Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000186-TA|BGIBMGA000186-PA|IPR000571|Zinc finger,
CCCH-type
(256 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.02 |cwf24||GCN5-related N acetyltransferase|Schizosacch... 98 1e-21
SPBC1718.07c |zfs1|moc4|transcription factor Zfs1 |Schizosacchar... 32 0.071
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 31 0.22
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 30 0.29
SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr ... 30 0.29
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 30 0.38
SPAC140.04 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.38
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 29 0.66
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 29 0.87
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 28 1.2
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 28 1.2
SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces po... 28 1.2
SPAC31G5.21 |||human family 32A homolog|Schizosaccharomyces pomb... 28 1.2
SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificit... 28 1.5
SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces p... 28 1.5
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 28 1.5
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 27 2.0
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 27 2.0
SPAC227.08c |yth1||zinc finger protein Yth1|Schizosaccharomyces ... 27 2.0
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|... 27 2.7
SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificit... 27 3.5
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 27 3.5
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 27 3.5
SPBC1685.08 |||histone deacetylase complex subunit Cti6|Schizosa... 26 4.7
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 26 6.2
>SPBC13E7.02 |cwf24||GCN5-related N
acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 97.9 bits (233), Expect = 1e-21
Identities = 45/129 (34%), Positives = 75/129 (58%), Gaps = 9/129 (6%)
Query: 133 KIYRGINNYAQYYKKKDTAAGNASSGLVRKGPIRAPANLRATVRWDYQPDICKDYKETGF 192
++++ N+Y+++ K+ + G V + +R DYQPD+CKDYK TG+
Sbjct: 142 ELFQSQNDYSRFLPKRKDFEKKSQVGPVLSSNA---STVRMNTIIDYQPDVCKDYKLTGY 198
Query: 193 CGFGDSCKFLHDRSDYKHGWQLERE--ELETPGQDG----DSDYEIHSDEELPFKCFVCR 246
CG+GD+CKFLH R DYK GWQL+RE ++ + G + + E++PF C +C+
Sbjct: 199 CGYGDTCKFLHMREDYKAGWQLDREWDSVQEKYKKGAKLEEGMVKNEKKEDIPFVCLICK 258
Query: 247 EGFTNPVVT 255
+ + +P+ T
Sbjct: 259 KDYRSPIAT 267
>SPBC1718.07c |zfs1|moc4|transcription factor Zfs1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 404
Score = 32.3 bits (70), Expect = 0.071
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 179 YQPDICKDYKETGFCGFGDSCKFLHDRSDYK 209
Y+ + CK+++ +G C +G C+F H + K
Sbjct: 327 YKTEPCKNWQISGTCRYGSKCQFAHGNQELK 357
Score = 32.3 bits (70), Expect = 0.071
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 179 YQPDICKDYKETGFCGFGDSCKFLHDRSD 207
Y+ + C+ + G+C +G C FLHD S+
Sbjct: 365 YKSERCRSFMMYGYCPYGLRCCFLHDESN 393
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 30.7 bits (66), Expect = 0.22
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 69 DVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELHG 128
D NDDS+ +E +S +S+ ++ + E + E + +A + +E NE+ G
Sbjct: 1909 DASSQNDDSSFDEASSHGDVISIDEE-DLDNQGEEFEWEDEDNASSGYEDELDYNEDEVG 1967
Query: 129 QADDKIYRGINN 140
+ D + + N
Sbjct: 1968 ENDSTTFEAMEN 1979
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 30.3 bits (65), Expect = 0.29
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 76 DSNDEEKTSQRT--TLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELHGQA 130
DS DEE + T T V Q ++ A E +KDR KAQK E G+A
Sbjct: 388 DSEDEEYNNPSTQKTEKVSQSKKGAKVKEEKGLKKDRKLPKKMRKAQKKLERKAGKA 444
Score = 25.8 bits (54), Expect = 6.2
Identities = 20/100 (20%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 57 IQSTGGPKKSKIDVIEDNDDSNDEE---------KTSQRTTLSVQQQRENATATYELDTE 107
+ +T + + D++E+++D ++EE + LS+ +N Y+ D+E
Sbjct: 331 VGNTDSLAEDEDDILEEDEDEDEEELLAIFDASDDSEIEAYLSIGDTLQNDFTIYDYDSE 390
Query: 108 KDRDAQAIFEKAQKINEELHGQADDKIYRGINNYAQYYKK 147
+ +K +K+++ G A K +G+ + KK
Sbjct: 391 DEEYNNPSTQKTEKVSQSKKG-AKVKEEKGLKKDRKLPKK 429
>SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 377
Score = 30.3 bits (65), Expect = 0.29
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 184 CKDYKETGFCGFGDSCKFLHD 204
C+ Y G CG G +C+F+H+
