GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000184-TA|BGIBMGA000184-PA|IPR010300|Cysteine
dioxygenase type I
         (182 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    29   0.020
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          25   0.33 
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    25   0.44 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.3  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   1.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   2.3  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    21   7.1  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 29.5 bits (63), Expect = 0.020
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 51  ENANTGDQNCDNQTVMSTDYN-DSCQRHNDSCQGDSHMNSGEEDED 95
           +N N  +QN +NQ   + + N  +  R ND+ Q D+  N   ++++
Sbjct: 433 DNQNADNQNANNQNADNQNANKQNGNRQNDNRQNDNKQNGNRQNDN 478



 Score = 27.5 bits (58), Expect = 0.082
 Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 52  NANTGDQNCDNQTVMSTDYND-SCQRHNDSCQGDSHMNSGEEDED 95
           N N G+QN DNQ   + + N+ +    N + Q  +  N   ++++
Sbjct: 424 NQNAGNQNADNQNADNQNANNQNADNQNANKQNGNRQNDNRQNDN 468


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 25.4 bits (53), Expect = 0.33
 Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 36  DW-PDDVQPEVLRTIKENANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGEED 93
           DW P+D +            T  +N +N T+ + + N +   +N++   +++ N+G  D
Sbjct: 198 DWQPEDEECTEATAGAVVLETCQRNSNNSTITAGNANTNASNNNNNNNNNNNNNNGAND 256



 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/40 (22%), Positives = 19/40 (47%)

Query: 52  NANTGDQNCDNQTVMSTDYNDSCQRHNDSCQGDSHMNSGE 91
           NANT   N +N    + + N+    + +     ++ N+G+
Sbjct: 232 NANTNASNNNNNNNNNNNNNNGANDNGNGNGASNNNNNGD 271


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query: 1   MLYSFLNSSFRRSFKVLLT 19
           ++YS  N+ FR +FK +LT
Sbjct: 323 IIYSIFNTEFREAFKRILT 341



 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 112 VCYINDALGLHRMENPSHVDGAVSLHLYC 140
           + ++  +LGLHR   P  +D +   H  C
Sbjct: 156 ISFVPISLGLHRANEPVVLDDSKEEHPTC 184


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 7/18 (38%), Positives = 15/18 (83%)

Query: 1   MLYSFLNSSFRRSFKVLL 18
           +LY+ +++ FR +FK++L
Sbjct: 346 LLYNIMSNKFREAFKLML 363


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 42  QPEVLRTIKENANTGDQNCDNQTVMSTDYNDS 73
           Q ++   I  N+ TG +N     V S DYN++
Sbjct: 167 QVKIPHDIAINSTTGKRNVVTPIVQSFDYNNT 198


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query: 1   MLYSFLNSSFRRSFKVLLTI 20
           ++Y+  N  +RR+F+ LL I
Sbjct: 379 LIYTIFNLDYRRAFRRLLRI 398


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/26 (30%), Positives = 14/26 (53%)

Query: 47  RTIKENANTGDQNCDNQTVMSTDYND 72
           +TI  N N  + N +N    + +YN+
Sbjct: 88  KTIHNNNNYNNNNYNNYNYNNNNYNN 113


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.136    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,602
Number of Sequences: 429
Number of extensions: 2385
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 182
length of database: 140,377
effective HSP length: 54
effective length of query: 128
effective length of database: 117,211
effective search space: 15003008
effective search space used: 15003008
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 41 (20.6 bits)