKIAKEDLNTKQNDSENASLDIDNKGRPQPIPTTR 187
Query: 101 TYELDTEKDRDAQAIFEKAQKINEELHGQADDKIYRGINNYAQYYKKKDTAAGNASSGLV 160
D ++DR F ++ G D+I RG + T
Sbjct: 188 EGNRDWDRDRRYPRDFSRSDDDGRTRRGPVWDRIGRGRDR-----DNNRTGRSRGHRDRY 242
Query: 161 RKGPIRAPANLRATVRWDYQPDICKDYKETGFCGFGDSCKFLH 203
++G A R C+DY+E GFC G+ C F H
Sbjct: 243 QEGRFSREAKNR-----------CRDYEEKGFCIRGELCPFDH 274
>SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1106
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/83 (21%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 44 VLPTKRVNKPNPNIQSTGGPKKSKIDVIEDND-DSNDEEKTSQRTTLSVQQQRENATATY 102
+LP++ P P+ + P +S++D E + D+EK + L +++R+
Sbjct: 953 ILPSEAAAPPLPDTRPGASPTQSEVDAEESKKREKKDKEKEKRERELQRKKERDEQKRKK 1012
Query: 103 ELDTEKDRDAQAIFEKAQKINEE 125
E + +++R+ + E+ +K E+
Sbjct: 1013 E-EEKREREEKKRKEEERKRREK 1034
>SB_3673| Best HMM Match : CT20 (HMM E-Value=1.9)
Length = 183
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 54 NPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATY 102
NP + PKK + + +ED++D +D E+ S + E+ TY
Sbjct: 134 NPTLSWYRHPKKPRCESVEDDEDKHDLERPSVADDTEIPYPTEHLRETY 182
>SB_282| Best HMM Match : zf-CCCH (HMM E-Value=2.4e-10)
Length = 508
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 183 ICKDYKETGFCGFGDSCKFLHDRSDYKHGWQLER 216
+C+ Y + G C FG+ C+F+H K + ER
Sbjct: 42 VCRFYAKKGNCRFGEKCRFVHKEIISKEDDKSER 75
>SB_23697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 31.1 bits (67), Expect = 0.93
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 57 IQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIF 116
+ T K S ID+ +N D +E++ + + + + +++Y D D + +
Sbjct: 114 VMDTSLKKISFIDLSRNNSDEEEEKENTNQEEEEGENSNSSWSSSYATSGGYDSDGEGVQ 173
Query: 117 EKAQKINEEL 126
EK +KI + L
Sbjct: 174 EKRRKIKKIL 183
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 47 TKRVNKPNPNIQSTGGP-KKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELD 105
+K VN+ +Q T +++K +V E ++ +K Q T VQ+ ++ T
Sbjct: 1290 SKEVNETKKEVQETKKDVQETKKEVDETKTKVDETKKEVQETKKDVQETKKEVQETKTKV 1349
Query: 106 TEKDRDAQAIFEKAQKINEELH 127
E +++ Q ++ Q+ +++H
Sbjct: 1350 DETNKEVQETKKEIQETKKDVH 1371
>SB_46754| Best HMM Match : zf-C2H2 (HMM E-Value=1.5e-29)
Length = 487
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 229 DYEIHSDEELPFKCFVCREGFTNP 252
D+E ELPFKC VC + F +P
Sbjct: 101 DHENRHTGELPFKCVVCGKAFISP 124
>SB_26965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 827
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 60 TGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYE-LDT 106
T G + K+ V+E +D S DEE+ + T+ + + ATY+ +DT
Sbjct: 81 TDGEEAEKVVVVE-SDTSEDEEEEEEEETMESYNELDEPQATYDVIDT 127
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 48 KRVNKPNPNIQSTGGPKKSKIDVI-EDNDDSNDEEKTSQRTTLSVQQQRENATATYELDT 106
K+ K +++ G + + V ED+D+ N E+K ++ LS+++ +E T E+DT
Sbjct: 1211 KKHKKQKEKQKTSDGSESDEAPVPREDDDNENLEKKLREKALLSMRKHKEPNTEEDEMDT 1270
>SB_50496| Best HMM Match : FHA (HMM E-Value=7.8e-07)
Length = 766
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 43 VVLPTKRVNKPNPNI-QSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATAT 101
V L + V++ N+ Q K++++ +E + DE T QR ++++Q + T
Sbjct: 257 VELEVEGVDELKNNVSQLIAKHKEAEVRRMEVERNYRDEIDTKQREIEAMKEQMQQIRQT 316
Query: 102 YELDTEKDR-DAQAIFEKAQKINEELHGQADDKI 134
+E + E R D Q + + K NE+ + D +I
Sbjct: 317 HEENAENVRHDLQGVQQGMVKRNEQENKHIDGQI 350
>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
Length = 430
