GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000184-TA|BGIBMGA000184-PA|IPR010300|Cysteine
dioxygenase type I
         (182 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   1.5  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   1.5  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   3.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.9  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 4   SFLNSSFRRSFKVLLTINKATRRFITFSL 32
           SF+ + FR  +K LL  +     F+ FSL
Sbjct: 129 SFIKAGFRLEYKQLLKRSYLIISFVLFSL 157


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 4   SFLNSSFRRSFKVLLTINKATRRFITFSL 32
           SF+ + FR  +K LL  +     F+ FSL
Sbjct: 129 SFIKAGFRLEYKQLLKRSYLIISFVLFSL 157


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)

Query: 124 MENPSHVDGAVSLHLYCPPFDSCRVFDA 151
           + N    +  VS + Y P   SCR F A
Sbjct: 46  VSNSDSENSEVSSNSYTPKIKSCRPFKA 73


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
          protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 73 SCQRHNDSCQGDSHMNSG 90
          +CQ +++ C   S MN G
Sbjct: 19 NCQTNDEDCTETSCMNGG 36


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.136    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,246
Number of Sequences: 317
Number of extensions: 2052
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 182
length of database: 114,650
effective HSP length: 53
effective length of query: 129
effective length of database: 97,849
effective search space: 12622521
effective search space used: 12622521
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 41 (20.6 bits)