Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000186-TA|BGIBMGA000186-PA|IPR000571|Zinc finger,
CCCH-type
(256 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 26 0.39
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 24 1.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 2.7
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 2.7
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 2.7
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 3.6
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 3.6
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 23 3.6
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 6.3
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 6.3
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 6.3
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 6.3
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 6.3
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 6.3
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 6.3
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 6.3
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 8.3
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 8.3
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 8.3
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 8.3
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 8.3
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 8.3
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 25.8 bits (54), Expect = 0.39
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 170 NLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKH--GWQLEREELETPGQDGD 227
N+RA V Y D+ K+Y G C +D+ W ++ E PG D D
Sbjct: 96 NVRAVVAQYYDTDVNKEYAIRGNSAIL-KCVVPSFVADFVKVLSWHTDQGEEFVPGDDYD 154
Query: 228 SDYEIHSDEELPFKCFVCREGF 249
Y + EL + +G+
Sbjct: 155 GKYLVLPSGELHIRDVGPEDGY 176
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 23.8 bits (49), Expect = 1.6
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 64 KKSKIDVIEDNDDSNDEEKTSQ-RTTLSVQQQR-----ENATATYELDTEKDRDAQAIFE 117
K + + + + + EE+TS+ R + S ++++ EN+ Y +T K+R
Sbjct: 15 KDRRYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNENSYRKYR-ETSKERSRDRKER 73
Query: 118 KAQKINEELHGQADDKIYRGINNYAQYYKK 147
+ K + + +++ Y NNY Y KK
Sbjct: 74 ERSKEPKIISSLSNNYKYSNYNNYNNYNKK 103
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 2.7
Identities = 12/61 (19%), Positives = 27/61 (44%)
Query: 71 IEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELHGQA 130
IE + + + + TS + S ++ ++ Y + RD + K + E+LH +
Sbjct: 200 IEKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEK 259
Query: 131 D 131
+
Sbjct: 260 E 260
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 2.7
Identities = 12/61 (19%), Positives = 27/61 (44%)
Query: 71 IEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELHGQA 130
IE + + + + TS + S ++ ++ Y + RD + K + E+LH +
Sbjct: 200 IEKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEK 259
Query: 131 D 131
+
Sbjct: 260 E 260
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.0 bits (47), Expect = 2.7
Identities = 11/61 (18%), Positives = 28/61 (45%)
Query: 71 IEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELHGQA 130
IE +++ + + TS + + ++ ++ Y + RD + K + E+LH +
Sbjct: 189 IEKSENESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEK 248
Query: 131 D 131
+
Sbjct: 249 E 249
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 3.6
Identities = 15/82 (18%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 70 VIEDNDDSNDEEK--TSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELH 127
V+ N+ +K TS + S ++ ++ Y + RD + K + E+LH
Sbjct: 197 VVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLH 256
Query: 128 GQADDKIYRGINNYAQYYKKKD 149
+ +K ++ +Y + ++
Sbjct: 257 NE-KEKFLEERTSHKRYSRSRE 277
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.6 bits (46), Expect = 3.6
Identities = 11/61 (18%), Positives = 28/61 (45%)
Query: 71 IEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELHGQA 130
IE + + + + TS + S ++ ++ Y + RD +++ + E+LH +
Sbjct: 200 IEKSGNESKKYATSSNSLRSRTHDFQHTSSRYSRERSCSRDRNREYKEKDRRYEKLHNEK 259
Query: 131 D 131
+
Sbjct: 260 E 260
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/18 (50%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
Query: 232 IHSDEELPFKCFVCREGF 249
IH+ E P+KC VC F
Sbjct: 141 IHTKER-PYKCDVCERAF 157
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.3
Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 70 VIEDNDDSNDEEK--TSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELH 127
V+ N+ +K TS + S ++ ++ Y + RD + K + E+LH
Sbjct: 186 VVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLH 245
Query: 128 GQAD 131
+ +
Sbjct: 246 NEKE 249
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 6.3
Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 70 VIEDNDDSNDEEK--TSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELH 127
V+ N+ +K TS + S ++ ++ Y + RD + K + E+LH