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 81 EKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELHGQADD-KIYRGIN 139
E+ +R TLS + Q+ A YE + R + ++ Q E L Q + K I
Sbjct: 115 EQEEKRKTLSAETQQHQQRAQYEDQLARKRYNDQLGQQRQMQEENLRKQEESVKRQEAIR 174
Query: 140 NYAQYYKKK 148
YA + K+
Sbjct: 175 RYAMFASKR 183
>SB_45533| Best HMM Match : SAP (HMM E-Value=0.55)
Length = 371
Score = 30.3 bits (65), Expect = 1.6
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 76 DSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKA---QKINEELHGQADD 132
D NDE+K ++ +++RE A E ++ F+ A Q+I E G+ +D
Sbjct: 75 DVNDEKKITEWVAKQAEREREAARRKQEKMEKRRSLPNHNFDDASYTQQIQENA-GKIED 133
Query: 133 KIYRGINNYAQYYKKKDTAAGNASSGLVRKGPIRAPANLRATVRWDYQPDICKDYKE 189
+ +G+ K + +S+G R GP + PA + V W D+ + +E
Sbjct: 134 ALKQGL-------KASTSEPSTSSAGSKRTGPSKGPATKKKKV-WLGMDDLEDESEE 182
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 64 KKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATAT--YELDTEKDRDAQAIFEKAQK 121
+K I+V++ S D + LS + EN AT + + EK+ + + + EK +K
Sbjct: 1897 EKQDIEVLKVKLGSMDRKNKELADELSKSKNLENGKATEMVKKNEEKNNEIEEMREKMRK 1956
Query: 122 INEEL 126
NEE+
Sbjct: 1957 ANEEI 1961
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 30.3 bits (65), Expect = 1.6
Identities = 9/40 (22%), Positives = 24/40 (60%)
Query: 48 KRVNKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRT 87
+ K N + Q+ PK+ +++++D D N++++ ++T
Sbjct: 717 RHAGKDNEHHQNNYDPKRKDVNIVDDEDKFNNDDENHEKT 756
>SB_47269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 720
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Query: 181 PDICKDYKETGFCGFGDSCKFLH 203
PDICK Y C D C FLH
Sbjct: 164 PDICKFYNNAIGCSKKDKCPFLH 186
>SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15)
Length = 924
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 61 GGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKA 119
GG K++ + +N DSN+ + + L +E+ T + E+ EK + + EKA
Sbjct: 216 GGEKENTDEGRTENRDSNENKSPTSEKRLFDSSYKESPTQSEEIKDEKSSKDKPLEEKA 274
>SB_57515| Best HMM Match : CBFNT (HMM E-Value=3.3)
Length = 213
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 63 PKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDT-EKDRDAQAIFEKAQK 121
PK+ KI I D E+ + +S Q E+ +A+ E E+D + + FE++ K
Sbjct: 61 PKRRKISGIFKKGDGKKEKTEDKSKRISTVSQDESISASKEQQANEEDAEVKEDFEESPK 120
Query: 122 INEE 125
EE
Sbjct: 121 EVEE 124
>SB_36272| Best HMM Match : NinE (HMM E-Value=1.8)
Length = 393
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 67 KIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRD 111
K+++IED S++ +R +QQ+ A +T LD E R+
Sbjct: 8 KLNIIEDKKHSSERNLIQRRDAFLRRQQKRRAYSTGYLDQESPRE 52
>SB_32414| Best HMM Match : Osteopontin (HMM E-Value=2.4)
Length = 777
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 6/87 (6%)
Query: 46 PTKRVNKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELD 105
P + +P P + +SK DN++ DEEK + S++ + E + E D
Sbjct: 411 PEPKGRRP-PRVGRRSQRHRSKSLNSTDNENEADEEKEEDTKSESIEAESEKTSEKDEED 469
Query: 106 TEKDRDAQAIFEKAQKINEELHGQADD 132
E I EK +EE ADD
Sbjct: 470 IE-----STISEKKDSDDEEEQESADD 491
>SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 64 KKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKIN 123
+K ++ +ED DD+ D+ K + + S+ ++R + A E D +RD Q E+ ++I
Sbjct: 365 RKHLLEFLEDYDDNRDDPKYYKSS--SMNRRRRDREAEMESD---ERDRQRELEEIEEIR 419
Query: 124 EEL 126
+ L
Sbjct: 420 KRL 422
>SB_51943| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/89 (20%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 63 PKKSKIDVIEDN---DDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKA 119