Sbjct: 209 CRYYNANGICGKGAACRFVHE 229
Score = 27.9 bits (59), Expect = 1.5
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 175 VRWDYQPDICKDYKETGFCGFGDSCKFLH 203
+ + IC ++ + GFC G SCK H
Sbjct: 282 IHYSENAPICFEFAKYGFCELGTSCKNQH 310
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 29.9 bits (64), Expect = 0.38
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 62 GPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQK 121
G + S +D + ND+ N+ + + +Q A ELD + D + K +
Sbjct: 119 GKRSSTVDAL--NDELNELGENEEEVLTEQKQLDPTLAAKKELDLQMDAVLKPTRTKKRS 176
Query: 122 INEELHGQADDKIYR 136
+ L ADD++ R
Sbjct: 177 NEDNLEQMADDEVLR 191
>SPAC140.04 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 295
Score = 29.9 bits (64), Expect = 0.38
Identities = 30/167 (17%), Positives = 66/167 (39%), Gaps = 8/167 (4%)
Query: 76 DSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELHGQADDKIY 135
++ND E T ++ + +++ + + KD + + + Q EEL ++ ++
Sbjct: 48 EANDNETTKRKLLVKQKRKSNKEFQSNIIKKRKDEERKGTLKTEQANEEELLQRSRLELE 107
Query: 136 RGINNYAQY----YKKKDTAAGNASSGLVRKGPIRAPANLRATVRWDYQPDICKDYKETG 191
R Y QY + K+T RK AP N + ++ ETG
Sbjct: 108 RKAKKYDQYAAGELEIKETEDDGILVDFTRKWAEEAPENETVEITDEFGRTRSVSIYETG 167
Query: 192 FCGFGDSCKFLHDR---SDYKHGWQLEREELETPGQDGDSDYEIHSD 235
++ ++ DY ++++ E+++ ++ D +H D
Sbjct: 168 NTLLSQKEEYKPEKPIYGDYMPSFEVDEEKVQKLWKE-DEQQAVHYD 213
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 29.1 bits (62), Expect = 0.66
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 77 SNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKI 122
SNDEE+T +L V ++ + A+ ELD +K + EK QK+
Sbjct: 899 SNDEEETISELSLEVLEKLWFSPASNELDCQKGYEQLTFLEK-QKL 943
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 28.7 bits (61), Expect = 0.87
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 66 SKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEE 125
S D ++D N T+ +S Q N+T++ E + KD D+ I +K+ K E
Sbjct: 306 SDSDSSSSSEDGNSNTDTTTSGEVSAQSST-NSTSSEESTSVKDEDSSKIHDKSLKRKHE 364
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 48 KRVNKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTE 107
KR + P P+ +S KKSK ++ S E ++S + S + E++++ E +
Sbjct: 59 KRASSPEPSKKSVKKQKKSK---KKEESSSESESESSSSESESSSSESESSSSESESSSS 115
Query: 108 KDRDAQAIFEKAQKINEELHGQAD 131
+ +++ E K E+ ++
Sbjct: 116 ESSSSESEEEVIVKTEEKKESSSE 139
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 28.3 bits (60), Expect = 1.2
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 96 ENATATYELDTEKDRDAQA-IFEKAQKINEELHGQADDKIYRGINNYAQYYKKK 148
EN T YEL R A I KA+ +N + G D + R YA +K+K
Sbjct: 1102 ENYTR-YELKASDHRPVSALIHSKAKMVNAQSQGSTWDVVKRKWIEYADEFKRK 1154
Score = 27.1 bits (57), Expect = 2.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 50 VNKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTL 89
VN+ P + + KSK + + D +N +EKT++R T+
Sbjct: 10 VNEDEPELPPSVLSLKSKFESLSTGDLTNLDEKTAKRRTV 49
>SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 47 TKRVNKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENAT 99
T++++ +P+ S K++ I ED N E+T R+++ + R N +
Sbjct: 285 TEKLSNDSPSNTSLSLQKQNSIVANEDKRSVNGSERTETRSSIDQSEMRTNVS 337
>SPAC31G5.21 |||human family 32A homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 118
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 75 DDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELHGQ 129
D EK + ++ EN +TY++ KD D+ +AQK E + Q
Sbjct: 24 DSKKLAEKVQEHSSRDKSPLEENGVSTYQMLRSKDTDSAMPMTEAQKHFESVQEQ 78
>SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificity
factor complex subunit Ysh1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 66 SKIDVIED---NDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQ 120
S+ DV ED N++S+D++ Q+T + + EN T E ++++ Q +K +
Sbjct: 716 SQNDVSEDDFENEESDDDKIFEQQTKIEDDVKNENKTEPVEEQKSEEKNEQPNLKKEE 773
>SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 723
Score = 27.9 bits (59), Expect = 1.5
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 177 WDYQPDICKDYKETGFCGFGD-SCKFLHDRSDYKHGWQLEREELETPGQDGDSDYEIHSD 235
WD+ P++ K F G GD + FL + QL LE P + DS EI+ +
Sbjct: 303 WDWNPNLIKVVPYEFFVGIGDINSNFLAKSTPLPEQEQL--IPLEIPKDEPDSVDEINEE 360
Query: 236 EE 237
E
Sbjct: 361 NE 362
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 27.9 bits (59), Expect = 1.5
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 42 QVVLPTKRVNKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQR---TTLSVQQQ-REN 97
+VV+P K + PNP+ S+ + EE+ SQR L++QQ+ +E
