Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000184-TA|BGIBMGA000184-PA|IPR010300|Cysteine
dioxygenase type I
(182 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23116| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_52091| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.42
SB_53810| Best HMM Match : DUF1542 (HMM E-Value=3.9) 31 0.42
SB_27754| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_20267| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_13894| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_16484| Best HMM Match : MSG (HMM E-Value=0.24) 31 0.74
SB_47646| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.98
SB_42413| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.98
SB_8371| Best HMM Match : Vicilin_N (HMM E-Value=0.11) 30 0.98
SB_53608| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_13892| Best HMM Match : Protamine_P2 (HMM E-Value=2) 29 1.7
SB_42316| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_10933| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_8229| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_51729| Best HMM Match : HABP4_PAI-RBP1 (HMM E-Value=1.2) 28 3.9
SB_48031| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_503| Best HMM Match : Y_phosphatase (HMM E-Value=0) 28 3.9
SB_54685| Best HMM Match : RFX_DNA_binding (HMM E-Value=1.2e-08) 28 5.2
SB_54030| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_56774| Best HMM Match : DNA_pol_viral_N (HMM E-Value=0.41) 28 5.2
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_52500| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6) 28 5.2
SB_42838| Best HMM Match : 7tm_1 (HMM E-Value=9.4e-39) 28 5.2
SB_41684| Best HMM Match : Ferric_reduct (HMM E-Value=0.00026) 28 5.2
SB_20262| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 28 5.2
SB_58410| Best HMM Match : Umbravirus_LDM (HMM E-Value=5.8) 27 6.9
SB_56863| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 27 6.9
SB_39941| Best HMM Match : PseudoU_synth_2 (HMM E-Value=1.1e-12) 27 6.9
SB_53217| Best HMM Match : RVT_1 (HMM E-Value=3.1e-13) 27 6.9
SB_46285| Best HMM Match : DM (HMM E-Value=4.7) 27 6.9
SB_43373| Best HMM Match : Herpes_UL3 (HMM E-Value=2.7) 27 6.9
SB_34422| Best HMM Match : Geminin (HMM E-Value=1.6) 27 6.9
SB_23150| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_16748| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95) 27 6.9
SB_1743| Best HMM Match : DUF563 (HMM E-Value=3.7) 27 6.9
SB_59548| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_58994| Best HMM Match : EGF_CA (HMM E-Value=2.3e-29) 27 9.1
SB_46127| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14) 27 9.1
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 27 9.1
SB_33941| Best HMM Match : 7tm_1 (HMM E-Value=0) 27 9.1
SB_15827| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_52178| Best HMM Match : Drf_FH1 (HMM E-Value=2.2) 27 9.1
SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39) 27 9.1
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_7912| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
>SB_23116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 31.9 bits (69), Expect = 0.32
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 50 KENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDED 95
K N N D + +N+ DY+D+ ++D +++ N+ ++DED
Sbjct: 125 KNNNNNNDDDDNNKNDNDDDYDDNNNNNDDYDDDNNNNNNDDDDED 170