P +K+ +++ N +D+ D++ +R ++ + +NA E + +KDR ++ +
Sbjct: 107 PSVNKLTLLKANKDLEDTTDDKTLEEREHAALLKSEKNALMKMETEGKKDRKSKGFKQVE 166
Query: 120 QKINEELHGQADDKIYRGINNYAQYYKKK 148
Q N + G + +I + + +KK
Sbjct: 167 QNGNGIMEGGLEMEIDQSSGRRRKNRRKK 195
>SB_39468| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1778
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/83 (20%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 50 VNKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKD 109
V+ PNPN QS + + D+N + + ++ Q +NA+ +Y+ + +
Sbjct: 202 VSPPNPN-QSYQDNSQLDQAASQPFQDANQSNRDTNQSYQEDNQSNQNASQSYQEANQSN 260
Query: 110 RDAQAIFEKAQKINEELHGQADD 132
++A +++A + N + + D
Sbjct: 261 QNAIQSYQEANQSNRDSNQSNQD 283
>SB_27837| Best HMM Match : Vicilin_N (HMM E-Value=0.85)
Length = 206
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 107 EKDRDAQAIFEKAQKINEELHGQADDKIYRGINNYAQYYKKKDTAAGNASSGLVRK 162
EK R + FEK +K+ E+ + ++KI I+ + K T N S+G R+
Sbjct: 142 EKRRKEKEEFEKQRKLKEDKQKEIEEKINEWIDKKNKEILKMPTLKVNESTGEYRR 197
>SB_49133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1331
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 182 DICKDYKETGFCGFGDSCKFLHDRSDY 208
DIC+++ +G C G++CK H Y
Sbjct: 922 DICREFMMSGECHRGENCKLRHPACRY 948
>SB_30230| Best HMM Match : CH (HMM E-Value=0.0035)
Length = 2440
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 76 DSNDEEKTSQRT----TLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINE 124
D N E+ QR T+S+ Q+ EN +L+ E++RD +A+ + + + +
Sbjct: 1540 DHNREQGIGQRKPIAFTVSMDQREENLVDVGKLNLEQERDGRAVTHELKNVTK 1592
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 67 KIDVIEDNDDSNDEEKTSQRT-TLSVQQQRENATATYELDTEKDRDAQAIFEKAQK 121
K D EDND SN+ + R L+ + Q T D ++D DA ++F+K ++
Sbjct: 638 KQDTTEDNDASNESSSHATRACCLNFEPQGGETPKT--SDPKQDVDATSVFKKTKE 691
>SB_51870| Best HMM Match : TPR_2 (HMM E-Value=1.1e-10)
Length = 279
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 101 TYELDTEKDRDAQAIFEKAQKINEELHGQADDKIYRGINNYAQYY 145
T+ L A +FE A +I EE+ G +DD+ +NN A+ Y
Sbjct: 153 TFLLTHGHAEQATEVFEHALEIAEEVLGPSDDQTLVVMNNLAKAY 197
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 220 ETPGQDGDSDYEIHSDEELPFKCFVCREGFTNPVVTK 256
E P D +H D E+PF+CF R+G T+ + +
Sbjct: 5404 ERPPSASDLITRLH-DIEVPFRCFYTRQGATSAIALR 5439
>SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5)
Length = 106
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 68 IDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELH 127
+DV + DD D +T++ T+ + Q+ + E+ + A E QK +EEL
Sbjct: 1 MDVEGERDDLQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLVAEVEHLQKSSEELQ 60
Query: 128 GQADD 132
Q D
Sbjct: 61 QQLTD 65
>SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 29.1 bits (62), Expect = 3.7
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
Query: 77 SNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFE-KAQKINEELHGQADDKIY 135
S+D EK S S + + + + + DTEKD D+ + + +E L + D+
Sbjct: 275 SDDSEKDSDDDEKSADTKNDEISDSDKSDTEKDADSDSENDGSGTSESEYLSSEESDEDV 334
Query: 136 RGINNYAQYYKK--------KDTAAGNASSGLVRKGPIRAPANLR 172
+ +Y +K +D A+ S L+ + +RA N R
Sbjct: 335 NEEFDLEKYIRKLERGTSSSEDDASSVTSEKLINRAVLRATKNFR 379
>SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5)
Length = 752
Score = 28.7 bits (61), Expect = 4.9
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 67 KIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEK-AQKINEE 125
K D E+ SND +S+R+ L Q + L+ + AQA + A++ E+