Sbjct: 487 EVVVPQKNASSPNPS------ETNSRAETPTAAPPQISEEEASQRKDAIKLAIQQRIQEK 540
Query: 98 ATATYELDTEKDRDAQAIFEKAQKINEELHGQADDKIYR 136
A A + E+ +A ++ E+ +A++K R
Sbjct: 541 AEAEAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKR 579
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 27.5 bits (58), Expect = 2.0
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 73 DNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQA---IFEKAQKINEELHGQ 129
D S++EE T S +++ EN EL+++++ QA I EK +E
Sbjct: 144 DEFSSDEEEMDDISVTSSEEEEEENGARIEELNSDEEDAEQAEEEILEKPVPKDEVAEKH 203
Query: 130 ADDKI 134
+ DK+
Sbjct: 204 SKDKL 208
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 27.5 bits (58), Expect = 2.0
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 83 TSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELHGQADDKIYRGINNYA 142
++ T + +++ Y D D D Q EK QKI+E D+K+ + Y
Sbjct: 16 STDATAVDIKKAYRKLAVKYHPDKNPD-DPQGASEKFQKISEAYQVLGDEKLR---SQYD 71
Query: 143 QYYKKK 148
Q+ K+K
Sbjct: 72 QFGKEK 77
>SPAC227.08c |yth1||zinc finger protein Yth1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 170
Score = 27.5 bits (58), Expect = 2.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 184 CKDYKETGFCGFGDSCKFLH 203
C Y E G+C G+ C +LH
Sbjct: 82 CHFYAERGWCSNGEECLYLH 101
>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
Prp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 906
Score = 27.1 bits (57), Expect = 2.7
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 41 QQVVLPTKRVNKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEK---TSQRTTLSVQQQREN 97
+Q L ++ K NP + S K + + D D +N E T ++ T +++R
Sbjct: 110 KQEQLQKEKYEKENPKVSSQFADLKRGLSTLTDEDWNNIPEPGDLTRKKRTKQPRRERFY 169
Query: 98 ATATYELDTEKDRDAQAI 115
AT+ + L + ++ + QAI
Sbjct: 170 ATSDFVLASARNEN-QAI 186
>SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificity
factor complex subunit Rna14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 733
Score = 26.6 bits (56), Expect = 3.5
Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 74 NDDSNDEEKTSQRTTLSVQQ--QRENATATYELDTEKDRDAQAIFEKAQKINEELHGQAD 131
N D N E S + ++EN + E D + K +++ +L GQ
Sbjct: 2 NSDDNVEADASSNIIKDSPKIKEQENTSTVNESDVLATSTTASSGVKRKRLPNDLVGQLR 61
Query: 132 DKIYRGINNYAQYY 145
DKI N+ + +Y
Sbjct: 62 DKIQENPNDISSWY 75
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 106 TEKDRDAQAIFEKAQKINEELHGQADDKIYRGINNYAQYYKKK 148
T+++ D + I E+ +K+ E+LH Q K + IN + Y +K
Sbjct: 306 TQEEVD-KLIQERMEKVAEDLHAQYSAKHTQKINAFKANYARK 347
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 26.6 bits (56), Expect = 3.5
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Query: 79 DEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQA-IFEKAQKINEELHGQADDKIYRG 137
+ +SQR LSV ++EN ++T E + + A + F K +L + +
Sbjct: 581 ENNDSSQRKPLSVDPKQENVSSTVETAKQAETTASSDSFRKYANTLNDLRHLKSSRNRKA 640
Query: 138 INNYAQYYKKKDTAAGNASSGLVRKGPIRAP 168
+N Q T S + G ++P
Sbjct: 641 TSNETQ-SSSNSTETSKLSKNVSESGKDKSP 670
>SPBC1685.08 |||histone deacetylase complex subunit
Cti6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 424
Score = 26.2 bits (55), Expect = 4.7
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 47 TKRVNKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDT 106
+K ++ P P +S G K + E+ND+ ++ K S+ + + + + T E D
Sbjct: 185 SKSLSPPAPQDESQGTEINLKQKIEEENDEILEDSKESKDE--NEENKETSTTNVAETDA 242
Query: 107 EKDRDAQAIFEKAQKINEELHGQADD 132
++ + E A +EE H ++
Sbjct: 243 PEEETVDTVEEIA---DEEKHSVKEE 265
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 25.8 bits (54), Expect = 6.2
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 48 KRVNKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQREN 97
K V++P ++ T S+ D DND D + S+ T ++ EN
Sbjct: 146 KSVSRPPSSMSRTNLDVSSRWDNTADNDSQIDAQDLSRSTPSPLRSAMEN 195
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.130 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,171,816
Number of Sequences: 5004
Number of extensions: 50300
Number of successful extensions: 217
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 188
Number of HSP's gapped (non-prelim): 35
length of query: 256
length of database: 2,362,478
effective HSP length: 71
effective length of query: 185
effective length of database: 2,007,194
effective search space: 371330890
effective search space used: 371330890
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 53 (25.4 bits)
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