Score = 30.3 bits (65), Expect = 0.98
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 44 EVLRTIKENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDEDYYD 98
E+L +N N +N D ND+ ++N++ D N + D+DY D
Sbjct: 93 EMLIDNDDNKNDSSNYDNNNYNNDNDNNDNNNKNNNNNNDDDDNNKNDNDDDYDD 147
>SB_52091| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1775
Score = 31.5 bits (68), Expect = 0.42
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 77 HNDSCQ-GDSHMNSGEEDEDYYDLKEIGRTRLEVNDVC-----YIN----DALGLHRMEN 126
+NDS + D + +G+ + +Y K G T + + C +IN D + L M
Sbjct: 774 NNDSIEVNDVLIVNGDLIQVHYRPKSYGYTTQQGHFTCKVKGLHINLRTADIVNLTSMLE 833
Query: 127 PSHVDGAVSLHLYCP-PFDSCRVFDARTGRPTQVKVTFWSMYGKKIKRVRRTFVF 180
HV+GAV+ + P+ R RT TF MY K+++R RT+ +
Sbjct: 834 LLHVEGAVAEERHVTLPYTIQRNVHDRTLHKVPAHNTFRVMYNKRVRRGMRTYPY 888
>SB_53810| Best HMM Match : DUF1542 (HMM E-Value=3.9)
Length = 560
Score = 31.5 bits (68), Expect = 0.42
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 36 DWPDDVQPEVLRTIKENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDS-----HMNSG 90
D DD+ + +N N GD N D++ + D +D R +D GD+ ++NS
Sbjct: 318 DDDDDINSDDDAADDDNIN-GDYNADDEDINGGDDDDDIYRDDDDINGDNDADDENINSD 376
Query: 91 E---EDEDYY 97
+ +D DYY
Sbjct: 377 DDAADDADYY 386
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 9/55 (16%)
Query: 51 ENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDS-----HMNSGE---EDEDYY 97
+N N GD N D++ + D +D R +D GD+ ++NS + +D DYY
Sbjct: 187 DNIN-GDYNADDEDINGGDDDDDIYRDDDDINGDNDADDENINSDDDAADDADYY 240
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 56 GDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEED 93
GD + D++ + S D +D +D+ GD G+ D
Sbjct: 429 GDDDADDENINSDDADDDHDDADDNINGDDDNIDGDND 466
>SB_27754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 31.1 bits (67), Expect = 0.56
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
Query: 54 NTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDEDYYDLKEIGRTRLEVNDVC 113
N GD D+ DY + D+ GD + G+ DED YD K+ G + +D
Sbjct: 24 NNGDDEDDDLDNTGDDYE-----YGDNV-GDGDDDDGDVDEDEYDKKDDG----DYDDDK 73
Query: 114 YINDALGLH 122
Y +D GLH
Sbjct: 74 YDSDDAGLH 82
>SB_20267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 31.1 bits (67), Expect = 0.56
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 51 ENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEED-EDYYD 98
+N + D N +N + D ND+ +++++ D++ N+G D D YD
Sbjct: 244 DNYDNNDNNDNNDNNDNNDNNDNNDKNDNNDNNDNYNNNGNNDNNDNYD 292
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 51 ENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDEDYYD 98
+N T D N +N + D ND+ N+ ++ N + D YD
Sbjct: 200 DNNGTNDNNDNNYNYDNNDNNDNDNNDNNDKNDNNDNNDNNGNNDNYD 247
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 51 ENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDEDYYD 98
+N + D N +N D ND+ +N++ G++ N ++ D YD
Sbjct: 253 DNNDNNDNNDNNDNNDKNDNNDNNDNYNNN--GNNDNNDNYDNNDNYD 298
>SB_13894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 30.7 bits (66), Expect = 0.74
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 52 NANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNS-GEEDEDYYDLKEIGRTRLEVN 110
NAN+GDQ + M D+ ++ D +GDS GEE E+ D + LE +
Sbjct: 34 NANSGDQLEVSDNAMEPKTADTVEKGGDVVEGDSTFEKPGEEGEEPDDDDDGDDNELEKS 93
Query: 111 D 111
D
Sbjct: 94 D 94
>SB_16484| Best HMM Match : MSG (HMM E-Value=0.24)
Length = 661
Score = 30.7 bits (66), Expect = 0.74
Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 2/107 (1%)
Query: 43 PEVLRTIKENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDEDYYDLKEI 102
P T ++ +C + S +DSCQ+ +SCQ + D + K+
Sbjct: 163 PSHSNTSSDSCKKRGNSCQDIPSHSNTSSDSCQKRGNSCQDIPSHSKQSSDGTIHVTKDK 222
Query: 103 GRTRLEVNDVCYINDALGLHRME--NPSHVDGAVSLHLYCPPFDSCR 147
+++ + N +G H + +PS H Y SC+
Sbjct: 223 EAITSSCDNLEHCNRKVGNHTKDKLHPSFTSYDNERHCYGKGVSSCK 269
>SB_47646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 30.3 bits (65), Expect = 0.98
Identities = 13/59 (22%), Positives = 28/59 (47%)
Query: 35 YDWPDDVQPEVLRTIKENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEED 93
YD+ DD + ++ +N + D++ +N DY+DS +N+ +N ++
Sbjct: 8 YDYDDDEHDDEIKEDNKNDDDIDEDSNNDDDDDVDYDDSYNNNNNGNNDHDDINDDNDN 66
>SB_42413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 30.3 bits (65), Expect = 0.98
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 10/84 (11%)
Query: 59 NCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDEDYYDLKEIGRTRLEVNDVCYINDA 118
N N+ + + + N+ C+GDSH N G+ D++ R+E + + A
Sbjct: 341 NKQNEDKIDEKNENEHNKLNEHCEGDSH-NEGKMDKE--------NERIEQKEDATKSGA 391
Query: 119 LGLHRMENPSHVDGAVSLHLYCPP 142
G H+ PSH+ G + PP
Sbjct: 392 SGSHQ-NTPSHIHGFKPSCPFTPP 414
>SB_8371| Best HMM Match : Vicilin_N (HMM E-Value=0.11)
Length = 323
Score = 30.3 bits (65), Expect = 0.98
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 40 DVQPEVLRTIKENANTGDQNCDNQTVMSTD--YNDSCQRHNDSCQGDSHMNSGEEDEDYY 97
D+ + +++NA + D D Q + + ND+ ++ D+C D + ++D+ Y
Sbjct: 135 DLASAEIDRLQDNAPSSDDALDIQNIKEENEKLNDTIRKLQDNCDNDDDDDDDDDDDADY 194
Query: 98 DLK 100
D K
Sbjct: 195 DDK 197
>SB_53608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/53 (22%), Positives = 26/53 (49%)
Query: 40 DVQPEVLRTIKENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEE 92
DVQ + I+E+ + GD + ++ + D+++ C ++ G M S +
Sbjct: 99 DVQKDTADLIEESFDDGDDDLLDKAMAEVDFDELCNKNELEATGSQSMTSSPQ 151
>SB_13892| Best HMM Match : Protamine_P2 (HMM E-Value=2)
Length = 228
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 52 NANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNS-GEEDEDYYDLKEIGRTRLEVN 110
NAN+GDQ + M D+ ++ D GD+ GEE E+ D ++ LE +
Sbjct: 17 NANSGDQPEVSDNAMEPKTADTVEKGGDVVAGDTTFEKPGEEGEEPDDDEDGDDNELEKS 76
Query: 111 D 111
D
Sbjct: 77 D 77
>SB_42316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 39 DDVQPEVLRTIKENANTG-DQNCDNQTVMSTDYNDSCQRHNDSCQG-----DSHMNSGEE 92
DDV + +N + G D + + V D+ D+ H+D+ G D H ++G++
Sbjct: 669 DDVDSDDGHDDNDNDDDGNDDDYGDDDVDDDDHVDNDDCHDDNDDGVDDDDDGHDDNGDD 728
Query: 93 DEDYYDLKEIG 103
D+D D+ + G
Sbjct: 729 DDDGNDVDDYG 739
>SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1938
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 16 VLLTINKATRRFITFS---LHRYDWPDDVQPEV---LRTIKENANTGDQNCDNQTVM 66
V+ T K TR+ T LH WPD PE+ + + + A T Q C N V+
Sbjct: 1807 VICTKLKVTRKKKTQEVCHLHHVSWPDKCIPELACSVLDLLDEAQTSQQQCGNAPVL 1863
>SB_10933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 472
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 133 AVSLHLYCPPFDSCRVFDARTG-------RPTQVKVTFWSMYGK 169
A+ LH C P DS R F+ R G P +KVTF S G+
Sbjct: 191 ALQLHKGCLPCDSLRYFNGRIGAFALLEATPKSLKVTFISERGR 234
>SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 41 VQPEVLRTIKENANTGDQNCDNQTVMSTDYN-DSCQRHNDSCQGDSHMNSGEEDEDYYDL 99
+ ++L ++ G + D+ + +D + DS HN+ D+ + G++D+D D+
Sbjct: 917 IAQKMLHRERDEGGEGYSDSDSDSDSDSDSDSDSDSHHNNDDDDDNGDDDGDDDDDAKDV 976