Sbjct: 491 KYDGEEELCSSNDISASSRRSKLRALQDHNKCLSVPPLNP---KTAQAFTKDFAERCREK 547
Query: 126 LHGQADDKIYRGINNYAQYYKKKDTAAGNASSGLVRKG 163
+ D Y IN+ ++K+ A +G VRKG
Sbjct: 548 TPDE--DVTYEEINSPVSPHQKQRRPKALAKAGRVRKG 583
>SB_52084| Best HMM Match : Vicilin_N (HMM E-Value=1.7)
Length = 520
Score = 28.7 bits (61), Expect = 4.9
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 67 KIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEK-AQKINEE 125
K D E+ SND +S+R+ L Q + L+ + AQA + A++ E+
Sbjct: 401 KYDGEEELCSSNDISASSRRSKLRALQDHNKCLSVPPLNP---KTAQAFTKDFAERCREK 457
Query: 126 LHGQADDKIYRGINNYAQYYKKKDTAAGNASSGLVRKG 163
+ D Y IN+ ++K+ A +G VRKG
Sbjct: 458 TPDE--DVTYEEINSPVSPHQKQRRPKALAKAGRVRKG 493
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 68 IDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELH 127
+DV + DD D +T++ T+ + Q+ + E+ + A ++ QK +EEL
Sbjct: 705 MDVEGERDDLQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLAAEVKQLQKSSEELQ 764
Query: 128 GQADD 132
Q D
Sbjct: 765 QQLTD 769
>SB_23824| Best HMM Match : RRM_1 (HMM E-Value=1.9e-19)
Length = 623
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 54 NPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDT 106
N N + T P K ED+D+S+D+ + + T ++Q ++ + T D+
Sbjct: 49 NSNEKETKVPPKKMAVKFEDSDESDDDVPMADKLTEDMEQNTDDNSNTVAKDS 101
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Query: 59 STGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEK 118
ST +K + N DS DEEK ++ +++R + E+ R+ + E+
Sbjct: 410 STTDEEKERKKSETKNKDSEDEEKERKKREAEEEEERRREEEERREEEERKREEE---ER 466
Query: 119 AQKINEELHGQADDKIYRGINNYAQYYKKKD 149
Q+ EE + +++ R Q K+++
Sbjct: 467 KQREEEEKKREEEERKQREEEERKQKEKEEE 497
>SB_21241| Best HMM Match : ErmC (HMM E-Value=1.1)
Length = 562
Score = 28.7 bits (61), Expect = 4.9
Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 5/131 (3%)
Query: 42 QVVLPTKRVNKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATAT 101
++V + + +P+ + T G K K + D SND +R ++++ +
Sbjct: 154 EIVWAQEVLGRPSDKSEKTQGKGKGKAKKTKQTDPSNDGMSLRERVQKTLRKHEKEKQGL 213
Query: 102 YELDTEKDRDAQAIFEKAQKINEELHGQADDKIYRGINNYAQYYKKKDTAAGNASSGLVR 161
E+ R+A E+ D +Y+ +N ++ T N + R
Sbjct: 214 QEVHFFSGREADLENNSDDPQTTEIKKLRKD-LYQCMNQLENLQNQRPTLLRNRDKRIKR 272
Query: 162 KGPIRAPANLR 172
RA NLR
Sbjct: 273 ----RAEDNLR 279
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/77 (22%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 64 KKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKIN 123
K+ + D E + DS D+ K ++ ++Q+ ++ D+E DR+ + +K+
Sbjct: 179 KEKQRDSSESSSDSEDDRKRRKKKVKKDKKQKAKDSSESLSDSEDDRE-----RRKKKVK 233
Query: 124 EELHGQADDKIYRGINN 140
+E+ +A D I++
Sbjct: 234 KEIKHKAKDSSESSIDS 250
>SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 48 KRVNKPNPNIQSTGGPKKSKIDVIEDNDDSNDEE---KTSQRTTLSVQQQRENATATYEL 104
K +N N N + + + EDND +N+++ KT+ T +N T +
Sbjct: 49 KHINDDNDNKTNNNDKDTNDDNTNEDNDKNNNDDNNNKTNDNDTNDENINDDNEKNTNDK 108
Query: 105 DTEKDRDAQAIFEKAQKINEELHGQADDK 133
+ D + + + N++ + DDK
Sbjct: 109 NNNDDSNENTNDDNDKNTNDDNDKKNDDK 137
>SB_3878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 72 EDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKIN--EELHGQ 129
+DND+ + EK ++RE+A E++ +D + + E+ + N EE+ +
Sbjct: 140 DDNDEVEEIEKREDANEKEEIEEREDANEKEEIEEREDDNEKEEIEEREDDNEKEEIDER 199
Query: 130 ADD 132
DD
Sbjct: 200 EDD 202
>SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 71 IEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEE 125
+E+ +EE+T R Q+RE A + + E+ RDA+ E +KI EE
