Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000186-TA|BGIBMGA000186-PA|IPR000571|Zinc finger,
CCCH-type
(256 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protei... 284 2e-78
DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protei... 283 5e-78
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 25 1.6
AY146755-1|AAO12070.1| 320|Anopheles gambiae odorant-binding pr... 25 1.6
AY146754-1|AAO12069.1| 334|Anopheles gambiae odorant-binding pr... 25 1.6
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 25 1.6
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 25 2.1
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 24 3.7
AJ459961-1|CAD31060.1| 700|Anopheles gambiae prophenoloxidase 8... 24 4.9
DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. 23 6.5
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 23 6.5
AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 23 8.6
>DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 284 bits (696), Expect = 2e-78
Identities = 136/229 (59%), Positives = 172/229 (75%), Gaps = 15/229 (6%)
Query: 43 VVLPTKRVNKPNPNIQSTGGPKKSKIDVIE-DNDDSNDEEKT------SQRTTLSVQQQR 95
VV+ R K NPN+QST +K + D+ S++EE++ S+R+ +
Sbjct: 33 VVVVQDRRKKANPNVQSTSALRKKQARSSNADSSHSSEEEESAGLSYKSKRSAQPEGPRD 92
Query: 96 ENATATYELDTEKDRDAQAIFEKAQKINEELHGQADDKIYRGINNYAQYYKKKDTAAGNA 155
+ ATA E++TEKDRDAQAI++K+ IN+EL G+ DDK+YRG+NNY Q++KKKD+A GNA
Sbjct: 93 QGATAELEIETEKDRDAQAIYQKSIDINKELEGKEDDKVYRGLNNYTQFFKKKDSAQGNA 152
Query: 156 SSGLVRKGPIRAPANLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQLE 215
+SG+VRKGPIRAPAN+R+TVRWDYQPDICKDYKETG+CGFGDSCKFLHDRSDYKHGWQ+E
Sbjct: 153 ASGMVRKGPIRAPANIRSTVRWDYQPDICKDYKETGYCGFGDSCKFLHDRSDYKHGWQME 212
Query: 216 REELET----PGQDGDSD---YEIHS-DEELPFKCFVCREGFTNPVVTK 256
+E + G D D D YEIHS DEELPFKC+VCRE F +P+VTK
Sbjct: 213 QEGAGSGHNHGGDDSDGDDTKYEIHSDDEELPFKCYVCRESFVDPIVTK 261
>DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 283 bits (693), Expect = 5e-78
Identities = 136/229 (59%), Positives = 171/229 (74%), Gaps = 15/229 (6%)
Query: 43 VVLPTKRVNKPNPNIQSTGGPKKSKIDVIE-DNDDSNDEEKT------SQRTTLSVQQQR 95
VV+ R K NPN+QST +K + D+ S++EE++ S+R+ +
Sbjct: 33 VVVVQDRRKKANPNVQSTSALRKKQARSSNADSSHSSEEEESAGLSYKSKRSAQPEGPRD 92
Query: 96 ENATATYELDTEKDRDAQAIFEKAQKINEELHGQADDKIYRGINNYAQYYKKKDTAAGNA 155
+ ATA E++TEKDRDAQAI++K+ IN+EL G+ DDK+YRG+NNY Q++KKKD+A GNA
Sbjct: 93 QGATAELEIETEKDRDAQAIYQKSIDINKELEGKEDDKVYRGLNNYTQFFKKKDSAQGNA 152
Query: 156 SSGLVRKGPIRAPANLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQLE 215
+SG+VRKGPIRAPAN+R+TVRWDYQPDICKDYKETG+CGFGDSCKFLHDRSDYKHGWQ+E
Sbjct: 153 ASGMVRKGPIRAPANIRSTVRWDYQPDICKDYKETGYCGFGDSCKFLHDRSDYKHGWQME 212
Query: 216 RE----ELETPGQDGDSD---YEIHS-DEELPFKCFVCREGFTNPVVTK 256
+E G D D D YEIHS DEELPFKC+VCRE F +P+VTK
Sbjct: 213 QEGGGSGHNHGGDDSDGDDTKYEIHSDDEELPFKCYVCRESFVDPIVTK 261
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 25.4 bits (53), Expect = 1.6
Identities = 12/53 (22%), Positives = 25/53 (47%)
Query: 63 PKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAI 115
P + + ++ +DS D+ + RT Q N +++ + + DA+AI
Sbjct: 1358 PSQEAVSGTDNANDSGDKPGSRNRTITQSQDTVVNLGGRLKIEFKSETDAEAI 1410
Score = 23.0 bits (47), Expect = 8.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 59 STGGPKKSKIDVIEDNDDSNDEEKTS 84
S GG ++ D +D DD +D++ T+
Sbjct: 1817 SNGGEDGNEDDDEDDEDDDDDDDDTT 1842
>AY146755-1|AAO12070.1| 320|Anopheles gambiae odorant-binding
protein AgamOBP32 protein.