Query: 100 KEIGRTRLEVN 110
R + + N
Sbjct: 977 DNNNRVKNKGN 987
>SB_8229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 51 ENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDED 95
+N N D + DN D ++ HND+ + + N + D D
Sbjct: 62 DNDNDNDNDNDNDNDNDNDNDNDIDIHNDNDNDNDNDNDNDNDND 106
>SB_51729| Best HMM Match : HABP4_PAI-RBP1 (HMM E-Value=1.2)
Length = 519
Score = 28.3 bits (60), Expect = 3.9
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 117 DALGLHRMENPSHVDGAVSLHLYCP-PFDSCRVFDARTGRPTQVKVTFWSMYGKKIKRVR 175
D + L M V+GAV+ + P+ R RT TF ++Y K+++R
Sbjct: 452 DIVNLASMLELLRVEGAVAEERHVTLPYTIQRNVHDRTLHTVPAHKTFRAVYNKRVRRGM 511
Query: 176 RTFVFLK 182
RT+ + K
Sbjct: 512 RTYGYFK 518
>SB_48031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 52 NANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNS 89
N + GD + +N + +D N++ +DS GDS N+
Sbjct: 129 NTSNGDSDSNNTSNGDSDSNNTSNGDSDSSNGDSDSNN 166
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 52 NANTGDQNCDNQTVMSTDYNDSCQRHNDS---CQGDSHMNSGEEDED 95
NA GD + +N + +D N++ +DS GDS ++G+ D +
Sbjct: 119 NAGNGDSDSNNTSNGDSDSNNTSNGDSDSNNTSNGDSDSSNGDSDSN 165
>SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 51 ENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEED-EDYYD 98
+N + D N + + D ND+ ++++ DS+ N+G D D YD
Sbjct: 83 DNNDNNDNNDNYDNNGNNDNNDNYNNYDNNGNNDSNDNNGNNDNNDNYD 131
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/45 (24%), Positives = 24/45 (53%)
Query: 51 ENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDED 95
+N + D N +N + D ND+ ++++ D++ N+G D +
Sbjct: 59 DNYDNNDNNDNNDNNDNNDNNDNNDNNDNNDNNDNYDNNGNNDNN 103
>SB_503| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 979
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 32 LHRYDWPDDVQPEV---LRTIKENANTGDQNCDNQTVM 66
LH WPD PEV + + ++ T Q C N V+
Sbjct: 929 LHHVSWPDKCIPEVACSVLDLLDDVQTSQQQCGNAPVL 966
>SB_54685| Best HMM Match : RFX_DNA_binding (HMM E-Value=1.2e-08)
Length = 510
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 44 EVLRTIKENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGE 91
E LR + EN + C + VM T Y D C+++ + G + GE
Sbjct: 127 ETLRWLGENYELKEGMCLPRCVMYTHYLDFCKKNKLNPAGPATFGKGE 174
>SB_54030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 460
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 57 DQNCDNQTVMSTDYNDSCQRHNDS-CQGDSHMNSGEEDEDYYDLKEIGRTRLEVNDVCYI 115
D N DN D ND ++D+ D+ MN ++ D D+ ++ E ND+
Sbjct: 117 DMNDDNDMNDDNDMNDDNDMNDDNDMNDDNDMNDDNDNNDMNDMNDMNDENDE-NDMNDE 175
Query: 116 ND 117
ND
Sbjct: 176 ND 177
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/83 (20%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 36 DWPDDVQPEVLRTIKENANTGDQN-CDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDE 94
D DD + + + + D+N +++ M+ + +D+ ++ D+ MN +D
Sbjct: 147 DMNDDNDNNDMNDMNDMNDENDENDMNDENDMNNENDDNDMNDDNDMNDDNDMNDMNDDN 206
Query: 95 DYYDLKEIGRTRLEVNDVCYIND 117
D D+ + ++ND+ ND
Sbjct: 207 DMNDMND-DNDMNDMNDMDDDND 228
>SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 47 RTIKENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDED 95
+ I +N NT D N + ++D N++ +N S ++ N+ D +
Sbjct: 108 KNISDNNNTSDNNKTSDNNKTSDNNNTSDNNNTSDNNNTSDNNNTSDNN 156
>SB_56774| Best HMM Match : DNA_pol_viral_N (HMM E-Value=0.41)
Length = 886
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 52 NANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDED 95