Sbjct: 481 LEEQRRREEEERT--RREKEEAQRREEEEALMKREEEERRDAERKREAERKIREE 533
>SB_49233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Query: 182 DICKDYKETGFCGFGDSCKFLH 203
+IC+DY+ G C G CKF H
Sbjct: 36 NICRDYQR-GVCNRGGKCKFRH 56
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/86 (22%), Positives = 37/86 (43%)
Query: 49 RVNKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEK 108
R+ + N+ + KK + I+D +DS +EE+++++ + E E D
Sbjct: 961 RITEEEENVLALTEDKKKLLKEIQDLEDSLEEEESARQKLHLEKVSCEAKIKKLEEDLSL 1020
Query: 109 DRDAQAIFEKAQKINEELHGQADDKI 134
D + K +K EE + D +
Sbjct: 1021 VEDTNSKISKEKKTLEEKLNELDQAL 1046
>SB_25911| Best HMM Match : Gal_Lectin (HMM E-Value=8.1e-37)
Length = 413
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 55 PNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQ 94
P + T K I + ++DD NDE+ +R L + +
Sbjct: 42 PEVDETSKEMKEDIPTVVEDDDENDEDGDDRRRNLGLSNK 81
>SB_25658| Best HMM Match : FYRC (HMM E-Value=0.18)
Length = 211
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 70 VIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEE 125
V ED + + D E + + ++ RE T + T D D A K +K+N E
Sbjct: 146 VKEDQEQTEDSEDPEETAKKTEKKFREKQTPVLRMGTSSDADVVAF--KKRKLNSE 199
>SB_22163| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
Query: 73 DNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELHGQADD 132
D+DD E +T +TT + NA E DTEK D + I + H +
Sbjct: 226 DSDDDRSEYETIAKTTRIAEH---NARGKPESDTEKTADKTFTTSSERSIFKTRHQSRSE 282
Query: 133 KI--YRGINNYAQYYKKKDT-AAGNASSGL 159
+ N A+ +K+T A G++ G+
Sbjct: 283 SLTSKSRTQNIAESRPEKETRATGDSELGI 312
>SB_54706| Best HMM Match : Linker_histone (HMM E-Value=0.014)
Length = 323
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 49 RVNKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEK 108
++ N +Q+T ++ ++ N S + SQ+ + + Q+Q N+ A Y+L K
Sbjct: 139 QMQNTNSQMQNTNSQMQNTNSQMQ-NTISQKQSTNSQKQSTNSQKQNTNSEAKYKLAKAK 197
Query: 109 DRDAQAIFEKAQKINE 124
+ A A ++ A N+
Sbjct: 198 YKLANAKYKLANANNK 213
>SB_36761| Best HMM Match : DUF1279 (HMM E-Value=0.23)
Length = 244
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 86 RTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELHGQADD 132
RTT SV Q+R+ A + +KD ++ ++A++ NEE + D+
Sbjct: 5 RTTSSVMQERDRKAAEKRVQRQKDTQ-ESSRQEARERNEERLSEIDE 50
>SB_36254| Best HMM Match : Filament (HMM E-Value=0.21)
Length = 589
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Query: 76 DSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDA----QAIFEKAQKINEELHGQAD 131
DSN+ + S TTL Q+ EN +T K A QA ++ QK ++ + A+
Sbjct: 45 DSNEAKIASLETTLRRTQEHENQVRQELYNTHKRLTALEHEQASNKERQKSLQDAYQSAE 104
Query: 132 DKIYRGINNYAQYYKKKDTAAGN 154
+K + +Y KK N
Sbjct: 105 EKALKLKEDYMISQKKLSETEAN 127
>SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)
Length = 1292
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 65 KSKIDVIEDNDDS------NDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEK 118
+ +ID++EDN S N +E ++ +Q R+N ELD K + +++ +
Sbjct: 605 QKQIDILEDNSQSESSMVENLKENLKVKSETVMQLNRDNEEVRAELDRMKSK-LESVMQD 663
Query: 119 AQKINEELHGQADDK 133
N+EL + ++
Sbjct: 664 LDVKNKELESLSSER 678
>SB_25569| Best HMM Match : DUF600 (HMM E-Value=1.3)
Length = 271
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 60 TGGPKKSKIDVIEDNDDSNDEEKTS 84
+GG +D I+D+DD ND+++ S
Sbjct: 20 SGGDYNGNVDDIDDDDDDNDDDEFS 44
>SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1531
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/78 (23%), Positives = 35/78 (44%)