Sbjct: 197 VVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRRYEKLH 256
Query: 128 GQAD 131
+ +
Sbjct: 257 NEKE 260
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.3
Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 70 VIEDNDDSNDEEK--TSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELH 127
V+ N+ +K TS + S ++ ++ Y + RD + K + E+LH
Sbjct: 197 VVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLH 256
Query: 128 GQAD 131
+ +
Sbjct: 257 NEKE 260
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.8 bits (44), Expect = 6.3
Identities = 11/61 (18%), Positives = 27/61 (44%)
Query: 71 IEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELHGQA 130
IE + + + + TS + + ++ ++ Y + RD + K + E+LH +
Sbjct: 200 IEKSGNESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREYRKKDRRYEKLHNEK 259
Query: 131 D 131
+
Sbjct: 260 E 260
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 6.3
Identities = 11/61 (18%), Positives = 27/61 (44%)
Query: 71 IEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELHGQA 130
IE + + + + TS + + ++ ++ Y + RD + K + E+LH +
Sbjct: 205 IEKSGNESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREYRKKDRRYEKLHNEK 264
Query: 131 D 131
+
Sbjct: 265 E 265
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.8 bits (44), Expect = 6.3
Identities = 11/59 (18%), Positives = 27/59 (45%)
Query: 71 IEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELHGQ 129
IE + + + + TS + + ++ ++ Y + RD ++K + E+LH +
Sbjct: 200 IEKSGNESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREYKKKDRRYEKLHNE 258
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 6.3
Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 70 VIEDNDDSNDEEK--TSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELH 127
V+ N+ +K TS + S ++ ++ Y + RD + K + E+LH
Sbjct: 197 VVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRRYEKLH 256
Query: 128 GQAD 131
+ +
Sbjct: 257 NEKE 260
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 103 ELDTEKDRDAQAIFEKAQKINEEL 126
EL +D + I A+KI EEL
Sbjct: 839 ELSLRSVKDRETIISAAEKIAEEL 862
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 8.3
Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 70 VIEDNDDSNDEEK--TSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELH 127
V+ N+ +K TS + + ++ ++ Y + RD + K + E+LH
Sbjct: 197 VVNIKKSGNESKKYATSSNSLRNRTHDFQHTSSRYSRERRCSRDRNREYRKKDRQYEKLH 256
Query: 128 GQAD 131
+ +
Sbjct: 257 NEKE 260
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.3
Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 70 VIEDNDDSNDEEK--TSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELH 127
V+ N+ +K TS + S ++ ++ Y + RD + K + E+LH
Sbjct: 197 VVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSRERSCSRDRNREYRKKDRRYEKLH 256
Query: 128 GQAD 131
+ +
Sbjct: 257 NEKE 260
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.3
Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 70 VIEDNDDSNDEEK--TSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELH 127
V+ N+ +K TS + S ++ ++ Y + RD + K + E+LH
Sbjct: 197 VVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSRERSCSRDRNREYRKKDRRYEKLH 256
Query: 128 GQAD 131
+ +
Sbjct: 257 NEKE 260
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.3
Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 70 VIEDNDDSNDEEK--TSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELH 127
V+ N+ +K TS + S ++ ++ Y + RD + K + E+LH
Sbjct: 197 VVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSRERSCSRDRNREYRKKDRRYEKLH 256
Query: 128 GQAD 131
+ +
Sbjct: 257 NEKE 260
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.3
Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 70 VIEDNDDSNDEEK--TSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELH 127
V+ N+ +K TS + S ++ ++ Y + RD + K + E+LH
Sbjct: 197 VVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSRERSCSRDRNREYRKKDRRYEKLH 256
Query: 128 GQAD 131
+ +
Sbjct: 257 NEKE 260
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 8.3
Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 70 VIEDNDDSNDEEK--TSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELH 127
V+ N+ +K TS + S ++ ++ Y + RD + K + E+LH
Sbjct: 186 VVNIKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSRERSCSRDRNREYRKKDRRYEKLH 245
Query: 128 GQAD 131
+ +
Sbjct: 246 NEKE 249
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.311 0.130 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,866
Number of Sequences: 429
Number of extensions: 3252
Number of successful extensions: 27
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 22
length of query: 256
length of database: 140,377
effective HSP length: 56
effective length of query: 200
effective length of database: 116,353
effective search space: 23270600
effective search space used: 23270600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 43 (21.4 bits)
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