N + GD+N ++ D +D +ND+ GD ++ ++D+D
Sbjct: 586 NYDGGDENDNDDDYYYYDDDDDDNDNNDADNGDDDNDNDDDDDD 629
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 51 ENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDEDYYDLKE 101
+N D + DN D ++ ND+ + + N + D D Y LK+
Sbjct: 3237 DNDIDNDNDIDNDNDNDNDNDNDNDNDNDNDNDNDNDNDNDNDNDSYKLKK 3287
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 51 ENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDED 95
+N N D + DN + D ++ ND+ + + N + D D
Sbjct: 3185 DNDNDNDNDNDNDNDIDNDNDNDIDNDNDNDNDNDNDNDNDNDND 3229
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 51 ENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDED 95
+N N D + DN + D ++ ND+ + + N + D D
Sbjct: 3231 DNDNDNDNDIDNDNDIDNDNDNDNDNDNDNDNDNDNDNDNDNDND 3275
>SB_52500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 303
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 151 ARTGRPTQVKVTFWSMYGKKIKRVRRTFV 179
A TG PTQ+++T+ S GKK R FV
Sbjct: 174 ALTGDPTQMRITWVSGTGKKCSMDRSFFV 202
>SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6)
Length = 557
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 16/61 (26%)
Query: 51 ENANTGDQNCDNQTV--------MSTDYNDSCQR--------HNDSCQGDSHMNSGEEDE 94
+ NTGD + + V M +D+N+SC HND + D N ++D+
Sbjct: 311 DEVNTGDSSSSEEEVESGLKDADMDSDHNNSCDDEDYDDDDVHNDDSENDDDENDDDDDD 370
Query: 95 D 95
D
Sbjct: 371 D 371
>SB_42838| Best HMM Match : 7tm_1 (HMM E-Value=9.4e-39)
Length = 747
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 1 MLYSFLNSSFRRSFKVLLTIN--KATRRFI 28
+LY+F +SS+RR F L T N KA R+ +
Sbjct: 591 VLYAFQSSSYRRGFAKLYTCNCLKARRQIV 620
>SB_41684| Best HMM Match : Ferric_reduct (HMM E-Value=0.00026)
Length = 177
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 36 DWPDDVQPEVLRTIKENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDED 95
+W + ++ E+ + + + CD+ + D +D ND G+ H +S + D+D
Sbjct: 92 NWVNPIRSEMSVGLCGICHDNNDGCDDNDRYNNDCDDGSD-DNDDNYGNDHCDSDDNDDD 150
>SB_20262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 51 ENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDED 95
+N N D N N + D ND+ ++++ DS+ N+ D +
Sbjct: 38 DNDNNNDNNDSNDNNGNNDNNDNNDNYDNNGNNDSNDNNDNNDNN 82
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 51 ENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDE-DYYD 98
+N + D N +N + D ND+ ++++ D++ N+ D D YD
Sbjct: 104 DNNDNNDNNDNNDNNGNNDNNDNNDNYDNNYNNDNNDNNDNNDNYDNYD 152
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 27.9 bits (59), Expect = 5.2
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 49 IKENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEE--DEDYYDLKEIGRTR 106
+++NAN D+ + + + D D +DS + + S +E D DY ++
Sbjct: 553 LEKNANGYDKKTEKKKLEKLDRKDGGNERSDSDDEEKDLESKDEENDIDYAMFRDKYLKN 612
Query: 107 LEVN----DVCYINDALGL-HRMENPSHVDG 132
+E+ +V D GL H + N ++ DG
Sbjct: 613 IEITKKTLEVVNTKDQDGLRHDLHNKNYDDG 643
>SB_58410| Best HMM Match : Umbravirus_LDM (HMM E-Value=5.8)
Length = 341
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/61 (21%), Positives = 26/61 (42%)
Query: 61 DNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDEDYYDLKEIGRTRLEVNDVCYINDALG 120
D+ + S D +D D D N +++ + I T ++ C++N+ LG
Sbjct: 3 DSGIINSGDADDDDDDDADDDDVDKDNNEDDDERMVVKIMMISMTSRRIDSYCHVNETLG 62
Query: 121 L 121
+
Sbjct: 63 V 63
>SB_56863| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4248
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 106 RLEVNDVCYINDALGLHRMENPSHVDGAVSLHLYCPPFDSCRVFDARTGRPT 157