Query: 70 VIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELHGQ 129
V+E ++ + E + R + Q ++A E +EK D +AI + +K +EE Q
Sbjct: 24 VLESSNLAESELREESRMRKRTESQLQDAMRNVEDLSEKLADQEAILKSLRKQSEEKERQ 83
Query: 130 ADDKIYRGINNYAQYYKK 147
+ + + + Y K
Sbjct: 84 LRENLSQSQKDNFSYQSK 101
>SB_20440| Best HMM Match : SRP-alpha_N (HMM E-Value=1.4)
Length = 526
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 61 GGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQ 120
GG +K+K D D ++ +K+ + V+ RE A A E TE+ R E +
Sbjct: 444 GGKRKAKADGESDEASTSGGKKSRRSGGEVVEFLREKAKAEQESRTEQARQQSLQMELLR 503
Query: 121 KINE 124
K +E
Sbjct: 504 KQSE 507
>SB_18819| Best HMM Match : DUF822 (HMM E-Value=0.3)
Length = 866
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/68 (20%), Positives = 29/68 (42%)
Query: 54 NPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQ 113
NPN+ + GG ++ E+++ D K +++ T+ E+ R+ Q
Sbjct: 182 NPNVSNGGGQANESLEAEENDETMADTSKDESEGRSPRRKRNSTNTSDDEMTVTVRREKQ 241
Query: 114 AIFEKAQK 121
++ QK
Sbjct: 242 RELKRKQK 249
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/40 (25%), Positives = 24/40 (60%)
Query: 71 IEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDR 110
+E++ D N EEK ++ + +++E++ E+D E+ +
Sbjct: 1583 VEESKDENPEEKIEEKKDDTASEKKESSEEKMEVDGEEQK 1622
>SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7)
Length = 241
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/85 (22%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 72 EDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELHGQAD 131
ED+DD +DE+ + ++ A+ + K +DA+ +K +K++E+ +
Sbjct: 118 EDSDDGDDEDDEKESGDGDAGNAKDEASGESDDAKPKTKDAEKKDDK-KKVDEKKEDEKK 176
Query: 132 DKIYRGINNYAQYYKKKDTAAGNAS 156
D + ++ + KK D++A S
Sbjct: 177 DD-DKKVDEKKEDDKKNDSSASGES 200
>SB_35674| Best HMM Match : SH2 (HMM E-Value=0)
Length = 871
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/40 (25%), Positives = 24/40 (60%)
Query: 71 IEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDR 110
+E++ D N EEK ++ + +++E++ E+D E+ +
Sbjct: 162 VEESKDENPEEKIEEKKDDTASEKKESSEEKMEVDGEEQK 201
>SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 757
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 237 ELPFKCFVCREGFTNP 252
E P+ C +C +GFTNP
Sbjct: 467 EKPYSCKICGKGFTNP 482
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Query: 76 DSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDA----QAIFEKAQKINEELHGQAD 131
DSN+ + S TTL Q+ EN +T K A QA ++ QK ++ + A+
Sbjct: 2573 DSNEAKIASLETTLRRTQEHENQVRQELYNTHKRLTALEHEQASNKERQKSLQDAYQSAE 2632
Query: 132 DKIYRGINNYAQYYKKKDTAAGN 154
+K + +Y KK N
Sbjct: 2633 EKALKLKEDYMISQKKLSETEAN 2655
>SB_27422| Best HMM Match : Dynamin_N (HMM E-Value=3)
Length = 485
Score = 28.3 bits (60), Expect = 6.5
Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 5/89 (5%)
Query: 63 PKKSKIDVIEDNDDSNDEEKT----SQRTTLSVQQQRENATATYELDTEKDRDAQAIFEK 118
PK+ ++ +ED DD ND+E+ R R + + T K A+
Sbjct: 359 PKRRRLPPVEDLDDDNDDEENPPPPPPRPRKGKPHPRIPSVCATTMPTRKTPPTPALSRM 418
Query: 119 AQKINEELHGQADDKIYRGINNYAQYYKK 147
A + EE+ G D R Y+ K
Sbjct: 419 A-LVPEEIEGLVKDSRTRHRTPVVSYHPK 446
>SB_24458| Best HMM Match : P60 (HMM E-Value=0.00014)
Length = 351
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 67 KIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINE 124
K+D +D+D+ N+EE + S Q+ + E + +K ++ +A EK QK+ E
Sbjct: 228 KVDDDDDDDEDNEEEVMNGPILRSKQKTSQQKRKELE-EKQKQKELEA--EKEQKLKE 282
>SB_21591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 72 EDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQA 114