Length = 320
Score = 25.4 bits (53), Expect = 1.6
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 106 TEKDRDAQA-IFEKAQKINEELHGQADDKIYRGINNYAQYYKKKDT 150
+E+D D A F + E HG D++Y NNYA + ++T
Sbjct: 185 SERDVDCLARCFLLRSGLYSEQHGPHLDRLYVQCNNYANETRFRET 230
>AY146754-1|AAO12069.1| 334|Anopheles gambiae odorant-binding
protein AgamOBP33 protein.
Length = 334
Score = 25.4 bits (53), Expect = 1.6
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 106 TEKDRDAQA-IFEKAQKINEELHGQADDKIYRGINNYAQYYKKKDT 150
+E+D D A F + E HG D++Y NNYA + ++T
Sbjct: 185 SERDVDCLARCFLLRSGLYSEQHGPHLDRLYVQCNNYANETRFRET 230
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 25.4 bits (53), Expect = 1.6
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 212 WQLEREELETPGQDGDSDYEIHSDEELPFKCFVCREGFTNP 252
+QL+ E T G + D+D+ + + C VC G +P
Sbjct: 59 YQLQVEATNTCGDETDTDFCVQTGYSNRKSCDVCHAGQHSP 99
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 25.0 bits (52), Expect = 2.1
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 81 EKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELH 127
EKT+ R Q + ++ YEL+ K R AQ F++ ++ EEL+
Sbjct: 704 EKTAHRFG---QLKEQHDMLNYELNNLKQRLAQTSFQQTKEEIEELN 747
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 24.2 bits (50), Expect = 3.7
Identities = 10/17 (58%), Positives = 11/17 (64%), Gaps = 1/17 (5%)
Query: 233 HSDEELPFKCFVCREGF 249
HS E+ P KC VC GF
Sbjct: 149 HS-EDRPHKCVVCERGF 164
>AJ459961-1|CAD31060.1| 700|Anopheles gambiae prophenoloxidase 8
protein.
Length = 700
Score = 23.8 bits (49), Expect = 4.9
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 163 GPIRAPANLRATVRWDYQPDICKDYKETGFC 193
G I ANLR VR Y P + + FC
Sbjct: 269 GRIEPLANLREPVREAYYPKLLRTSNNRTFC 299
>DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein.
Length = 847
Score = 23.4 bits (48), Expect = 6.5
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 58 QSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDR 110
QS P+K + ED+DD DE + R + N++AT ++E +R
Sbjct: 81 QSGKKPEKDRKPSDEDDDDEGDEANDA-RPRFGSKAAAANSSAT-SSESEDER 131
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 23.4 bits (48), Expect = 6.5
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 72 EDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQA 114
ED +N E +V+ Q E+ E++ E+D A
Sbjct: 1330 EDEVAANVENAKENEVAANVENQNEDEVQPMEVEEERDEGVAA 1372
>AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein
protein.
Length = 455
Score = 23.0 bits (47), Expect = 8.6
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 65 KSKIDVIEDNDDSNDEEKTSQRTTLS--VQQQRENATATYELDTEKDRDAQAIFEKAQKI 122
+ ++ ++S E+ T R + +++QRE+A E ++ A+A EK +
Sbjct: 42 RQNLEETRKKNESLQEQLTQLRWLMEEKLREQREDAQRREEEARRREEAAKADNEKLRVE 101
Query: 123 NEELH 127
+E H
Sbjct: 102 QQETH 106
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.311 0.130 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 256,406
Number of Sequences: 2123
Number of extensions: 11444
Number of successful extensions: 34
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 14
length of query: 256
length of database: 516,269
effective HSP length: 63
effective length of query: 193
effective length of database: 382,520
effective search space: 73826360
effective search space used: 73826360
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 47 (23.0 bits)
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