R+E+ +A+G+ E+P++ A S Y P+D R++ RPT
Sbjct: 1342 RMELKGCSVTRNAIGMESFEHPNNKITASSYTRYQLPYDG-RLYHTNHWRPT 1392
>SB_39941| Best HMM Match : PseudoU_synth_2 (HMM E-Value=1.1e-12)
Length = 266
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 87 MNSGEEDEDYYDLKEIGRTRLEV 109
MN E+E+YY LK +G++ ++
Sbjct: 241 MNQSREEEEYYRLKRLGKSTKKI 263
>SB_53217| Best HMM Match : RVT_1 (HMM E-Value=3.1e-13)
Length = 436
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/60 (21%), Positives = 24/60 (40%)
Query: 80 SCQGDSHMNSGEEDEDYYDLKEIGRTRLEVNDVCYINDALGLHRMENPSHVDGAVSLHLY 139
SCQGD N ++ + Y++ + + + CY+ HR + H + Y
Sbjct: 2 SCQGDIPSNWDKQRLEDYEIATVLNKKEQQERECYLPTEAACHRCGSAEHAGNSCKYKKY 61
>SB_46285| Best HMM Match : DM (HMM E-Value=4.7)
Length = 233
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 54 NTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDEDYYD 98
N D+N D+ D +D N+ GD N +D+D D
Sbjct: 80 NDDDENDDDDNNDDDDNDDDDDDDNNDVDGDDDNNDNNKDDDNND 124
>SB_43373| Best HMM Match : Herpes_UL3 (HMM E-Value=2.7)
Length = 273
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 44 EVLRTIKENANTGDQNCD-NQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDE 94
E+ +N+N D + D N + D NDS H+ G ++ N+ + +E
Sbjct: 104 EIPEVHDDNSNDDDYSNDTNSNFVDNDDNDSSNSHSGDDSGSNYSNTCDFEE 155
>SB_34422| Best HMM Match : Geminin (HMM E-Value=1.6)
Length = 292
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 11 RRSFKVLLTINKATRRFITFSLHRYDWPDDVQPEVLRTIK 50
R S+K + I ++RF+ +LH +W + + E+LR ++
Sbjct: 139 RASWKSIQQIMNDSQRFVE-TLHHLNWKEGLSSEILRGVQ 177
>SB_23150| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1133
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 113 CYINDALGLHRMENPSHVDGAVSLHLYCP-PFDSCRVFDARTGRPTQVKVTFWSMYGKKI 171
C +D + + P V GAV+ + P+ R RT TF +Y K++
Sbjct: 1060 CLYHDTDSVIFLHRPPRVTGAVAEERHVTLPYTIQRNVHDRTLHTVLAHKTFRVVYNKRV 1119
Query: 172 KRVRRTFVF 180
+R RT+ +
Sbjct: 1120 RRGMRTYPY 1128
>SB_16748| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 72 DSCQRHNDSCQGDSHMNSGE-EDED 95
D C+ H++ CQ NSG +DED
Sbjct: 161 DKCENHDNECQSSPCKNSGTCKDED 185
>SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95)
Length = 1656
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 36 DWPDDVQPEVLRTIKENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDED 95
D D Q + KE++ D NCD+ D +D + D + D +EDED
Sbjct: 1197 DENDKKQGDADHEDKEDSGDQDNNCDDTENQDKDDDDDSK---DDDKDDDKDEDADEDED 1253
Query: 96 Y 96
+
Sbjct: 1254 H 1254
>SB_1743| Best HMM Match : DUF563 (HMM E-Value=3.7)
Length = 249
Score = 27.5 bits (58), Expect = 6.9
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 68 TDYNDSCQRHNDSCQGDSHMNSGEEDEDYYDLKEIG-RTRL--EVNDVCYINDALGLH-R 123
+DY+D +ND GD + G+ D+D D+ + R L EV I+ LH
Sbjct: 21 SDYDDD--DNNDDGGGDDYFADGKGDDDKDDVNLVDFRVSLHPEVALSLAIDSCASLHPE 78
Query: 124 MENPSHVDGAVSLH 137
+ P +D SLH
Sbjct: 79 VALPLSIDSRASLH 92
>SB_59548| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2835
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/66 (24%), Positives = 25/66 (37%)
Query: 33 HRYDWPDDVQPEVLRTIKENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEE 92
H D DD + ++ + D + D+ D ND ND D+ N +
Sbjct: 39 HNDDDDDDDNDSDNNNVDDDNDGNDDDDDSDEDYDDDDNDDNDDDNDDNDDDNDDNDDDN 98
Query: 93 DEDYYD 98
D+D D
Sbjct: 99 DDDDED 104
>SB_58994| Best HMM Match : EGF_CA (HMM E-Value=2.3e-29)
Length = 309