+D+DD ++EE+ + ++A A + D + D DA A
Sbjct: 57 DDDDDDDEEEEEEEEENDDDDDDDDDADADADADADADADADA 99
>SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94)
Length = 1058
Score = 28.3 bits (60), Expect = 6.5
Identities = 35/139 (25%), Positives = 54/139 (38%), Gaps = 12/139 (8%)
Query: 50 VNKPNPNIQSTGGPKKSKIDVIEDNDDSNDE-----EKTSQRTTLSVQQQRENATATYEL 104
V+ + K +DVI + D KT + SV+ N T T +
Sbjct: 870 VSDKKKEADTNASDKNKDVDVITTSGDVATSANATLNKTKETNPSSVETNVPNDTITEKE 929
Query: 105 D----TEKDRDAQAIF--EKAQKINEELHGQADDKIYRGINNYAQYYKKKDTAAGNASSG 158
+ EK+ + +AI K + ++E G+A I A KKKD AA S
Sbjct: 930 EQKTINEKNSNEKAISLDTKEESDSQEKVGEAAQPESNKIEATASSDKKKDLAAEKVSKN 989
Query: 159 LV-RKGPIRAPANLRATVR 176
+V RK P + + V+
Sbjct: 990 VVTRKRPASSESESSGVVK 1008
>SB_5625| Best HMM Match : DBR1 (HMM E-Value=1.1e-26)
Length = 566
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 67 KIDVIEDNDDSNDEEKTSQRTTLSVQQQREN-----ATATYELDTEKDRDAQAIFEKAQK 121
+I++ +DNDDSN +K + +++ ++ AT E++ E D D +KA
Sbjct: 384 EINLEDDNDDSNHGKKATDPDEINLDDSDDSDHGKKATDPDEINLEDDNDDSNHGKKATD 443
Query: 122 INEELHGQADDKIYRGI 138
+E++ DD GI
Sbjct: 444 -PDEINLDGDDNSDHGI 459
>SB_5549| Best HMM Match : PT (HMM E-Value=1.9)
Length = 282
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Query: 45 LPTKRVNKPN--PNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATY 102
L K NKP P +S P+ D+ ED + E K + +++ E+ +
Sbjct: 164 LEGKPENKPEKKPKAKSEDKPEDMPEDMPEDKPEYRPEYKPEDKPEKKPEKKPEDKSEDK 223
Query: 103 ELDTEKDRDAQAIFEKAQKINEE 125
D KD+ + +K + EE
Sbjct: 224 PEDKHKDKPEDKLEDKPEDKKEE 246
>SB_51770| Best HMM Match : Gal_Lectin (HMM E-Value=6.8e-23)
Length = 216
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 55 PNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQ 94
P + T G I + ++DD N+E+ +R L + +
Sbjct: 42 PEVDETSGEMTEDIPTVVEDDDENEEDGDDRRRNLGLSNK 81
>SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07)
Length = 1128
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 87 TTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELHGQADD 132
T +Q Q+++AT+ E+ E+ RD +K+N +++GQ ++
Sbjct: 44 TMAELQSQQDSATS--EMSGEQSRDENEKSNDDEKLNGDINGQEEE 87
>SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6)
Length = 159
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/64 (20%), Positives = 32/64 (50%)
Query: 62 GPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQK 121
G + + + ++ + +EEK +++ T +++ + E +TEK+ + + EK +K
Sbjct: 17 GETEKEAETKKEAETEKEEEKETKKKTEKEEEKWKQEETEKEAETEKEAETEKEAEKEKK 76
Query: 122 INEE 125
E
Sbjct: 77 KKTE 80
>SB_34153| Best HMM Match : DUF972 (HMM E-Value=0.17)
Length = 473
Score = 27.9 bits (59), Expect = 8.6
Identities = 28/137 (20%), Positives = 58/137 (42%), Gaps = 5/137 (3%)
Query: 85 QRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELHGQADDKIYRGINNYAQY 144
++ L Q ++ T+ E++ KD A+ + E+ K+ EE+ G A+ + + Q
Sbjct: 290 EKRLLQEQFKQAEETSKDEINQLKDEIAKILSEQLTKLQEEM-GIANQDLISKLEERLQ- 347
Query: 145 YKKKDTAAGNASSGLVRKGPIRAPANLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHD 204
+ + TA + +R+ + A W+ Q D ++ + ++ K
Sbjct: 348 HSETSTAQLTIETEELRE---QLKEQHSAVDGWNTQIQQLTDERDNLAQQYEEAAKIAEK 404
Query: 205 RSDYKHGWQLEREELET 221
R +ER+E+ET
Sbjct: 405 RKSMLDQMAIERQEIET 421
>SB_25098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 69 DVIEDNDDSNDEEKTSQRT 87
D I+DNDD ND+E RT
Sbjct: 36 DEIDDNDDDNDDEVKCSRT 54
>SB_23089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 46 PTKRVNKPN-PNIQSTGGPKKSKIDVIEDNDDSNDEEKTS 84