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/47 (23%), Positives = 22/47 (46%)
Query: 49 IKENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDED 95
+ EN N D + DN+ D ++ +DS + ++N + + D
Sbjct: 20 VNENDNDNDSDSDNENDDDNDSDNENDNDSDSDNENDNVNDSDNETD 66
>SB_46127| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 27 FITFSLHRYDWPDDVQPEVLRTIKENANTGDQNCDNQTVMSTDYNDSC--QRHNDSCQGD 84
F TF L R +V K++ ++ + DN + + D NDS NDS D
Sbjct: 105 FATFRLGRSSRGQEVGGRQCGDWKDDDDSAVDDDDNDSAVDDDDNDSAVDDDDNDSAVDD 164
Query: 85 SHMNSGEEDEDYYD 98
+ +D YD
Sbjct: 165 YKNGYDDNGDDGYD 178
>SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14)
Length = 966
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 54 NTGDQ-NCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDE 94
N GD N D D +DSC +D GD + N + D+
Sbjct: 409 NDGDGGNYDGNDDDDNDGDDSCNDDDDDDYGDDYDNDSDSDD 450
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Query: 37 WPDDVQPEVLRTIKENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDED 95
WP + P + R + + + GD DN + D D + H+D D N+ E+++D
Sbjct: 93 WPKKMLPRLERILMKKMSGGDDGSDNSYL---DNYDGHRLHDD----DDSDNNDEDNDD 144
>SB_33941| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 302
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 2 LYSFLNSSFRRSFKVLLTINK--ATRRFITFSLHRYD 36
+YSFLN FR +FK ++ N AT R + R D
Sbjct: 247 IYSFLNKDFRVAFKHIICCNNLVATARRMDLMFARSD 283
>SB_15827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 2 LYSFLNSSFRRSFKVLLTINKATRRFITFSLHRYD 36
+Y +N +FRR F + T NK T + F + YD
Sbjct: 214 IYGAMNRAFRREFIAIFTCNKRT-QITPFLWYCYD 247
>SB_52178| Best HMM Match : Drf_FH1 (HMM E-Value=2.2)
Length = 404
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 65 VMSTDYNDSCQRHNDSCQGDSHMNSGEEDED 95
V + DYND C ND D+ + +D+D
Sbjct: 338 VDAKDYNDDCGDANDGGDSDAASHGDPDDDD 368
>SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39)
Length = 1024
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 57 DQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDEDYYD 98
D N D++ V DY D ++D +++ + G D+D+ D
Sbjct: 53 DDNDDSRGVDGDDYTDDGSGNDDDNGDENYDDDGGSDDDHDD 94
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 52 NANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDED 95
NAN D N DN + + +D+ +N++ +++ N D +
Sbjct: 583 NANNNDNNSDNNDNNNDNNSDNNNNNNNNNNNNNNNNDNNSDNN 626
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 52 NANTGDQNCDNQTVMSTDYNDSCQRHNDSCQG-DSHMNSGEEDEDY 96
N N D N DN + ++D N N+S +G D + G+ E +
Sbjct: 619 NDNNSDNNSDNNSDNNSDNNSDNNNDNNSERGADPEIKRGKNPEGW 664
>SB_7912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1020
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 56 GDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEEDE 94
GD +CDN D +D+ R D G+ N G++D+
Sbjct: 15 GDDDCDNGDYEECDGDDNGDR--DDGVGNGDCNDGDDDD 51
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.136 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,721,467
Number of Sequences: 59808
Number of extensions: 298565
Number of successful extensions: 1584
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1352
Number of HSP's gapped (non-prelim): 251
length of query: 182
length of database: 16,821,457
effective HSP length: 78
effective length of query: 104
effective length of database: 12,156,433
effective search space: 1264269032
effective search space used: 1264269032
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)
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