P KR + P+ P+ + PKK + + ED+++ +D E+ S
Sbjct: 379 PPKRSSPPHEPHFELVPPPKKPRCESEEDDEEEHDLERPS 418
>SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07)
Length = 844
Score = 27.9 bits (59), Expect = 8.6
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 46 PTKRVNKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKT---SQRTTLSVQQQRENATATY 102
PTK + T + + D+ + DEEKT + T+ +Q++R +
Sbjct: 415 PTKSKETDSSEKMETSKEEAEQQKTAIDDASAGDEEKTEVKKEDATVEIQKERTEEEESS 474
Query: 103 ELDTEKDRDAQAIFEKAQKIN--EELHGQADDK 133
+ EK +++ + EK Q+ + EE + DDK
Sbjct: 475 SKE-EKKQESSSKEEKKQESSSKEEKKQEKDDK 506
>SB_5078| Best HMM Match : Gal_Lectin (HMM E-Value=6.8e-23)
Length = 216
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 55 PNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQ 94
P + T G I + ++DD N+E+ +R L + +
Sbjct: 42 PEVDETSGEMTEDIPTVVEDDDENEEDGDDRRRNLGLSNK 81
>SB_33706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 969
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 55 PNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQA 114
PN++ G P S++ + + + +++E K Q T +RE A + L ++ ++
Sbjct: 558 PNVEVRGNPIHSEVHLGDTSGLTSEELKELQEKT-----KREQAKKYFSL---REGQFES 609
Query: 115 IFEKAQKINEELHGQADDKIYRG 137
E+ +KI LH + D KI G
Sbjct: 610 ALEECKKI---LHPEKDGKIING 629
>SB_24403| Best HMM Match : BRF1 (HMM E-Value=1.2)
Length = 623
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 54 NPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTT 88
+P+ ++TG K K DV+E + D +D +K S T
Sbjct: 153 SPSTENTGSTKSDKDDVVEISSD-DDSDKISANPT 186
>SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)
Length = 2059
Score = 27.9 bits (59), Expect = 8.6
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 64 KKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKIN 123
KK++I D D+SND++KT LS ++ + + R + I I+
Sbjct: 1367 KKTQISD-NDKDESNDKDKTKTPLKLSRKKMDVENIDLAKTGEQPKRVGRQIEVNEISID 1425
Query: 124 EELHGQADDKIYRGINNYAQYYKKKDTAAGNASSGLVRK 162
+++ DK I+ ++ +KDT N S+ K
Sbjct: 1426 KKIENIKADKQGDEIDEDSRKVNEKDTQECNGSNSRTGK 1464
>SB_14909| Best HMM Match : Spb1_C (HMM E-Value=0)
Length = 437
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 73 DNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEK--AQKINEELHGQA 130
+NDD+ E + SV Q+EN + E+ A A K + I + L
Sbjct: 82 ENDDNEMESSDGEDNQESVDTQKENVENPLLVTLEEKESASAKTSKWFEKDIFQGLEDDV 141
Query: 131 DDKIYRGINNYAQYYKKK 148
D+ + I+ Q YKKK
Sbjct: 142 DEDV--EISQMLQDYKKK 157
>SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08)
Length = 1381
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/54 (18%), Positives = 27/54 (50%)
Query: 72 EDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEE 125
ED ++ +DE + + + ++++ N T+++ T K R +++ + E
Sbjct: 976 EDGEEEDDENEEDENEEDASEEEQPNVTSSFSFRTPKSRGGTIFGKRSYSMESE 1029
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.311 0.130 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,642,360
Number of Sequences: 59808
Number of extensions: 376846
Number of successful extensions: 1967
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 1840
Number of HSP's gapped (non-prelim): 164
length of query: 256
length of database: 16,821,457
effective HSP length: 81
effective length of query: 175
effective length of database: 11,977,009
effective search space: 2095976575
effective search space used: 2095976575
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 59 (27.9 bits)
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